RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 NLRC5Q86WI3 1866 aa11.99□□□□□ -0.49
NDC1-201ENST00000371429 LOC107984156A0A0G2JMH3 177 aa11.99□□□□□ -0.49
NDC1-201ENST00000371429 ATP5LO75964 103 aa11.99□□□□□ -0.49
NDC1-201ENST00000371429 IGLV1-44P01699 117 aa11.99□□□□□ -0.49
NDC1-201ENST00000371429 PRB4P10163 310 aaPredicted RBP11.99□□□□□ -0.49
NDC1-201ENST00000371429 SPATA45Q537H7 98 aa11.99□□□□□ -0.49
NDC1-201ENST00000371429 ARL17AQ8IVW1 177 aa11.99□□□□□ -0.49
NDC1-201ENST00000371429 MRAP2Q96G30 205 aa11.99□□□□□ -0.49
NDC1-201ENST00000371429 PTPRDP23468 1912 aa11.99□□□□□ -0.49
NDC1-201ENST00000371429 ZNF98A6NK75 572 aa11.99□□□□□ -0.49
NDC1-201ENST00000371429 PRB1P04280 392 aa11.99□□□□□ -0.49
NDC1-201ENST00000371429 TDGF1P13385 188 aa11.99□□□□□ -0.49
NDC1-201ENST00000371429 RPL35AP18077 110 aaKnown RBP11.99□□□□□ -0.49
NDC1-201ENST00000371429 GPR61Q9BZJ8 451 aa11.99□□□□□ -0.49
NDC1-201ENST00000371429 PTPN13Q12923 2485 aa11.99□□□□□ -0.49
NDC1-201ENST00000371429 STAG3L2P0CL84 134 aa11.99□□□□□ -0.49
NDC1-201ENST00000371429 C9orf139Q6ZV77 190 aa11.99□□□□□ -0.49
NDC1-201ENST00000371429 ANAPC1Q9H1A4 1944 aa11.98□□□□□ -0.49
NDC1-201ENST00000371429 NPIPB5A8MRT5 1133 aa11.98□□□□□ -0.49
NDC1-201ENST00000371429 PKIAP61925 76 aa11.98□□□□□ -0.49
NDC1-201ENST00000371429 ZNF562Q6V9R5 426 aa11.98□□□□□ -0.49
NDC1-201ENST00000371429 ARL6IP6Q8N6S5 226 aa11.98□□□□□ -0.49
NDC1-201ENST00000371429 IZUMO1RA6ND01 250 aa11.98□□□□□ -0.49
NDC1-201ENST00000371429 OVOL3O00110 214 aa11.98□□□□□ -0.49
NDC1-201ENST00000371429 IMMP2LQ96T52 175 aa11.98□□□□□ -0.49
NDC1-201ENST00000371429 RHPN1-AS1Q9BWJ2 59 aa11.98□□□□□ -0.49
NDC1-201ENST00000371429 ZNRD1Q9P1U0 126 aa11.98□□□□□ -0.49
NDC1-201ENST00000371429 SYNJ2BPP57105 145 aa11.98□□□□□ -0.49
NDC1-201ENST00000371429 ACTL10Q5JWF8 245 aa11.98□□□□□ -0.49
NDC1-201ENST00000371429 ST20Q9HBF5 79 aa11.98□□□□□ -0.49
NDC1-201ENST00000371429 ZNF503-AS2A6NEH8 195 aa11.98□□□□□ -0.49
NDC1-201ENST00000371429 RNASE1P07998 156 aaKnown RBP11.98□□□□□ -0.49
NDC1-201ENST00000371429 CFHR2P36980 270 aa11.98□□□□□ -0.49
NDC1-201ENST00000371429 RPL23P62829 140 aaKnown RBP11.98□□□□□ -0.49
NDC1-201ENST00000371429 PET117Q6UWS5 81 aa11.98□□□□□ -0.49
NDC1-201ENST00000371429 WFDC1Q9HC57 220 aa11.98□□□□□ -0.49
NDC1-201ENST00000371429 H3BRM9 83 aa11.97□□□□□ -0.49
NDC1-201ENST00000371429 DNLZQ5SXM8 178 aa11.97□□□□□ -0.49
NDC1-201ENST00000371429 SLC25A34Q6PIV7 304 aa11.97□□□□□ -0.49
NDC1-201ENST00000371429 ZNF524Q96C55 264 aa11.97□□□□□ -0.49
NDC1-201ENST00000371429 REG4Q9BYZ8 158 aa11.97□□□□□ -0.49
NDC1-201ENST00000371429 ITGB1BP1O14713 200 aa11.97□□□□□ -0.49
NDC1-201ENST00000371429 LMO1P25800 156 aa11.97□□□□□ -0.49
NDC1-201ENST00000371429 ERASQ7Z444 233 aa11.97□□□□□ -0.49
NDC1-201ENST00000371429 IGKV2-40A0A087WW87 121 aaPredicted RBP11.97□□□□□ -0.49
NDC1-201ENST00000371429 IGKV2D-40P01614 121 aaPredicted RBP11.97□□□□□ -0.49
NDC1-201ENST00000371429 IGLV3-9A0A075B6K5 115 aa11.97□□□□□ -0.49
NDC1-201ENST00000371429 J3QLI3 93 aa11.97□□□□□ -0.49
NDC1-201ENST00000371429 FCN3O75636 299 aa11.97□□□□□ -0.49
NDC1-201ENST00000371429 NTF4P34130 210 aa11.97□□□□□ -0.49
NDC1-201ENST00000371429 DTX2Q86UW9 622 aa11.97□□□□□ -0.49
NDC1-201ENST00000371429 EXOC3-AS1Q8N2X6 119 aa11.97□□□□□ -0.49
NDC1-201ENST00000371429 VSIRQ9H7M9 311 aa11.97□□□□□ -0.49
NDC1-201ENST00000371429 LOXP28300 417 aaPredicted RBP11.96□□□□□ -0.49
NDC1-201ENST00000371429 TMEM14EPQ6UXP3 125 aa11.96□□□□□ -0.49
NDC1-201ENST00000371429 TRAV8-6A0A0B4J262 113 aa11.96□□□□□ -0.49
NDC1-201ENST00000371429 CFAP161Q6P656 301 aa11.96□□□□□ -0.49
NDC1-201ENST00000371429 DAZ1Q9NQZ3 744 aaKnown RBP11.96□□□□□ -0.49
NDC1-201ENST00000371429 MRPS16Q9Y3D3 137 aaKnown RBP11.96□□□□□ -0.49
NDC1-201ENST00000371429 YLPM1P49750 1951 aaKnown RBP11.96□□□□□ -0.49
NDC1-201ENST00000371429 HEATR5AQ86XA9 2040 aa11.96□□□□□ -0.49
NDC1-201ENST00000371429 SRRM4A7MD48 611 aaKnown RBP11.96□□□□□ -0.5
NDC1-201ENST00000371429 STAG3L3P0CL85 134 aa11.96□□□□□ -0.5
NDC1-201ENST00000371429 GRNP28799 593 aaKnown RBP11.96□□□□□ -0.5
NDC1-201ENST00000371429 C1QTNF4Q9BXJ3 329 aa11.96□□□□□ -0.5
NDC1-201ENST00000371429 SONP18583 2426 aaKnown RBP11.95□□□□□ -0.5
NDC1-201ENST00000371429 CACNG7P62955 275 aa11.95□□□□□ -0.5
NDC1-201ENST00000371429 IGFL2Q6UWQ7 119 aa11.95□□□□□ -0.5
NDC1-201ENST00000371429 ATOH7Q8N100 152 aa11.95□□□□□ -0.5
NDC1-201ENST00000371429 ATP6V0E1O15342 81 aa11.95□□□□□ -0.5
NDC1-201ENST00000371429 ZNF415Q09FC8 603 aa11.95□□□□□ -0.5
NDC1-201ENST00000371429 JOSD1Q15040 202 aaPredicted RBP11.95□□□□□ -0.5
NDC1-201ENST00000371429 UBE2DNLQ8IWF7 75 aa11.95□□□□□ -0.5
NDC1-201ENST00000371429 SMIM12Q96EX1 92 aa11.95□□□□□ -0.5
NDC1-201ENST00000371429 CHCHD5Q9BSY4 110 aa11.95□□□□□ -0.5
NDC1-201ENST00000371429 OSTCQ9NRP0 149 aa11.95□□□□□ -0.5
NDC1-201ENST00000371429 TRAV9-1A0A075B6T8 112 aa11.95□□□□□ -0.5
NDC1-201ENST00000371429 LBHQ53QV2 105 aaPredicted RBP11.95□□□□□ -0.5
NDC1-201ENST00000371429 SPATA31B1PQ5VZV4 182 aa11.95□□□□□ -0.5
NDC1-201ENST00000371429 VOPP1Q96AW1 172 aa11.95□□□□□ -0.5
NDC1-201ENST00000371429 SRSF8Q9BRL6 282 aaKnown RBP11.95□□□□□ -0.5
NDC1-201ENST00000371429 CARHSP1Q9Y2V2 147 aaKnown RBP11.95□□□□□ -0.5
NDC1-201ENST00000371429 FRMPD3Q5JV73 1810 aa11.95□□□□□ -0.5
NDC1-201ENST00000371429 CSPG4Q6UVK1 2322 aa11.95□□□□□ -0.5
NDC1-201ENST00000371429 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.95□□□□□ -0.5
NDC1-201ENST00000371429 MBD3L1Q8WWY6 194 aa11.95□□□□□ -0.5
NDC1-201ENST00000371429 MGST2Q99735 147 aa11.95□□□□□ -0.5
NDC1-201ENST00000371429 FOXC2Q99958 501 aa11.95□□□□□ -0.5
NDC1-201ENST00000371429 CRPP02741 224 aa11.94□□□□□ -0.5
NDC1-201ENST00000371429 SOD3P08294 240 aa11.94□□□□□ -0.5
NDC1-201ENST00000371429 MALP21145 153 aa11.94□□□□□ -0.5
NDC1-201ENST00000371429 SEPSECSQ9HD40 501 aaKnown RBP11.94□□□□□ -0.5
NDC1-201ENST00000371429 PGPEP1LA6NFU8 196 aa11.94□□□□□ -0.5
NDC1-201ENST00000371429 IFI27P40305 119 aaPredicted RBP11.94□□□□□ -0.5
NDC1-201ENST00000371429 HINT1P49773 126 aaPredicted RBP11.94□□□□□ -0.5
NDC1-201ENST00000371429 DUX4L9Q6RFH8 374 aaPredicted RBP11.94□□□□□ -0.5
NDC1-201ENST00000371429 OCC1Q8TAD7 63 aa11.94□□□□□ -0.5
NDC1-201ENST00000371429 RCHY1Q96PM5 261 aa11.94□□□□□ -0.5
NDC1-201ENST00000371429 RNASE2P10153 161 aaKnown RBP11.94□□□□□ -0.5
NDC1-201ENST00000371429 VCX2Q9H322 139 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms