RNA–Protein interactions for RNA: ENST00000376646.3

VPS13A-206, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5 BASIC

Gene VPS13A, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-206ENST00000376646 SFT2D1Q8WV19 159 aa0.61□□□□□ -2.31
VPS13A-206ENST00000376646 SLAMF6Q96DU3 332 aa0.61□□□□□ -2.31
VPS13A-206ENST00000376646 PSTPIP2Q9H939 334 aa0.61□□□□□ -2.31
VPS13A-206ENST00000376646 BCL2L10Q9HD36 194 aa0.61□□□□□ -2.31
VPS13A-206ENST00000376646 HS3ST2Q9Y278 367 aa0.61□□□□□ -2.31
VPS13A-206ENST00000376646 ARL5AQ9Y689 179 aa0.61□□□□□ -2.31
VPS13A-206ENST00000376646 MYH7BA7E2Y1 1941 aa0.61□□□□□ -2.31
VPS13A-206ENST00000376646 POLEQ07864 2286 aa0.6□□□□□ -2.31
VPS13A-206ENST00000376646 PDE4DIPQ5VU43 2346 aa0.6□□□□□ -2.31
VPS13A-206ENST00000376646 FMN1Q68DA7 1419 aa0.6□□□□□ -2.31
VPS13A-206ENST00000376646 MIA2Q96PC5 1412 aa0.6□□□□□ -2.31
VPS13A-206ENST00000376646 TRAV12-1A0A0B4J245 112 aa0.6□□□□□ -2.31
VPS13A-206ENST00000376646 GEMIN2O14893 280 aaKnown RBP0.6□□□□□ -2.31
VPS13A-206ENST00000376646 HYPMO75409 117 aa0.6□□□□□ -2.31
VPS13A-206ENST00000376646 GADD45GO95257 159 aa0.6□□□□□ -2.31
VPS13A-206ENST00000376646 HSPE1P61604 102 aaKnown RBP0.6□□□□□ -2.31
VPS13A-206ENST00000376646 CTAG1AP78358 180 aa0.6□□□□□ -2.31
VPS13A-206ENST00000376646 RRN3P1Q2M238 152 aa0.6□□□□□ -2.31
VPS13A-206ENST00000376646 SOSTDC1Q6X4U4 206 aa0.6□□□□□ -2.31
VPS13A-206ENST00000376646 SLC30A7Q8NEW0 376 aa0.6□□□□□ -2.31
VPS13A-206ENST00000376646 CDC26Q8NHZ8 85 aa0.6□□□□□ -2.31
VPS13A-206ENST00000376646 PRADC1Q9BSG0 188 aa0.6□□□□□ -2.31
VPS13A-206ENST00000376646 C6orf62Q9GZU0 229 aaPredicted RBP0.6□□□□□ -2.31
VPS13A-206ENST00000376646 KLK9Q9UKQ9 250 aa0.6□□□□□ -2.31
VPS13A-206ENST00000376646 TAF1LQ8IZX4 1826 aa0.6□□□□□ -2.31
VPS13A-206ENST00000376646 SPG11Q96JI7 2443 aa0.6□□□□□ -2.31
VPS13A-206ENST00000376646 RYR3Q15413 4870 aa0.6□□□□□ -2.31
VPS13A-206ENST00000376646 EML6Q6ZMW3 1958 aa0.6□□□□□ -2.31
VPS13A-206ENST00000376646 EXPH5Q8NEV8 1989 aa0.6□□□□□ -2.31
VPS13A-206ENST00000376646 ARHGEF28Q8N1W1 1705 aaKnown RBP0.6□□□□□ -2.31
VPS13A-206ENST00000376646 OBSL1O75147 1896 aa0.59□□□□□ -2.31
VPS13A-206ENST00000376646 PDZD2O15018 2839 aa0.59□□□□□ -2.31
VPS13A-206ENST00000376646 ZANQ9Y493 2812 aa0.59□□□□□ -2.31
VPS13A-206ENST00000376646 IGKV2D-26A0A0A0MRZ7 120 aa0.59□□□□□ -2.31
VPS13A-206ENST00000376646 TRBV6-8A0A0A6YYG3 113 aa0.59□□□□□ -2.31
VPS13A-206ENST00000376646 TAX1BP3O14907 124 aa0.59□□□□□ -2.31
VPS13A-206ENST00000376646 TIMM17BO60830 172 aa0.59□□□□□ -2.31
VPS13A-206ENST00000376646 IFNA7P01567 189 aa0.59□□□□□ -2.31
VPS13A-206ENST00000376646 PLCXD2Q0VAA5 305 aa0.59□□□□□ -2.31
VPS13A-206ENST00000376646 DHRS4L2Q6PKH6 230 aa0.59□□□□□ -2.31
VPS13A-206ENST00000376646 CLECL1Q8IZS7 167 aa0.59□□□□□ -2.31
VPS13A-206ENST00000376646 MED29Q9NX70 200 aa0.59□□□□□ -2.31
VPS13A-206ENST00000376646 DENND4CQ5VZ89 1909 aa0.59□□□□□ -2.31
VPS13A-206ENST00000376646 NSD1Q96L73 2696 aaPredicted RBP0.59□□□□□ -2.31
VPS13A-206ENST00000376646 CREBBPQ92793 2442 aa0.59□□□□□ -2.31
VPS13A-206ENST00000376646 KMT2CQ8NEZ4 4911 aaKnown RBP0.59□□□□□ -2.31
VPS13A-206ENST00000376646 TNRC6BQ9UPQ9 1833 aaKnown RBP0.59□□□□□ -2.31
VPS13A-206ENST00000376646 CEP164Q9UPV0 1460 aa0.59□□□□□ -2.31
VPS13A-206ENST00000376646 BIRC6Q9NR09 4857 aa0.59□□□□□ -2.31
VPS13A-206ENST00000376646 DLG5Q8TDM6 1919 aa0.59□□□□□ -2.31
VPS13A-206ENST00000376646 CEP192Q8TEP8 1941 aa0.59□□□□□ -2.31
VPS13A-206ENST00000376646 ZNF292O60281 2723 aa0.59□□□□□ -2.31
VPS13A-206ENST00000376646 A0A087WX48 190 aa0.59□□□□□ -2.32
VPS13A-206ENST00000376646 BANF1O75531 89 aa0.59□□□□□ -2.32
VPS13A-206ENST00000376646 C1QBP02746 253 aa0.59□□□□□ -2.32
VPS13A-206ENST00000376646 PRB4P10163 310 aaPredicted RBP0.59□□□□□ -2.32
VPS13A-206ENST00000376646 NCALDP61601 193 aa0.59□□□□□ -2.32
VPS13A-206ENST00000376646 ARF6P62330 175 aa0.59□□□□□ -2.32
VPS13A-206ENST00000376646 BCL2L15Q5TBC7 163 aa0.59□□□□□ -2.32
VPS13A-206ENST00000376646 PDZD9Q8IXQ8 264 aa0.59□□□□□ -2.32
VPS13A-206ENST00000376646 C3orf56Q8N813 242 aa0.59□□□□□ -2.32
VPS13A-206ENST00000376646 ODF3Q96PU9 254 aa0.59□□□□□ -2.32
VPS13A-206ENST00000376646 IMUPQ9GZP8 106 aa0.59□□□□□ -2.32
VPS13A-206ENST00000376646 NBEAL2Q6ZNJ1 2754 aa0.59□□□□□ -2.32
VPS13A-206ENST00000376646 FLG2Q5D862 2391 aaPredicted RBP0.59□□□□□ -2.32
VPS13A-206ENST00000376646 MAP1BP46821 2468 aaKnown RBP0.59□□□□□ -2.32
VPS13A-206ENST00000376646 TRBV6-7A0A0A0MS04 114 aa0.58□□□□□ -2.32
VPS13A-206ENST00000376646 CCDC160A6NGH7 325 aa0.58□□□□□ -2.32
VPS13A-206ENST00000376646 NDUFB3O43676 98 aa0.58□□□□□ -2.32
VPS13A-206ENST00000376646 C22orf39Q6P5X5 142 aa0.58□□□□□ -2.32
VPS13A-206ENST00000376646 Q8IYB0 196 aa0.58□□□□□ -2.32
VPS13A-206ENST00000376646 TEX47Q8TBZ9 253 aa0.58□□□□□ -2.32
VPS13A-206ENST00000376646 OBSCN-AS1Q96MR7 158 aa0.58□□□□□ -2.32
VPS13A-206ENST00000376646 TMEM126AQ9H061 195 aa0.58□□□□□ -2.32
VPS13A-206ENST00000376646 C14orf132Q9NPU4 83 aa0.58□□□□□ -2.32
VPS13A-206ENST00000376646 ACER3Q9NUN7 267 aa0.58□□□□□ -2.32
VPS13A-206ENST00000376646 TECTAO75443 2155 aa0.58□□□□□ -2.32
VPS13A-206ENST00000376646 KDM5CP41229 1560 aa0.58□□□□□ -2.32
VPS13A-206ENST00000376646 SCN8AQ9UQD0 1980 aa0.58□□□□□ -2.32
VPS13A-206ENST00000376646 TRGV10A0A0A0MS01 117 aa0.58□□□□□ -2.32
VPS13A-206ENST00000376646 G3V2T6 193 aa0.58□□□□□ -2.32
VPS13A-206ENST00000376646 TMEM256-PLSCR3K7ERE1 68 aa0.58□□□□□ -2.32
VPS13A-206ENST00000376646 ATG12O94817 140 aa0.58□□□□□ -2.32
VPS13A-206ENST00000376646 CNBPP62633 177 aaKnown RBP0.58□□□□□ -2.32
VPS13A-206ENST00000376646 UBE2BP63146 152 aa0.58□□□□□ -2.32
VPS13A-206ENST00000376646 GNG5P63218 68 aa0.58□□□□□ -2.32
VPS13A-206ENST00000376646 C1orf137Q5JT78 98 aa0.58□□□□□ -2.32
VPS13A-206ENST00000376646 TEX261Q6UWH6 196 aa0.58□□□□□ -2.32
VPS13A-206ENST00000376646 EXOC3-AS1Q8N2X6 119 aa0.58□□□□□ -2.32
VPS13A-206ENST00000376646 ZNF418Q8TF45 676 aaPredicted RBP0.58□□□□□ -2.32
VPS13A-206ENST00000376646 RASL12Q9NYN1 266 aa0.58□□□□□ -2.32
VPS13A-206ENST00000376646 STOML2Q9UJZ1 356 aa0.58□□□□□ -2.32
VPS13A-206ENST00000376646 PYCARDQ9ULZ3 195 aa0.58□□□□□ -2.32
VPS13A-206ENST00000376646 C22orf24Q9Y442 160 aa0.58□□□□□ -2.32
VPS13A-206ENST00000376646 U3KQ87 197 aa0.58□□□□□ -2.32
VPS13A-206ENST00000376646 BSNQ9UPA5 3926 aa0.57□□□□□ -2.32
VPS13A-206ENST00000376646 M0R378 163 aa0.57□□□□□ -2.32
VPS13A-206ENST00000376646 TNRC18O15417 2968 aaPredicted RBP0.57□□□□□ -2.32
VPS13A-206ENST00000376646 RPL19P84098 196 aaKnown RBP0.57□□□□□ -2.32
VPS13A-206ENST00000376646 Q8N814 137 aa0.57□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms