RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 SSMEM1Q8WWF3 244 aa3.8□□□□□ -1.8
USP48-202ENST00000374730 CACNG8Q8WXS5 425 aa3.8□□□□□ -1.8
USP48-202ENST00000374730 RND1Q92730 232 aa3.8□□□□□ -1.8
USP48-202ENST00000374730 FRZBQ92765 325 aa3.8□□□□□ -1.8
USP48-202ENST00000374730 TNFRSF14Q92956 283 aa3.8□□□□□ -1.8
USP48-202ENST00000374730 ST6GALNAC6Q969X2 333 aa3.8□□□□□ -1.8
USP48-202ENST00000374730 NABP2Q9BQ15 211 aa3.8□□□□□ -1.8
USP48-202ENST00000374730 C19orf24Q9BVV8 132 aa3.8□□□□□ -1.8
USP48-202ENST00000374730 MRPL20Q9BYC9 149 aaKnown RBP3.8□□□□□ -1.8
USP48-202ENST00000374730 OR51M1Q9H341 326 aa3.8□□□□□ -1.8
USP48-202ENST00000374730 PATZ1Q9HBE1 687 aaKnown RBP3.8□□□□□ -1.8
USP48-202ENST00000374730 DYNLRB1Q9NP97 96 aa3.8□□□□□ -1.8
USP48-202ENST00000374730 NDUFA4L2Q9NRX3 87 aa3.8□□□□□ -1.8
USP48-202ENST00000374730 TMEM167BQ9NRX6 74 aa3.8□□□□□ -1.8
USP48-202ENST00000374730 CTSZQ9UBR2 303 aa3.8□□□□□ -1.8
USP48-202ENST00000374730 FUT9Q9Y231 359 aa3.8□□□□□ -1.8
USP48-202ENST00000374730 LY96Q9Y6Y9 160 aa3.8□□□□□ -1.8
USP48-202ENST00000374730 MALRD1Q5VYJ5 2156 aa3.8□□□□□ -1.8
USP48-202ENST00000374730 FAM208BQ5VWN6 2430 aa3.79□□□□□ -1.8
USP48-202ENST00000374730 TRAV9-1A0A075B6T8 112 aa3.79□□□□□ -1.8
USP48-202ENST00000374730 MDFIC2A0A1B0GVS7 189 aa3.79□□□□□ -1.8
USP48-202ENST00000374730 hDV102S1A0JD36 115 aa3.79□□□□□ -1.8
USP48-202ENST00000374730 PCP4L1A6NKN8 68 aa3.79□□□□□ -1.8
USP48-202ENST00000374730 PPP5D1E7EU14 171 aa3.79□□□□□ -1.8
USP48-202ENST00000374730 M0QZ24 198 aa3.79□□□□□ -1.8
USP48-202ENST00000374730 DVL1O14640 695 aa3.79□□□□□ -1.8
USP48-202ENST00000374730 RBP4P02753 201 aa3.79□□□□□ -1.8
USP48-202ENST00000374730 OR5G3P0C626 314 aa3.79□□□□□ -1.8
USP48-202ENST00000374730 S100A2P29034 98 aa3.79□□□□□ -1.8
USP48-202ENST00000374730 UCNP55089 124 aa3.79□□□□□ -1.8
USP48-202ENST00000374730 UBE2G2P60604 165 aa3.79□□□□□ -1.8
USP48-202ENST00000374730 RPL8P62917 257 aaKnown RBP3.79□□□□□ -1.8
USP48-202ENST00000374730 ERHP84090 104 aaKnown RBP3.79□□□□□ -1.8
USP48-202ENST00000374730 PAX2Q02962 417 aa3.79□□□□□ -1.8
USP48-202ENST00000374730 HLA-DRB5Q30154 266 aa3.79□□□□□ -1.8
USP48-202ENST00000374730 PRR30Q53SZ7 412 aaPredicted RBP3.79□□□□□ -1.8
USP48-202ENST00000374730 ACTL10Q5JWF8 245 aa3.79□□□□□ -1.8
USP48-202ENST00000374730 SPATA31B1PQ5VZV4 182 aa3.79□□□□□ -1.8
USP48-202ENST00000374730 PVRIGQ6DKI7 326 aa3.79□□□□□ -1.8
USP48-202ENST00000374730 LYPD2Q6UXB3 125 aa3.79□□□□□ -1.8
USP48-202ENST00000374730 TGIF2LXQ8IUE1 241 aa3.79□□□□□ -1.8
USP48-202ENST00000374730 THAP8Q8NA92 274 aa3.79□□□□□ -1.8
USP48-202ENST00000374730 OR4C13Q8NGP0 309 aa3.79□□□□□ -1.8
USP48-202ENST00000374730 OR10X1Q8NGY0 326 aa3.79□□□□□ -1.8
USP48-202ENST00000374730 OR2T10Q8NGZ9 312 aa3.79□□□□□ -1.8
USP48-202ENST00000374730 OR4X1Q8NH49 305 aa3.79□□□□□ -1.8
USP48-202ENST00000374730 RNASEH2CQ8TDP1 164 aaKnown RBP3.79□□□□□ -1.8
USP48-202ENST00000374730 FLYWCH2Q96CP2 140 aaKnown RBP3.79□□□□□ -1.8
USP48-202ENST00000374730 ACY3Q96HD9 319 aa3.79□□□□□ -1.8
USP48-202ENST00000374730 WFIKKN1Q96NZ8 548 aa3.79□□□□□ -1.8
USP48-202ENST00000374730 UHRF2Q96PU4 802 aa3.79□□□□□ -1.8
USP48-202ENST00000374730 RNF2Q99496 336 aa3.79□□□□□ -1.8
USP48-202ENST00000374730 HINT2Q9BX68 163 aa3.79□□□□□ -1.8
USP48-202ENST00000374730 MRPL32Q9BYC8 188 aaKnown RBP3.79□□□□□ -1.8
USP48-202ENST00000374730 COMMD5Q9GZQ3 224 aa3.79□□□□□ -1.8
USP48-202ENST00000374730 NIT2Q9NQR4 276 aa3.79□□□□□ -1.8
USP48-202ENST00000374730 TECRQ9NZ01 308 aaKnown RBP3.79□□□□□ -1.8
USP48-202ENST00000374730 ZNRD1Q9P1U0 126 aa3.79□□□□□ -1.8
USP48-202ENST00000374730 PITPNC1Q9UKF7 332 aa3.79□□□□□ -1.8
USP48-202ENST00000374730 WASHC3Q9Y3C0 194 aa3.79□□□□□ -1.8
USP48-202ENST00000374730 YTHDF2Q9Y5A9 579 aaKnown RBP3.79□□□□□ -1.8
USP48-202ENST00000374730 USP9XQ93008 2570 aaPredicted RBP3.79□□□□□ -1.8
USP48-202ENST00000374730 TRBV20OR9-2A0A075B6H5 130 aa3.78□□□□□ -1.8
USP48-202ENST00000374730 IGKV1OR2-108A0A075B7D4 117 aa3.78□□□□□ -1.8
USP48-202ENST00000374730 IGHV1-69-2A0A0G2JMI3 117 aa3.78□□□□□ -1.8
USP48-202ENST00000374730 A0A1W2PRE2 83 aa3.78□□□□□ -1.8
USP48-202ENST00000374730 PSMB11A5LHX3 300 aa3.78□□□□□ -1.8
USP48-202ENST00000374730 IGLV2-23P01705 113 aa3.78□□□□□ -1.8
USP48-202ENST00000374730 FABP1P07148 127 aa3.78□□□□□ -1.8
USP48-202ENST00000374730 SOD3P08294 240 aa3.78□□□□□ -1.8
USP48-202ENST00000374730 IGHV1-8P0DP01 117 aa3.78□□□□□ -1.8
USP48-202ENST00000374730 CHRNB4P30926 498 aa3.78□□□□□ -1.8
USP48-202ENST00000374730 OR10J1P30954 320 aa3.78□□□□□ -1.8
USP48-202ENST00000374730 CA7P43166 264 aa3.78□□□□□ -1.8
USP48-202ENST00000374730 LGALS7P47929 136 aa3.78□□□□□ -1.8
USP48-202ENST00000374730 PPOXP50336 477 aa3.78□□□□□ -1.8
USP48-202ENST00000374730 SUB1P53999 127 aaKnown RBP eCLIP3.78□□□□□ -1.8
USP48-202ENST00000374730 TAS2R45P59539 299 aa3.78□□□□□ -1.8
USP48-202ENST00000374730 SCGB2A2Q13296 93 aa3.78□□□□□ -1.8
USP48-202ENST00000374730 VMA21Q3ZAQ7 101 aa3.78□□□□□ -1.8
USP48-202ENST00000374730 FAM78BQ5VT40 261 aa3.78□□□□□ -1.8
USP48-202ENST00000374730 HIST2H2BCQ6DN03 193 aa3.78□□□□□ -1.8
USP48-202ENST00000374730 HIST2H2BDQ6DRA6 164 aa3.78□□□□□ -1.8
USP48-202ENST00000374730 MIR17HGQ75NE6 70 aa3.78□□□□□ -1.8
USP48-202ENST00000374730 TMEM183AQ8IXX5 376 aa3.78□□□□□ -1.8
USP48-202ENST00000374730 ZCCHC24Q8N2G6 241 aaKnown RBP3.78□□□□□ -1.8
USP48-202ENST00000374730 OR4P4Q8NGL7 312 aa3.78□□□□□ -1.8
USP48-202ENST00000374730 OR1P1Q8NH06 330 aa3.78□□□□□ -1.8
USP48-202ENST00000374730 H1FXQ92522 213 aaKnown RBP3.78□□□□□ -1.8
USP48-202ENST00000374730 CCL17Q92583 94 aa3.78□□□□□ -1.8
USP48-202ENST00000374730 SFRP2Q96HF1 295 aa3.78□□□□□ -1.8
USP48-202ENST00000374730 PFDN5Q99471 154 aa3.78□□□□□ -1.8
USP48-202ENST00000374730 DERL1Q9BUN8 251 aa3.78□□□□□ -1.8
USP48-202ENST00000374730 TMEM133Q9H2Q1 129 aa3.78□□□□□ -1.8
USP48-202ENST00000374730 ZNF430Q9H8G1 570 aaPredicted RBP3.78□□□□□ -1.8
USP48-202ENST00000374730 GSN-AS1Q9NRJ2 163 aa3.78□□□□□ -1.8
USP48-202ENST00000374730 DCHS2Q6V1P9 2916 aa3.77□□□□□ -1.81
USP48-202ENST00000374730 A0A1W2PPI3 338 aa3.77□□□□□ -1.81
USP48-202ENST00000374730 TCRBV4S1A1TA0A5B7 111 aa3.77□□□□□ -1.81
USP48-202ENST00000374730 TGFAP01135 160 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms