RNA–Protein interactions for RNA: ENST00000375167.1

H2AFX-201, Transcript of H2A histone family member X, humanhuman

TSL 2

Gene H2AFX, Length 1,373 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFX-201ENST00000375167 UBAC2Q8NBM4 344 aa12.39□□□□□ -0.43
H2AFX-201ENST00000375167 ATG101Q9BSB4 218 aa12.39□□□□□ -0.43
H2AFX-201ENST00000375167 MDFICQ9P1T7 246 aa12.39□□□□□ -0.43
H2AFX-201ENST00000375167 U3KQ87 197 aa12.39□□□□□ -0.43
H2AFX-201ENST00000375167 K7EMT4 169 aa12.38□□□□□ -0.43
H2AFX-201ENST00000375167 NDUFA4O00483 81 aa12.38□□□□□ -0.43
H2AFX-201ENST00000375167 SCGB2A1O75556 95 aa12.38□□□□□ -0.43
H2AFX-201ENST00000375167 PVALBP20472 110 aaPredicted RBP12.38□□□□□ -0.43
H2AFX-201ENST00000375167 XGP55808 180 aa12.38□□□□□ -0.43
H2AFX-201ENST00000375167 PAFAH1B2P68402 229 aa12.38□□□□□ -0.43
H2AFX-201ENST00000375167 C2orf83Q53S99 150 aa12.38□□□□□ -0.43
H2AFX-201ENST00000375167 GBGT1Q8N5D6 347 aa12.38□□□□□ -0.43
H2AFX-201ENST00000375167 SLC24A4Q8NFF2 622 aa12.38□□□□□ -0.43
H2AFX-201ENST00000375167 DTD1Q8TEA8 209 aa12.38□□□□□ -0.43
H2AFX-201ENST00000375167 C2orf50Q96LR7 162 aa12.38□□□□□ -0.43
H2AFX-201ENST00000375167 RBKSQ9H477 322 aa12.38□□□□□ -0.43
H2AFX-201ENST00000375167 GSKIPQ9P0R6 139 aa12.38□□□□□ -0.43
H2AFX-201ENST00000375167 IGHV3OR16-8A0A075B7F1 116 aa12.37□□□□□ -0.43
H2AFX-201ENST00000375167 DFFBO76075 338 aa12.37□□□□□ -0.43
H2AFX-201ENST00000375167 IGHV3-48P01763 117 aa12.37□□□□□ -0.43
H2AFX-201ENST00000375167 CTSGP08311 255 aa12.37□□□□□ -0.43
H2AFX-201ENST00000375167 PET100P0DJ07 73 aa12.37□□□□□ -0.43
H2AFX-201ENST00000375167 C4BPBP20851 252 aa12.37□□□□□ -0.43
H2AFX-201ENST00000375167 DEFB131AP59861 70 aa12.37□□□□□ -0.43
H2AFX-201ENST00000375167 RAB11AP62491 216 aa12.37□□□□□ -0.43
H2AFX-201ENST00000375167 ASB13Q8WXK3 278 aa12.37□□□□□ -0.43
H2AFX-201ENST00000375167 MED28Q9H204 178 aa12.37□□□□□ -0.43
H2AFX-201ENST00000375167 SMPXQ9UHP9 88 aa12.37□□□□□ -0.43
H2AFX-201ENST00000375167 PLA2G2DQ9UNK4 145 aa12.37□□□□□ -0.43
H2AFX-201ENST00000375167 NUPL2O15504 423 aaKnown RBP12.36□□□□□ -0.43
H2AFX-201ENST00000375167 SYNGR2O43760 224 aa12.36□□□□□ -0.43
H2AFX-201ENST00000375167 NPBWR1P48145 328 aa12.36□□□□□ -0.43
H2AFX-201ENST00000375167 Q6ZSN1 163 aa12.36□□□□□ -0.43
H2AFX-201ENST00000375167 RNASEH2CQ8TDP1 164 aaKnown RBP12.36□□□□□ -0.43
H2AFX-201ENST00000375167 RAB40CQ96S21 281 aa12.36□□□□□ -0.43
H2AFX-201ENST00000375167 RPS10-NUDT3A0A1W2PQS6 291 aa12.35□□□□□ -0.43
H2AFX-201ENST00000375167 C15orf62A8K5M9 175 aa12.35□□□□□ -0.43
H2AFX-201ENST00000375167 FAM229AH3BQW9 127 aa12.35□□□□□ -0.43
H2AFX-201ENST00000375167 GOSR2O14653 212 aa12.35□□□□□ -0.43
H2AFX-201ENST00000375167 GNG7O60262 68 aa12.35□□□□□ -0.43
H2AFX-201ENST00000375167 RLN2P04090 185 aa12.35□□□□□ -0.43
H2AFX-201ENST00000375167 SPART-AS1P0CW21 52 aa12.35□□□□□ -0.43
H2AFX-201ENST00000375167 OPRK1P41145 380 aa12.35□□□□□ -0.43
H2AFX-201ENST00000375167 ZBTB8BQ8NAP8 495 aaPredicted RBP12.35□□□□□ -0.43
H2AFX-201ENST00000375167 TMEM170AQ8WVE7 144 aa12.35□□□□□ -0.43
H2AFX-201ENST00000375167 C17orf77Q96MU5 243 aa12.35□□□□□ -0.43
H2AFX-201ENST00000375167 RHPN1-AS1Q9BWJ2 59 aa12.35□□□□□ -0.43
H2AFX-201ENST00000375167 NMES1Q9C002 83 aa12.35□□□□□ -0.43
H2AFX-201ENST00000375167 FNDC4Q9H6D8 234 aaPredicted RBP12.35□□□□□ -0.43
H2AFX-201ENST00000375167 CLEC5AQ9NY25 188 aa12.35□□□□□ -0.43
H2AFX-201ENST00000375167 ALG5Q9Y673 324 aa12.35□□□□□ -0.43
H2AFX-201ENST00000375167 L7N2F9 121 aa12.34□□□□□ -0.43
H2AFX-201ENST00000375167 CHEK1O14757 476 aa12.34□□□□□ -0.43
H2AFX-201ENST00000375167 SCGB1D2O95969 90 aa12.34□□□□□ -0.43
H2AFX-201ENST00000375167 BTF3P20290 206 aaKnown RBP12.34□□□□□ -0.43
H2AFX-201ENST00000375167 VAMP2P63027 116 aa12.34□□□□□ -0.43
H2AFX-201ENST00000375167 ID3Q02535 119 aa12.34□□□□□ -0.43
H2AFX-201ENST00000375167 RELQ04864 619 aaPredicted RBP12.34□□□□□ -0.43
H2AFX-201ENST00000375167 ETFRF1Q6IPR1 90 aa12.34□□□□□ -0.43
H2AFX-201ENST00000375167 TRPT1Q86TN4 253 aaKnown RBP12.34□□□□□ -0.43
H2AFX-201ENST00000375167 OR4D5Q8NGN0 318 aa12.34□□□□□ -0.43
H2AFX-201ENST00000375167 ZNRF2Q8NHG8 242 aa12.34□□□□□ -0.43
H2AFX-201ENST00000375167 IGHV7-4-1A0A0J9YVY3 117 aa12.33□□□□□ -0.44
H2AFX-201ENST00000375167 TMEM50AO95807 157 aa12.33□□□□□ -0.44
H2AFX-201ENST00000375167 HTN3P15516 51 aa12.33□□□□□ -0.44
H2AFX-201ENST00000375167 TAS2R30P59541 319 aa12.33□□□□□ -0.44
H2AFX-201ENST00000375167 MLANAQ16655 118 aa12.33□□□□□ -0.44
H2AFX-201ENST00000375167 TMEM116Q8NCL8 245 aa12.33□□□□□ -0.44
H2AFX-201ENST00000375167 OR4X1Q8NH49 305 aa12.33□□□□□ -0.44
H2AFX-201ENST00000375167 OR10C1Q96KK4 312 aa12.33□□□□□ -0.44
H2AFX-201ENST00000375167 MGAT4CQ9UBM8 478 aa12.33□□□□□ -0.44
H2AFX-201ENST00000375167 CCSO14618 274 aa12.32□□□□□ -0.44
H2AFX-201ENST00000375167 SLC25A4P12235 298 aa12.32□□□□□ -0.44
H2AFX-201ENST00000375167 TMEM88Q6PEY1 159 aa12.32□□□□□ -0.44
H2AFX-201ENST00000375167 Q6ZNX1 250 aa12.32□□□□□ -0.44
H2AFX-201ENST00000375167 MAGT1Q9H0U3 335 aa12.32□□□□□ -0.44
H2AFX-201ENST00000375167 KRTAP29-1A8MX34 341 aaPredicted RBP12.31□□□□□ -0.44
H2AFX-201ENST00000375167 SSSCA1O60232 199 aa12.31□□□□□ -0.44
H2AFX-201ENST00000375167 CLN5O75503 358 aa12.31□□□□□ -0.44
H2AFX-201ENST00000375167 SMR3BP02814 79 aaPredicted RBP12.31□□□□□ -0.44
H2AFX-201ENST00000375167 IAPPP10997 89 aa12.31□□□□□ -0.44
H2AFX-201ENST00000375167 FGL1Q08830 312 aa12.31□□□□□ -0.44
H2AFX-201ENST00000375167 PRSS54Q6PEW0 395 aa12.31□□□□□ -0.44
H2AFX-201ENST00000375167 C15orf53Q8NAA6 179 aa12.31□□□□□ -0.44
H2AFX-201ENST00000375167 CSNK1G2-AS1Q8NCQ2 148 aa12.31□□□□□ -0.44
H2AFX-201ENST00000375167 MRPL36Q9P0J6 103 aaKnown RBP12.31□□□□□ -0.44
H2AFX-201ENST00000375167 STRAPQ9Y3F4 350 aaKnown RBP12.31□□□□□ -0.44
H2AFX-201ENST00000375167 TRAV30A0A087WSZ9 112 aa12.3□□□□□ -0.44
H2AFX-201ENST00000375167 IGHV3-49A0A0A0MS15 119 aa12.3□□□□□ -0.44
H2AFX-201ENST00000375167 DNASE2O00115 360 aaPredicted RBP12.3□□□□□ -0.44
H2AFX-201ENST00000375167 TSC22D2O75157 780 aa12.3□□□□□ -0.44
H2AFX-201ENST00000375167 YIF1AO95070 293 aa12.3□□□□□ -0.44
H2AFX-201ENST00000375167 CD5P06127 495 aa12.3□□□□□ -0.44
H2AFX-201ENST00000375167 S100A10P60903 97 aa12.3□□□□□ -0.44
H2AFX-201ENST00000375167 RRAS2P62070 204 aaPredicted RBP12.3□□□□□ -0.44
H2AFX-201ENST00000375167 FAM90A2PQ658T7 463 aa12.3□□□□□ -0.44
H2AFX-201ENST00000375167 ZNF414Q96IQ9 312 aa12.3□□□□□ -0.44
H2AFX-201ENST00000375167 SMIM8Q96KF7 97 aa12.3□□□□□ -0.44
H2AFX-201ENST00000375167 TEX48A0A1B0GUV7 120 aa12.3□□□□□ -0.44
H2AFX-201ENST00000375167 A0A1B0GVG6 124 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms