RNA–Protein interactions for RNA: ENST00000376406.7

MDC1-201, Transcript of mediator of DNA damage checkpoint 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene MDC1, Length 7,576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-201ENST00000376406 RASL11AQ6T310 242 aa9.02□□□□□ -0.97
MDC1-201ENST00000376406 ETV2O00321 342 aaPredicted RBP9.02□□□□□ -0.97
MDC1-201ENST00000376406 OVOL1O14753 267 aa9.02□□□□□ -0.97
MDC1-201ENST00000376406 NEUROG1Q92886 237 aa9.02□□□□□ -0.97
MDC1-201ENST00000376406 C18orf15Q96N68 181 aa9.02□□□□□ -0.97
MDC1-201ENST00000376406 SCGB3A1Q96QR1 104 aa9.02□□□□□ -0.97
MDC1-201ENST00000376406 FABP5P3A8MUU1 101 aa9.02□□□□□ -0.97
MDC1-201ENST00000376406 CXCL1P09341 107 aa9.02□□□□□ -0.97
MDC1-201ENST00000376406 OR10W1Q8NGF6 305 aa9.02□□□□□ -0.97
MDC1-201ENST00000376406 MCRIP2Q9BUT9 160 aaKnown RBP9.02□□□□□ -0.97
MDC1-201ENST00000376406 ZNF256Q9Y2P7 627 aaPredicted RBP9.02□□□□□ -0.97
MDC1-201ENST00000376406 TRGV11A0A075B6L2 103 aa9.02□□□□□ -0.97
MDC1-201ENST00000376406 A0A1W2PRX2 142 aa9.02□□□□□ -0.97
MDC1-201ENST00000376406 OR11H12B2RN74 326 aa9.02□□□□□ -0.97
MDC1-201ENST00000376406 OR11H1Q8NG94 326 aa9.02□□□□□ -0.97
MDC1-201ENST00000376406 OR11H2Q8NH07 326 aa9.02□□□□□ -0.97
MDC1-201ENST00000376406 IGHV3OR16-13A0A075B7E8 117 aa9.01□□□□□ -0.97
MDC1-201ENST00000376406 IGHV3-74A0A0B4J1X5 117 aa9.01□□□□□ -0.97
MDC1-201ENST00000376406 TIMM23O14925 209 aa9.01□□□□□ -0.97
MDC1-201ENST00000376406 Q5PR19 223 aa9.01□□□□□ -0.97
MDC1-201ENST00000376406 ANAPC10Q9UM13 185 aa9.01□□□□□ -0.97
MDC1-201ENST00000376406 TRGV2A0A075B6R0 118 aa9.01□□□□□ -0.97
MDC1-201ENST00000376406 IGHV3-49A0A0A0MS15 119 aa9.01□□□□□ -0.97
MDC1-201ENST00000376406 TMEM262E9PQX1 116 aa9.01□□□□□ -0.97
MDC1-201ENST00000376406 ACTL10Q5JWF8 245 aa9.01□□□□□ -0.97
MDC1-201ENST00000376406 MBNL3Q9NUK0 354 aaKnown RBP9.01□□□□□ -0.97
MDC1-201ENST00000376406 ITGB1BP1O14713 200 aa9.01□□□□□ -0.97
MDC1-201ENST00000376406 FOXC2Q99958 501 aa9.01□□□□□ -0.97
MDC1-201ENST00000376406 HIST3H2BBQ8N257 126 aa9□□□□□ -0.97
MDC1-201ENST00000376406 DMRTA2Q96SC8 542 aa9□□□□□ -0.97
MDC1-201ENST00000376406 TRAV21A0A0B4J279 112 aa9□□□□□ -0.97
MDC1-201ENST00000376406 ERVK11-1P61568 191 aa9□□□□□ -0.97
MDC1-201ENST00000376406 TRGV9Q99603 122 aa9□□□□□ -0.97
MDC1-201ENST00000376406 PSG8Q9UQ74 426 aa9□□□□□ -0.97
MDC1-201ENST00000376406 LINC00614P0C842 121 aa9□□□□□ -0.97
MDC1-201ENST00000376406 GAFA1Q96PS6 74 aa9□□□□□ -0.97
MDC1-201ENST00000376406 HIST1H2BLQ99880 126 aa9□□□□□ -0.97
MDC1-201ENST00000376406 SSBP4Q9BWG4 385 aaPredicted RBP9□□□□□ -0.97
MDC1-201ENST00000376406 LY96Q9Y6Y9 160 aa9□□□□□ -0.97
MDC1-201ENST00000376406 FNDC10F2Z333 226 aa9□□□□□ -0.97
MDC1-201ENST00000376406 H3BRM9 83 aa9□□□□□ -0.97
MDC1-201ENST00000376406 TNFSF13O75888 250 aa9□□□□□ -0.97
MDC1-201ENST00000376406 IGKV3-20P01619 116 aa9□□□□□ -0.97
MDC1-201ENST00000376406 PCNX3Q9H6A9 2034 aa9□□□□□ -0.97
MDC1-201ENST00000376406 OR5AN1Q8NGI8 311 aa9□□□□□ -0.97
MDC1-201ENST00000376406 CLDN16Q9Y5I7 305 aa9□□□□□ -0.97
MDC1-201ENST00000376406 H0YJW9 148 aa8.99□□□□□ -0.97
MDC1-201ENST00000376406 PRDM13Q9H4Q3 707 aa8.99□□□□□ -0.97
MDC1-201ENST00000376406 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.99□□□□□ -0.97
MDC1-201ENST00000376406 PRTN3P24158 256 aa8.99□□□□□ -0.97
MDC1-201ENST00000376406 BEND2Q8NDZ0 799 aa8.99□□□□□ -0.97
MDC1-201ENST00000376406 ZCCHC24Q8N2G6 241 aaKnown RBP8.99□□□□□ -0.97
MDC1-201ENST00000376406 NCOR1P1Q9H4R4 102 aa8.99□□□□□ -0.97
MDC1-201ENST00000376406 PGPEP1LA6NFU8 196 aa8.99□□□□□ -0.97
MDC1-201ENST00000376406 CEACAM8P31997 349 aaPredicted RBP8.99□□□□□ -0.97
MDC1-201ENST00000376406 BDP1A6H8Y1 2624 aa8.99□□□□□ -0.97
MDC1-201ENST00000376406 F2Z2F3 143 aa8.99□□□□□ -0.97
MDC1-201ENST00000376406 NSUN5P1Q3KNT7 163 aa8.99□□□□□ -0.97
MDC1-201ENST00000376406 NDUFAF3Q9BU61 184 aa8.99□□□□□ -0.97
MDC1-201ENST00000376406 ZNF581Q9P0T4 197 aa8.99□□□□□ -0.97
MDC1-201ENST00000376406 IGHV1-3A0A0C4DH29 117 aa8.99□□□□□ -0.97
MDC1-201ENST00000376406 BUB1B-PAK6H3BSN5 160 aa8.99□□□□□ -0.97
MDC1-201ENST00000376406 HCFC1P51610 2035 aa8.99□□□□□ -0.97
MDC1-201ENST00000376406 TRAV8-6A0A0B4J262 113 aa8.98□□□□□ -0.97
MDC1-201ENST00000376406 MLNRO43193 412 aa8.98□□□□□ -0.97
MDC1-201ENST00000376406 AMBPP02760 352 aa8.98□□□□□ -0.97
MDC1-201ENST00000376406 HGFACQ04756 655 aa8.98□□□□□ -0.97
MDC1-201ENST00000376406 TCF15Q12870 199 aa8.98□□□□□ -0.97
MDC1-201ENST00000376406 TMEM170BQ5T4T1 132 aa8.98□□□□□ -0.97
MDC1-201ENST00000376406 ZNF474Q6S9Z5 364 aaPredicted RBP8.98□□□□□ -0.97
MDC1-201ENST00000376406 NUDT10Q8NFP7 164 aa8.98□□□□□ -0.97
MDC1-201ENST00000376406 NUDT11Q96G61 164 aa8.98□□□□□ -0.97
MDC1-201ENST00000376406 VGLL1Q99990 258 aa8.98□□□□□ -0.97
MDC1-201ENST00000376406 MUC21A0A0G2JKD1 596 aa8.98□□□□□ -0.97
MDC1-201ENST00000376406 MUC21A0A140T8X8 626 aa8.98□□□□□ -0.97
MDC1-201ENST00000376406 LINC00473A8K010 186 aa8.98□□□□□ -0.97
MDC1-201ENST00000376406 LINC00587B1AMM8 73 aa8.98□□□□□ -0.97
MDC1-201ENST00000376406 PPBPP02775 128 aa8.98□□□□□ -0.97
MDC1-201ENST00000376406 PRB3Q04118 309 aaPredicted RBP8.98□□□□□ -0.97
MDC1-201ENST00000376406 MUC21Q5SSG8 566 aa8.98□□□□□ -0.97
MDC1-201ENST00000376406 NIT1Q86X76 327 aa8.98□□□□□ -0.97
MDC1-201ENST00000376406 MRPL16Q9NX20 251 aaKnown RBP8.98□□□□□ -0.97
MDC1-201ENST00000376406 TRAV5A0A0B4J249 113 aa8.98□□□□□ -0.97
MDC1-201ENST00000376406 E7EQL1 145 aa8.98□□□□□ -0.97
MDC1-201ENST00000376406 GATA4P43694 442 aa8.98□□□□□ -0.97
MDC1-201ENST00000376406 UBE2E1P51965 193 aa8.98□□□□□ -0.97
MDC1-201ENST00000376406 C5orf64Q2M2E5 130 aa8.98□□□□□ -0.97
MDC1-201ENST00000376406 SIGLEC15Q6ZMC9 328 aa8.98□□□□□ -0.97
MDC1-201ENST00000376406 LINC01551Q86U37 167 aa8.98□□□□□ -0.97
MDC1-201ENST00000376406 RPP25LQ8N5L8 163 aaKnown RBP8.98□□□□□ -0.97
MDC1-201ENST00000376406 SPATA31B1PQ5VZV4 182 aa8.98□□□□□ -0.97
MDC1-201ENST00000376406 COQ2Q96H96 371 aa8.98□□□□□ -0.97
MDC1-201ENST00000376406 SRSF1Q07955 248 aaKnown RBP eCLIP8.98□□□□□ -0.976e-6■□□□□ 11
MDC1-201ENST00000376406 BPESC1Q9GZL8 116 aa8.98□□□□□ -0.97
MDC1-201ENST00000376406 TRAV9-2A0A087WT02 112 aa8.98□□□□□ -0.97
MDC1-201ENST00000376406 TRAV3A0A0B4J244 114 aa8.98□□□□□ -0.97
MDC1-201ENST00000376406 LY6G6EA0A0G2JKS1 128 aa8.98□□□□□ -0.97
MDC1-201ENST00000376406 H3BUX3 64 aa8.98□□□□□ -0.97
MDC1-201ENST00000376406 HBDP02042 147 aa8.98□□□□□ -0.97
MDC1-201ENST00000376406 SLC25A39Q9BZJ4 359 aaPredicted RBP8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms