RNA–Protein interactions for RNA: ENST00000370828.3

GPC4-201, Transcript of glypican 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC4, Length 4,960 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4-201ENST00000370828 MORN2Q502X0 79 aa10.48□□□□□ -0.73
GPC4-201ENST00000370828 PATE3B3GLJ2 98 aa10.48□□□□□ -0.73
GPC4-201ENST00000370828 IGHV3-23P01764 117 aa10.48□□□□□ -0.73
GPC4-201ENST00000370828 CD24P25063 80 aa10.48□□□□□ -0.73
GPC4-201ENST00000370828 SMAD7O15105 426 aaKnown RBP10.48□□□□□ -0.73
GPC4-201ENST00000370828 CIRBPQ14011 172 aaKnown RBP10.48□□□□□ -0.73
GPC4-201ENST00000370828 ANKRD29Q8N6D5 301 aa10.48□□□□□ -0.73
GPC4-201ENST00000370828 FAM216BQ8N7L0 139 aa10.48□□□□□ -0.73
GPC4-201ENST00000370828 RNF125Q96EQ8 232 aa10.48□□□□□ -0.73
GPC4-201ENST00000370828 RCHY1Q96PM5 261 aa10.48□□□□□ -0.73
GPC4-201ENST00000370828 ANAPC10Q9UM13 185 aa10.48□□□□□ -0.73
GPC4-201ENST00000370828 NRXN2Q9P2S2 1712 aa10.48□□□□□ -0.73
GPC4-201ENST00000370828 MYLKQ15746 1914 aa10.48□□□□□ -0.73
GPC4-201ENST00000370828 HEATR5AQ86XA9 2040 aa10.48□□□□□ -0.73
GPC4-201ENST00000370828 TEX48A0A1B0GUV7 120 aa10.48□□□□□ -0.73
GPC4-201ENST00000370828 NPIPB5A8MRT5 1133 aa10.48□□□□□ -0.73
GPC4-201ENST00000370828 PMS2CLQ68D20 193 aa10.48□□□□□ -0.73
GPC4-201ENST00000370828 C8orf86Q6ZUL3 223 aa10.48□□□□□ -0.73
GPC4-201ENST00000370828 HAPLN4Q86UW8 402 aa10.48□□□□□ -0.73
GPC4-201ENST00000370828 SPANXB1Q9NS25 103 aaPredicted RBP10.48□□□□□ -0.73
GPC4-201ENST00000370828 IGHV3-66A0A0C4DH42 116 aa10.47□□□□□ -0.73
GPC4-201ENST00000370828 TCRBV4S1A1TA0A5B7 111 aa10.47□□□□□ -0.73
GPC4-201ENST00000370828 C5orf67F2Z3F1 127 aa10.47□□□□□ -0.73
GPC4-201ENST00000370828 SRSF7Q16629 238 aaKnown RBP eCLIP10.47□□□□□ -0.73
GPC4-201ENST00000370828 RNF115Q9Y4L5 304 aa10.47□□□□□ -0.73
GPC4-201ENST00000370828 F2RL2O00254 374 aa10.47□□□□□ -0.73
GPC4-201ENST00000370828 COA6Q5JTJ3 125 aaKnown RBP10.47□□□□□ -0.73
GPC4-201ENST00000370828 METTL26Q96S19 204 aa10.47□□□□□ -0.73
GPC4-201ENST00000370828 FBXL15Q9H469 300 aa10.47□□□□□ -0.73
GPC4-201ENST00000370828 POLEQ07864 2286 aa10.47□□□□□ -0.73
GPC4-201ENST00000370828 NPIPB11E5RHQ5 1161 aa10.47□□□□□ -0.73
GPC4-201ENST00000370828 C20orf204Q6ZNR8 217 aa10.47□□□□□ -0.73
GPC4-201ENST00000370828 INTS1Q8N201 2190 aaKnown RBP10.47□□□□□ -0.73
GPC4-201ENST00000370828 IGLC7A0M8Q6 106 aa10.47□□□□□ -0.73
GPC4-201ENST00000370828 SLC25A48Q6ZT89 311 aaKnown RBP10.47□□□□□ -0.73
GPC4-201ENST00000370828 RPRMLQ8N4K4 120 aa10.47□□□□□ -0.73
GPC4-201ENST00000370828 MYOD1P15172 320 aa10.46□□□□□ -0.73
GPC4-201ENST00000370828 S100A7L2Q5SY68 101 aa10.46□□□□□ -0.73
GPC4-201ENST00000370828 BVES-AS1Q5T3Y7 98 aa10.46□□□□□ -0.73
GPC4-201ENST00000370828 ZC2HC1BQ5TFG8 222 aa10.46□□□□□ -0.73
GPC4-201ENST00000370828 ZIC4Q8N9L1 334 aa10.46□□□□□ -0.73
GPC4-201ENST00000370828 MOB4Q9Y3A3 225 aa10.46□□□□□ -0.73
GPC4-201ENST00000370828 TRAV12-3A0A0B4J271 114 aa10.46□□□□□ -0.73
GPC4-201ENST00000370828 PRCDQ00LT1 54 aa10.46□□□□□ -0.73
GPC4-201ENST00000370828 SCN10AQ9Y5Y9 1956 aa10.46□□□□□ -0.74
GPC4-201ENST00000370828 MRPL23Q16540 153 aaKnown RBP10.46□□□□□ -0.74
GPC4-201ENST00000370828 PRSS57Q6UWY2 283 aa10.46□□□□□ -0.74
GPC4-201ENST00000370828 DEFB125Q8N687 156 aa10.46□□□□□ -0.74
GPC4-201ENST00000370828 CHAC1Q9BUX1 264 aa10.46□□□□□ -0.74
GPC4-201ENST00000370828 PSPNO60542 156 aa10.46□□□□□ -0.74
GPC4-201ENST00000370828 YPEL1O60688 119 aa10.46□□□□□ -0.74
GPC4-201ENST00000370828 C2orf82Q6UX34 121 aa10.46□□□□□ -0.74
GPC4-201ENST00000370828 DOCK10Q96BY6 2186 aa10.46□□□□□ -0.74
GPC4-201ENST00000370828 YPEL2Q96QA6 119 aa10.46□□□□□ -0.74
GPC4-201ENST00000370828 IGKV1-6A0A0C4DH72 117 aa10.45□□□□□ -0.74
GPC4-201ENST00000370828 FAM90A27PA6NNH2 459 aa10.45□□□□□ -0.74
GPC4-201ENST00000370828 C1orf53Q5VUE5 145 aa10.45□□□□□ -0.74
GPC4-201ENST00000370828 EXOC3-AS1Q8N2X6 119 aa10.45□□□□□ -0.74
GPC4-201ENST00000370828 HS3ST6Q96QI5 342 aa10.45□□□□□ -0.74
GPC4-201ENST00000370828 SCRT1Q9BWW7 348 aa10.45□□□□□ -0.74
GPC4-201ENST00000370828 LINC00473A8K010 186 aa10.45□□□□□ -0.74
GPC4-201ENST00000370828 TOMM40O96008 361 aa10.45□□□□□ -0.74
GPC4-201ENST00000370828 ASIPP42127 132 aa10.45□□□□□ -0.74
GPC4-201ENST00000370828 FOXG1P55316 489 aaPredicted RBP10.45□□□□□ -0.74
GPC4-201ENST00000370828 IL18BPO95998 194 aa10.45□□□□□ -0.74
GPC4-201ENST00000370828 VGLL1Q99990 258 aa10.45□□□□□ -0.74
GPC4-201ENST00000370828 CD3EP07766 207 aa10.45□□□□□ -0.74
GPC4-201ENST00000370828 IFI27P40305 119 aaPredicted RBP10.45□□□□□ -0.74
GPC4-201ENST00000370828 KLF17Q5JT82 389 aaPredicted RBP10.45□□□□□ -0.74
GPC4-201ENST00000370828 C10orf55Q5SWW7 151 aa10.45□□□□□ -0.74
GPC4-201ENST00000370828 SHANK1Q9Y566 2161 aa10.44□□□□□ -0.74
GPC4-201ENST00000370828 CT83Q5H943 113 aa10.44□□□□□ -0.74
GPC4-201ENST00000370828 RNF183Q96D59 192 aa10.44□□□□□ -0.74
GPC4-201ENST00000370828 ERG28Q9UKR5 140 aa10.44□□□□□ -0.74
GPC4-201ENST00000370828 NPIPB6E9PJ23 425 aa10.44□□□□□ -0.74
GPC4-201ENST00000370828 F5H768 121 aa10.44□□□□□ -0.74
GPC4-201ENST00000370828 GFRA3O60609 400 aa10.44□□□□□ -0.74
GPC4-201ENST00000370828 ASPHD1Q5U4P2 390 aa10.44□□□□□ -0.74
GPC4-201ENST00000370828 BRCA1P38398 1863 aaKnown RBP10.44□□□□□ -0.74
GPC4-201ENST00000370828 CLPSP04118 112 aa10.44□□□□□ -0.74
GPC4-201ENST00000370828 RPL15P61313 204 aaKnown RBP10.44□□□□□ -0.74
GPC4-201ENST00000370828 C5orf64Q2M2E5 130 aa10.44□□□□□ -0.74
GPC4-201ENST00000370828 NRN1LQ496H8 165 aa10.44□□□□□ -0.74
GPC4-201ENST00000370828 PKIGQ9Y2B9 76 aa10.44□□□□□ -0.74
GPC4-201ENST00000370828 VWC2Q2TAL6 325 aa10.44□□□□□ -0.74
GPC4-201ENST00000370828 V9GYV3 84 aa10.44□□□□□ -0.74
GPC4-201ENST00000370828 FABP5P3A8MUU1 101 aa10.43□□□□□ -0.74
GPC4-201ENST00000370828 C21orf140B9A014 251 aa10.43□□□□□ -0.74
GPC4-201ENST00000370828 SMKR1H3BMG3 65 aa10.43□□□□□ -0.74
GPC4-201ENST00000370828 CECR9P0C854 216 aa10.43□□□□□ -0.74
GPC4-201ENST00000370828 HIST1H4AP62805 103 aaKnown RBP10.43□□□□□ -0.74
GPC4-201ENST00000370828 MLANAQ16655 118 aa10.43□□□□□ -0.74
GPC4-201ENST00000370828 LINC01559Q495D7 138 aa10.43□□□□□ -0.74
GPC4-201ENST00000370828 LYZL1Q6UWQ5 148 aa10.43□□□□□ -0.74
GPC4-201ENST00000370828 WISP1O95388 367 aa10.43□□□□□ -0.74
GPC4-201ENST00000370828 SRSF1Q07955 248 aaKnown RBP eCLIP10.43□□□□□ -0.74
GPC4-201ENST00000370828 SMPXQ9UHP9 88 aa10.43□□□□□ -0.74
GPC4-201ENST00000370828 DOPEY2Q9Y3R5 2298 aa10.43□□□□□ -0.74
GPC4-201ENST00000370828 TCRAP04437 139 aa10.43□□□□□ -0.74
GPC4-201ENST00000370828 TMEM42Q69YG0 159 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms