RNA–Protein interactions for RNA: ENST00000376228.9

HLA-C-201, Transcript of major histocompatibility complex, class I, C, humanhuman

APPRIS P2 BASIC

Gene HLA-C, Length 1,536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-201ENST00000376228 VPREB3Q9UKI3 123 aa16.45■□□□□ 0.22
HLA-C-201ENST00000376228 AP4M1O00189 453 aa16.45■□□□□ 0.22
HLA-C-201ENST00000376228 PPIFP30405 207 aaKnown RBP16.45■□□□□ 0.22
HLA-C-201ENST00000376228 RHOGP84095 191 aa16.45■□□□□ 0.22
HLA-C-201ENST00000376228 LINC00305Q7Z4B0 112 aa16.45■□□□□ 0.22
HLA-C-201ENST00000376228 ZNF502Q8TBZ5 544 aa16.45■□□□□ 0.22
HLA-C-201ENST00000376228 SLC25A2Q9BXI2 301 aa16.45■□□□□ 0.22
HLA-C-201ENST00000376228 ZNF355PQ9NSJ1 428 aa16.45■□□□□ 0.22
HLA-C-201ENST00000376228 MRPL27Q9P0M9 148 aaKnown RBP16.45■□□□□ 0.22
HLA-C-201ENST00000376228 DOK5Q9P104 306 aa16.45■□□□□ 0.22
HLA-C-201ENST00000376228 WI2-2373I1.2A0A1W2PRP0 233 aa16.44■□□□□ 0.22
HLA-C-201ENST00000376228 C11orf94C9JXX5 98 aa16.44■□□□□ 0.22
HLA-C-201ENST00000376228 PDE6DO43924 150 aa16.44■□□□□ 0.22
HLA-C-201ENST00000376228 SCO1O75880 301 aa16.44■□□□□ 0.22
HLA-C-201ENST00000376228 OR2C1O95371 312 aa16.44■□□□□ 0.22
HLA-C-201ENST00000376228 ORM2P19652 201 aa16.44■□□□□ 0.22
HLA-C-201ENST00000376228 BLCAPP62952 87 aa16.44■□□□□ 0.22
HLA-C-201ENST00000376228 C9orf152Q5JTZ5 239 aa16.44■□□□□ 0.22
HLA-C-201ENST00000376228 OR1B1Q8NGR6 318 aa16.44■□□□□ 0.22
HLA-C-201ENST00000376228 FAM223BA6NKX1 122 aa16.43■□□□□ 0.22
HLA-C-201ENST00000376228 F6UZH7 168 aa16.43■□□□□ 0.22
HLA-C-201ENST00000376228 C15orf32Q32M92 178 aa16.43■□□□□ 0.22
HLA-C-201ENST00000376228 FAM74A3Q4VXF1 159 aa16.43■□□□□ 0.22
HLA-C-201ENST00000376228 Q56UQ5 140 aa16.43■□□□□ 0.22
HLA-C-201ENST00000376228 MORN5Q5VZ52 161 aa16.43■□□□□ 0.22
HLA-C-201ENST00000376228 FAM223AQ8IWN6 122 aa16.43■□□□□ 0.22
HLA-C-201ENST00000376228 ZNF491Q8N8L2 437 aa16.43■□□□□ 0.22
HLA-C-201ENST00000376228 HIGD1AQ9Y241 93 aa16.43■□□□□ 0.22
HLA-C-201ENST00000376228 TRBV7-1A0A0A6YYK4 115 aa16.42■□□□□ 0.22
HLA-C-201ENST00000376228 FAM74A7A6NL05 159 aa16.42■□□□□ 0.22
HLA-C-201ENST00000376228 OR7C2O60412 319 aa16.42■□□□□ 0.22
HLA-C-201ENST00000376228 CTSGP08311 255 aa16.42■□□□□ 0.22
HLA-C-201ENST00000376228 OR5AU1Q8NGC0 362 aa16.42■□□□□ 0.22
HLA-C-201ENST00000376228 OR4F5Q8NH21 305 aa16.42■□□□□ 0.22
HLA-C-201ENST00000376228 Q8WTZ3 238 aa16.42■□□□□ 0.22
HLA-C-201ENST00000376228 OR4F4Q96R69 305 aa16.42■□□□□ 0.22
HLA-C-201ENST00000376228 S100A7AQ86SG5 101 aa16.41■□□□□ 0.22
HLA-C-201ENST00000376228 EEF1AKMT3Q96AZ1 226 aa16.41■□□□□ 0.22
HLA-C-201ENST00000376228 UHRF2Q96PU4 802 aa16.41■□□□□ 0.22
HLA-C-201ENST00000376228 TRAV5A0A0B4J249 113 aa16.4■□□□□ 0.22
HLA-C-201ENST00000376228 A0A1W2PRE2 83 aa16.4■□□□□ 0.22
HLA-C-201ENST00000376228 H3BQ15 152 aa16.4■□□□□ 0.22
HLA-C-201ENST00000376228 UBE2G2P60604 165 aa16.4■□□□□ 0.22
HLA-C-201ENST00000376228 LYZP61626 148 aa16.4■□□□□ 0.22
HLA-C-201ENST00000376228 CST9LP1Q5W188 147 aa16.4■□□□□ 0.22
HLA-C-201ENST00000376228 RNF125Q96EQ8 232 aa16.4■□□□□ 0.22
HLA-C-201ENST00000376228 NIPSNAP3BQ9BS92 247 aa16.4■□□□□ 0.22
HLA-C-201ENST00000376228 PAXXQ9BUH6 204 aa16.4■□□□□ 0.22
HLA-C-201ENST00000376228 OR51M1Q9H341 326 aa16.4■□□□□ 0.22
HLA-C-201ENST00000376228 YTHDF2Q9Y5A9 579 aaKnown RBP16.4■□□□□ 0.22
HLA-C-201ENST00000376228 NDUFA7O95182 113 aa16.4■□□□□ 0.22
HLA-C-201ENST00000376228 ATP5G3P48201 142 aa16.4■□□□□ 0.22
HLA-C-201ENST00000376228 RPL15P61313 204 aaKnown RBP16.4■□□□□ 0.22
HLA-C-201ENST00000376228 CFHR3Q02985 330 aa16.4■□□□□ 0.22
HLA-C-201ENST00000376228 Q6ZSV7 163 aa16.4■□□□□ 0.22
HLA-C-201ENST00000376228 ZNF747Q9BV97 191 aa16.4■□□□□ 0.22
HLA-C-201ENST00000376228 S4R3C0 116 aa16.4■□□□□ 0.22
HLA-C-201ENST00000376228 NUPL2O15504 423 aaKnown RBP16.39■□□□□ 0.21
HLA-C-201ENST00000376228 IGLV1-40P01703 118 aa16.39■□□□□ 0.21
HLA-C-201ENST00000376228 ATP5G2Q06055 141 aa16.39■□□□□ 0.21
HLA-C-201ENST00000376228 PNRC1Q12796 327 aaPredicted RBP16.39■□□□□ 0.21
HLA-C-201ENST00000376228 RHEBQ15382 184 aa16.39■□□□□ 0.21
HLA-C-201ENST00000376228 TVP23CQ96ET8 276 aa16.39■□□□□ 0.21
HLA-C-201ENST00000376228 USMG5Q96IX5 58 aa16.39■□□□□ 0.21
HLA-C-201ENST00000376228 SLC25A39Q9BZJ4 359 aaPredicted RBP16.39■□□□□ 0.21
HLA-C-201ENST00000376228 TMEM14CQ9P0S9 112 aa16.39■□□□□ 0.21
HLA-C-201ENST00000376228 ADMP35318 185 aa16.38■□□□□ 0.21
HLA-C-201ENST00000376228 CEBPGP53567 150 aa16.38■□□□□ 0.21
HLA-C-201ENST00000376228 ZNF600Q6ZNG1 722 aa16.38■□□□□ 0.21
HLA-C-201ENST00000376228 Q6ZS46 218 aa16.38■□□□□ 0.21
HLA-C-201ENST00000376228 C11orf52Q96A22 123 aa16.38■□□□□ 0.21
HLA-C-201ENST00000376228 FXYD5Q96DB9 178 aa16.38■□□□□ 0.21
HLA-C-201ENST00000376228 SHANK2-AS3Q9BTD1 123 aa16.38■□□□□ 0.21
HLA-C-201ENST00000376228 PUS1Q9Y606 427 aaKnown RBP eCLIP16.38■□□□□ 0.21
HLA-C-201ENST00000376228 OR2T8A6NH00 312 aa16.37■□□□□ 0.21
HLA-C-201ENST00000376228 ZNF727A8MUV8 499 aa16.37■□□□□ 0.21
HLA-C-201ENST00000376228 H3BRN7 92 aa16.37■□□□□ 0.21
HLA-C-201ENST00000376228 DNASE2O00115 360 aaPredicted RBP16.37■□□□□ 0.21
HLA-C-201ENST00000376228 IL4P05112 153 aa16.37■□□□□ 0.21
HLA-C-201ENST00000376228 UBE2L3P68036 154 aaKnown RBP16.37■□□□□ 0.21
HLA-C-201ENST00000376228 BTN1A1Q13410 526 aa16.37■□□□□ 0.21
HLA-C-201ENST00000376228 ZNF343Q6P1L6 599 aa16.37■□□□□ 0.21
HLA-C-201ENST00000376228 LINC01006Q8NI28 216 aa16.37■□□□□ 0.21
HLA-C-201ENST00000376228 CCDC140Q96MF4 163 aa16.37■□□□□ 0.21
HLA-C-201ENST00000376228 CHRDL1Q9BU40 450 aa16.37■□□□□ 0.21
HLA-C-201ENST00000376228 PARLQ9H300 379 aa16.37■□□□□ 0.21
HLA-C-201ENST00000376228 LINC00527Q9UJ94 153 aa16.37■□□□□ 0.21
HLA-C-201ENST00000376228 RNF24Q9Y225 148 aa16.37■□□□□ 0.21
HLA-C-201ENST00000376228 TRGV3P03979 118 aa16.36■□□□□ 0.21
HLA-C-201ENST00000376228 NPPCP23582 126 aa16.36■□□□□ 0.21
HLA-C-201ENST00000376228 NOL4LQ96MY1 436 aaPredicted RBP16.36■□□□□ 0.21
HLA-C-201ENST00000376228 MS4A10Q96PG2 267 aa16.36■□□□□ 0.21
HLA-C-201ENST00000376228 SMIM7Q9BQ49 75 aa16.36■□□□□ 0.21
HLA-C-201ENST00000376228 SDF2L1Q9HCN8 221 aa16.36■□□□□ 0.21
HLA-C-201ENST00000376228 CLPSL1A2RUU4 121 aa16.35■□□□□ 0.21
HLA-C-201ENST00000376228 C7orf77A4D0Y5 90 aa16.35■□□□□ 0.21
HLA-C-201ENST00000376228 B4DEV8 164 aa16.35■□□□□ 0.21
HLA-C-201ENST00000376228 IGHV3-23P01764 117 aa16.35■□□□□ 0.21
HLA-C-201ENST00000376228 CLEC3BP05452 202 aa16.35■□□□□ 0.21
HLA-C-201ENST00000376228 OR10J4P0C629 311 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms