RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 FAM201AQ5SY85 155 aa9.2□□□□□ -0.94
TSPAN1-201ENST00000372003 PRSS57Q6UWY2 283 aa9.2□□□□□ -0.94
TSPAN1-201ENST00000372003 FAM19A2Q8N3H0 131 aa9.2□□□□□ -0.94
TSPAN1-201ENST00000372003 CT45A3Q8NHU0 189 aa9.2□□□□□ -0.94
TSPAN1-201ENST00000372003 ZNF596Q8TC21 504 aa9.2□□□□□ -0.94
TSPAN1-201ENST00000372003 C10orf105Q8TEF2 133 aa9.2□□□□□ -0.94
TSPAN1-201ENST00000372003 FAM167A-AS1Q96KT0 104 aa9.2□□□□□ -0.94
TSPAN1-201ENST00000372003 TMEM70Q9BUB7 260 aa9.2□□□□□ -0.94
TSPAN1-201ENST00000372003 WNT10AQ9GZT5 417 aa9.2□□□□□ -0.94
TSPAN1-201ENST00000372003 TNFRSF19Q9NS68 423 aa9.2□□□□□ -0.94
TSPAN1-201ENST00000372003 AMMECR1Q9Y4X0 333 aaPredicted RBP9.2□□□□□ -0.94
TSPAN1-201ENST00000372003 ARFGEF3Q5TH69 2177 aa9.2□□□□□ -0.94
TSPAN1-201ENST00000372003 KBTBD11-OT1A0A1B0GTJ5 212 aa9.2□□□□□ -0.94
TSPAN1-201ENST00000372003 A0A1B0GXF2 115 aa9.2□□□□□ -0.94
TSPAN1-201ENST00000372003 OR5AL1P0C617 328 aa9.2□□□□□ -0.94
TSPAN1-201ENST00000372003 SAA2P0DJI9 122 aaPredicted RBP9.2□□□□□ -0.94
TSPAN1-201ENST00000372003 RNASE2P10153 161 aaKnown RBP9.2□□□□□ -0.94
TSPAN1-201ENST00000372003 GPR6P46095 362 aaPredicted RBP9.2□□□□□ -0.94
TSPAN1-201ENST00000372003 MFAP2P55001 183 aa9.2□□□□□ -0.94
TSPAN1-201ENST00000372003 DSCR9P59020 149 aa9.2□□□□□ -0.94
TSPAN1-201ENST00000372003 COTL1Q14019 142 aa9.2□□□□□ -0.94
TSPAN1-201ENST00000372003 C17orf58Q2M2W7 97 aa9.2□□□□□ -0.94
TSPAN1-201ENST00000372003 FBLN7Q53RD9 439 aa9.2□□□□□ -0.94
TSPAN1-201ENST00000372003 EBLN2Q6P2I7 272 aa9.2□□□□□ -0.94
TSPAN1-201ENST00000372003 NHLRC2Q8NBF2 726 aa9.2□□□□□ -0.94
TSPAN1-201ENST00000372003 NUP35Q8NFH5 326 aa9.2□□□□□ -0.94
TSPAN1-201ENST00000372003 STXBP6Q8NFX7 210 aa9.2□□□□□ -0.94
TSPAN1-201ENST00000372003 PIMREGQ9BSJ6 248 aa9.2□□□□□ -0.94
TSPAN1-201ENST00000372003 SLC25A2Q9BXI2 301 aa9.2□□□□□ -0.94
TSPAN1-201ENST00000372003 BPESC1Q9GZL8 116 aa9.2□□□□□ -0.94
TSPAN1-201ENST00000372003 FAM234AQ9H0X4 552 aa9.2□□□□□ -0.94
TSPAN1-201ENST00000372003 RNF7Q9UBF6 113 aa9.2□□□□□ -0.94
TSPAN1-201ENST00000372003 IGKV1OR2-108A0A075B7D4 117 aa9.19□□□□□ -0.94
TSPAN1-201ENST00000372003 TMEM178BH3BS89 294 aa9.19□□□□□ -0.94
TSPAN1-201ENST00000372003 PEX7O00628 323 aa9.19□□□□□ -0.94
TSPAN1-201ENST00000372003 HLA-DRB1P01911 266 aa9.19□□□□□ -0.94
TSPAN1-201ENST00000372003 PPBPP02775 128 aa9.19□□□□□ -0.94
TSPAN1-201ENST00000372003 IGLL1P15814 213 aa9.19□□□□□ -0.94
TSPAN1-201ENST00000372003 HINT1P49773 126 aaPredicted RBP9.19□□□□□ -0.94
TSPAN1-201ENST00000372003 GNG10P50151 68 aa9.19□□□□□ -0.94
TSPAN1-201ENST00000372003 UBE2L3P68036 154 aaKnown RBP9.19□□□□□ -0.94
TSPAN1-201ENST00000372003 PET117Q6UWS5 81 aa9.19□□□□□ -0.94
TSPAN1-201ENST00000372003 MAPK1IP1LQ8NDC0 245 aa9.19□□□□□ -0.94
TSPAN1-201ENST00000372003 DEFB108BQ8NET1 73 aa9.19□□□□□ -0.94
TSPAN1-201ENST00000372003 NUDT10Q8NFP7 164 aa9.19□□□□□ -0.94
TSPAN1-201ENST00000372003 RNASE8Q8TDE3 154 aaKnown RBP9.19□□□□□ -0.94
TSPAN1-201ENST00000372003 NUDT11Q96G61 164 aa9.19□□□□□ -0.94
TSPAN1-201ENST00000372003 TIMD4Q96H15 378 aa9.19□□□□□ -0.94
TSPAN1-201ENST00000372003 C7orf69Q9H7B7 122 aa9.19□□□□□ -0.94
TSPAN1-201ENST00000372003 ANKRD17O75179 2603 aaKnown RBP9.18□□□□□ -0.94
TSPAN1-201ENST00000372003 TEX50A0A1B0GTY4 177 aa9.18□□□□□ -0.94
TSPAN1-201ENST00000372003 FAM231BA6NCW3 169 aa9.18□□□□□ -0.94
TSPAN1-201ENST00000372003 RNF223E7ERA6 249 aa9.18□□□□□ -0.94
TSPAN1-201ENST00000372003 NDUFS8O00217 210 aa9.18□□□□□ -0.94
TSPAN1-201ENST00000372003 LHBP01229 141 aa9.18□□□□□ -0.94
TSPAN1-201ENST00000372003 TFF1P04155 84 aa9.18□□□□□ -0.94
TSPAN1-201ENST00000372003 SLC35B1P78383 322 aa9.18□□□□□ -0.94
TSPAN1-201ENST00000372003 ERHP84090 104 aaKnown RBP9.18□□□□□ -0.94
TSPAN1-201ENST00000372003 ZNF329Q86UD4 541 aa9.18□□□□□ -0.94
TSPAN1-201ENST00000372003 OR4A5Q8NH83 315 aa9.18□□□□□ -0.94
TSPAN1-201ENST00000372003 OSR1Q8TAX0 266 aaPredicted RBP9.18□□□□□ -0.94
TSPAN1-201ENST00000372003 GFRA4Q9GZZ7 299 aa9.18□□□□□ -0.94
TSPAN1-201ENST00000372003 MS4A6AQ9H2W1 248 aa9.18□□□□□ -0.94
TSPAN1-201ENST00000372003 ZNF492Q9P255 531 aa9.18□□□□□ -0.94
TSPAN1-201ENST00000372003 KLF12Q9Y4X4 402 aa9.18□□□□□ -0.94
TSPAN1-201ENST00000372003 PPIAL4EA0A075B759 164 aa9.17□□□□□ -0.94
TSPAN1-201ENST00000372003 LOC105371242A0A075B767 164 aa9.17□□□□□ -0.94
TSPAN1-201ENST00000372003 IGHV3OR15-7A0A075B7D8 119 aa9.17□□□□□ -0.94
TSPAN1-201ENST00000372003 PPIAL4DF5H284 164 aa9.17□□□□□ -0.94
TSPAN1-201ENST00000372003 SMAD7O15105 426 aaKnown RBP9.17□□□□□ -0.94
TSPAN1-201ENST00000372003 PPIAL4FP0DN26 164 aa9.17□□□□□ -0.94
TSPAN1-201ENST00000372003 MYCNOSP40205 109 aa9.17□□□□□ -0.94
TSPAN1-201ENST00000372003 UNQ5815/PRO19632Q6UWF5 114 aa9.17□□□□□ -0.94
TSPAN1-201ENST00000372003 C12orf54Q6X4T0 127 aa9.17□□□□□ -0.94
TSPAN1-201ENST00000372003 C1orf229Q6ZS94 237 aaPredicted RBP9.17□□□□□ -0.94
TSPAN1-201ENST00000372003 OR4C5Q8NGB2 326 aa9.17□□□□□ -0.94
TSPAN1-201ENST00000372003 PAXXQ9BUH6 204 aa9.17□□□□□ -0.94
TSPAN1-201ENST00000372003 TMEM191AQ9H0A3 160 aa9.17□□□□□ -0.94
TSPAN1-201ENST00000372003 PPIAL4AQ9Y536 164 aa9.17□□□□□ -0.94
TSPAN1-201ENST00000372003 PRRC2AP48634 2157 aaKnown RBP9.17□□□□□ -0.94
TSPAN1-201ENST00000372003 TRAV34A0A0B4J273 112 aa9.16□□□□□ -0.94
TSPAN1-201ENST00000372003 A8MWL6 223 aa9.16□□□□□ -0.94
TSPAN1-201ENST00000372003 VWC2LB2RUY7 222 aa9.16□□□□□ -0.94
TSPAN1-201ENST00000372003 SLC25A16P16260 332 aa9.16□□□□□ -0.94
TSPAN1-201ENST00000372003 HBBP68871 147 aa9.16□□□□□ -0.94
TSPAN1-201ENST00000372003 Q56UQ5 140 aa9.16□□□□□ -0.94
TSPAN1-201ENST00000372003 GDF5OSQ5U4N7 250 aa9.16□□□□□ -0.94
TSPAN1-201ENST00000372003 LCN12Q6JVE5 192 aa9.16□□□□□ -0.94
TSPAN1-201ENST00000372003 LYG1Q8N1E2 194 aa9.16□□□□□ -0.94
TSPAN1-201ENST00000372003 CIARTQ8N365 385 aaPredicted RBP9.16□□□□□ -0.94
TSPAN1-201ENST00000372003 THAP8Q8NA92 274 aa9.16□□□□□ -0.94
TSPAN1-201ENST00000372003 PMCHL2Q9BQD1 86 aa9.16□□□□□ -0.94
TSPAN1-201ENST00000372003 ZNF430Q9H8G1 570 aaPredicted RBP9.16□□□□□ -0.94
TSPAN1-201ENST00000372003 ZNF355PQ9NSJ1 428 aa9.16□□□□□ -0.94
TSPAN1-201ENST00000372003 IGHV4-61A0A0C4DH41 118 aa9.16□□□□□ -0.94
TSPAN1-201ENST00000372003 COX7A2P2O60397 106 aa9.16□□□□□ -0.94
TSPAN1-201ENST00000372003 TOX4O94842 621 aa9.16□□□□□ -0.94
TSPAN1-201ENST00000372003 SUB1P53999 127 aaKnown RBP eCLIP9.16□□□□□ -0.94
TSPAN1-201ENST00000372003 C21orf62-AS1Q17RA5 79 aa9.16□□□□□ -0.94
TSPAN1-201ENST00000372003 C10orf113Q5VZT2 155 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms