RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 HIST1H2BLQ99880 126 aa19.63■□□□□ 0.73
CTSA-203ENST00000372459 S4R3C0 116 aa19.63■□□□□ 0.73
CTSA-203ENST00000372459 ABCA1O95477 2261 aa19.62■□□□□ 0.73
CTSA-203ENST00000372459 A0A096LNT2 108 aa19.62■□□□□ 0.73
CTSA-203ENST00000372459 A0A1W2PPQ1 181 aa19.62■□□□□ 0.73
CTSA-203ENST00000372459 C9JCJ5 164 aa19.62■□□□□ 0.73
CTSA-203ENST00000372459 NDUFB8O95169 186 aa19.62■□□□□ 0.73
CTSA-203ENST00000372459 TMEM219Q86XT9 240 aa19.62■□□□□ 0.73
CTSA-203ENST00000372459 PACRGQ96M98 296 aaPredicted RBP19.62■□□□□ 0.73
CTSA-203ENST00000372459 IMMP2LQ96T52 175 aa19.62■□□□□ 0.73
CTSA-203ENST00000372459 BEX4Q9NWD9 120 aaPredicted RBP19.62■□□□□ 0.73
CTSA-203ENST00000372459 MRPL27Q9P0M9 148 aaKnown RBP19.62■□□□□ 0.73
CTSA-203ENST00000372459 KRTAP10-9P60411 292 aa19.61■□□□□ 0.73
CTSA-203ENST00000372459 YPEL3P61236 119 aaPredicted RBP19.61■□□□□ 0.73
CTSA-203ENST00000372459 Q56UQ5 140 aa19.61■□□□□ 0.73
CTSA-203ENST00000372459 ACTL10Q5JWF8 245 aa19.61■□□□□ 0.73
CTSA-203ENST00000372459 PGPEP1LA6NFU8 196 aa19.61■□□□□ 0.73
CTSA-203ENST00000372459 SLC25A39Q9BZJ4 359 aaPredicted RBP19.61■□□□□ 0.73
CTSA-203ENST00000372459 FBXL7Q9UJT9 491 aa19.61■□□□□ 0.73
CTSA-203ENST00000372459 LY96Q9Y6Y9 160 aa19.61■□□□□ 0.73
CTSA-203ENST00000372459 HELTA6NFD8 242 aa19.6■□□□□ 0.73
CTSA-203ENST00000372459 SCGB2A1O75556 95 aa19.6■□□□□ 0.73
CTSA-203ENST00000372459 FAM209BQ5JX69 171 aa19.6■□□□□ 0.73
CTSA-203ENST00000372459 CDPF1Q6NVV7 123 aa19.6■□□□□ 0.73
CTSA-203ENST00000372459 AURKAIP1Q9NWT8 199 aaPredicted RBP19.6■□□□□ 0.73
CTSA-203ENST00000372459 KLK9Q2XQG4 91 aa19.59■□□□□ 0.73
CTSA-203ENST00000372459 LURAP1LQ8IV03 231 aa19.59■□□□□ 0.73
CTSA-203ENST00000372459 OCC1Q8TAD7 63 aa19.59■□□□□ 0.73
CTSA-203ENST00000372459 PRDM13Q9H4Q3 707 aa19.59■□□□□ 0.73
CTSA-203ENST00000372459 KLK9Q9UKQ9 250 aa19.59■□□□□ 0.73
CTSA-203ENST00000372459 SH2D7A6NKC9 451 aaPredicted RBP19.59■□□□□ 0.73
CTSA-203ENST00000372459 F8W735 103 aaPredicted RBP19.59■□□□□ 0.73
CTSA-203ENST00000372459 GP9P14770 177 aa19.59■□□□□ 0.73
CTSA-203ENST00000372459 ZNF491Q8N8L2 437 aa19.59■□□□□ 0.73
CTSA-203ENST00000372459 RNF125Q96EQ8 232 aa19.59■□□□□ 0.73
CTSA-203ENST00000372459 DEFB113Q30KQ7 82 aa19.58■□□□□ 0.73
CTSA-203ENST00000372459 LEMD1Q68G75 181 aa19.58■□□□□ 0.73
CTSA-203ENST00000372459 VN1R17PQ8TDU5 208 aa19.58■□□□□ 0.73
CTSA-203ENST00000372459 TXN2Q99757 166 aa19.58■□□□□ 0.73
CTSA-203ENST00000372459 MDFIC2A0A1B0GVS7 189 aa19.57■□□□□ 0.72
CTSA-203ENST00000372459 AVPP01185 164 aa19.57■□□□□ 0.72
CTSA-203ENST00000372459 IL4P05112 153 aa19.57■□□□□ 0.72
CTSA-203ENST00000372459 NBEAP1P0C6P0 100 aa19.57■□□□□ 0.72
CTSA-203ENST00000372459 ZNF329Q86UD4 541 aa19.57■□□□□ 0.72
CTSA-203ENST00000372459 LRRC75A-AS1Q8N1F1 130 aa19.57■□□□□ 0.72
CTSA-203ENST00000372459 WI2-2373I1.2A0A1W2PRP0 233 aa19.57■□□□□ 0.72
CTSA-203ENST00000372459 FCGR2BP31994 310 aaPredicted RBP19.57■□□□□ 0.72
CTSA-203ENST00000372459 LOXL1Q08397 574 aaPredicted RBP19.57■□□□□ 0.72
CTSA-203ENST00000372459 OR5R1Q8NH85 324 aa19.57■□□□□ 0.72
CTSA-203ENST00000372459 BLNKQ8WV28 456 aa19.57■□□□□ 0.72
CTSA-203ENST00000372459 SFRP2Q96HF1 295 aa19.57■□□□□ 0.72
CTSA-203ENST00000372459 TMEM14CQ9P0S9 112 aa19.57■□□□□ 0.72
CTSA-203ENST00000372459 CSMD1Q96PZ7 3565 aa19.56■□□□□ 0.72
CTSA-203ENST00000372459 XKRY2A2RUG3 117 aa19.56■□□□□ 0.72
CTSA-203ENST00000372459 LINC01548A6NM66 108 aa19.56■□□□□ 0.72
CTSA-203ENST00000372459 GNG4P50150 75 aa19.56■□□□□ 0.72
CTSA-203ENST00000372459 S100A7AQ86SG5 101 aa19.56■□□□□ 0.72
CTSA-203ENST00000372459 SOX21Q9Y651 276 aaPredicted RBP19.56■□□□□ 0.72
CTSA-203ENST00000372459 FBN2P35556 2912 aa19.56■□□□□ 0.72
CTSA-203ENST00000372459 H3BUX3 64 aa19.55■□□□□ 0.72
CTSA-203ENST00000372459 J3QLI3 93 aa19.55■□□□□ 0.72
CTSA-203ENST00000372459 IGHV3-23P01764 117 aa19.55■□□□□ 0.72
CTSA-203ENST00000372459 CENPWQ5EE01 88 aa19.55■□□□□ 0.72
CTSA-203ENST00000372459 SHANK2-AS3Q9BTD1 123 aa19.55■□□□□ 0.72
CTSA-203ENST00000372459 G3V318 75 aa19.55■□□□□ 0.72
CTSA-203ENST00000372459 GATCO43716 136 aaKnown RBP19.55■□□□□ 0.72
CTSA-203ENST00000372459 AMBPP02760 352 aa19.55■□□□□ 0.72
CTSA-203ENST00000372459 AMY1AP04745 511 aa19.55■□□□□ 0.72
CTSA-203ENST00000372459 HNF1AP20823 631 aa19.55■□□□□ 0.72
CTSA-203ENST00000372459 MYCNOSP40205 109 aa19.55■□□□□ 0.72
CTSA-203ENST00000372459 RANP62826 216 aaKnown RBP19.55■□□□□ 0.72
CTSA-203ENST00000372459 FOXL1Q12952 345 aa19.55■□□□□ 0.72
CTSA-203ENST00000372459 ZNF600Q6ZNG1 722 aa19.55■□□□□ 0.72
CTSA-203ENST00000372459 TRBV9A0A0B4J1U6 114 aa19.54■□□□□ 0.72
CTSA-203ENST00000372459 OR2T8A6NH00 312 aa19.54■□□□□ 0.72
CTSA-203ENST00000372459 H3BRN7 92 aa19.54■□□□□ 0.72
CTSA-203ENST00000372459 SNRPCP09234 159 aaKnown RBP19.54■□□□□ 0.72
CTSA-203ENST00000372459 A6NDX4 124 aa19.53■□□□□ 0.72
CTSA-203ENST00000372459 RHOGP84095 191 aa19.53■□□□□ 0.72
CTSA-203ENST00000372459 C15orf32Q32M92 178 aa19.53■□□□□ 0.72
CTSA-203ENST00000372459 ANKRD17O75179 2603 aaKnown RBP19.53■□□□□ 0.72
CTSA-203ENST00000372459 RNF223E7ERA6 249 aa19.53■□□□□ 0.72
CTSA-203ENST00000372459 K7EN84 100 aa19.53■□□□□ 0.72
CTSA-203ENST00000372459 LY6EQ16553 131 aa19.53■□□□□ 0.72
CTSA-203ENST00000372459 TEX38Q6PEX7 206 aa19.53■□□□□ 0.72
CTSA-203ENST00000372459 PEX7O00628 323 aa19.52■□□□□ 0.72
CTSA-203ENST00000372459 TGFAP01135 160 aa19.52■□□□□ 0.72
CTSA-203ENST00000372459 CNN1P51911 297 aaKnown RBP19.52■□□□□ 0.72
CTSA-203ENST00000372459 CRIP2P52943 208 aaPredicted RBP19.52■□□□□ 0.72
CTSA-203ENST00000372459 TAS2R60P59551 318 aa19.52■□□□□ 0.72
CTSA-203ENST00000372459 JOSD1Q15040 202 aaPredicted RBP19.52■□□□□ 0.72
CTSA-203ENST00000372459 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP19.52■□□□□ 0.711e-7■■■□□ 17.5
CTSA-203ENST00000372459 PGPA6NDG6 321 aa19.52■□□□□ 0.71
CTSA-203ENST00000372459 M0QZK8 103 aa19.52■□□□□ 0.71
CTSA-203ENST00000372459 CTSGP08311 255 aa19.52■□□□□ 0.71
CTSA-203ENST00000372459 HIST1H1EP10412 219 aaKnown RBP19.52■□□□□ 0.71
CTSA-203ENST00000372459 RPL15P61313 204 aaKnown RBP19.52■□□□□ 0.71
CTSA-203ENST00000372459 C9orf152Q5JTZ5 239 aa19.52■□□□□ 0.71
CTSA-203ENST00000372459 BPIFA4PQ86YQ2 179 aa19.52■□□□□ 0.71
CTSA-203ENST00000372459 ZNF502Q8TBZ5 544 aa19.52■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms