RNA–Protein interactions for RNA: ENST00000369747.7

UBE3D-203, Transcript of ubiquitin protein ligase E3D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3D, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-203ENST00000369747 DUX5Q96PT3 197 aa13.59□□□□□ -0.23
UBE3D-203ENST00000369747 PYGO2Q9BRQ0 406 aa13.59□□□□□ -0.23
UBE3D-203ENST00000369747 SRD5A1P18405 259 aa13.58□□□□□ -0.23
UBE3D-203ENST00000369747 FAM103A1Q9BTL3 118 aaKnown RBP13.58□□□□□ -0.23
UBE3D-203ENST00000369747 ELOA3CA0A087WX78 387 aaPredicted RBP13.58□□□□□ -0.24
UBE3D-203ENST00000369747 A0A1W2PRE2 83 aa13.58□□□□□ -0.24
UBE3D-203ENST00000369747 SH2D7A6NKC9 451 aaPredicted RBP13.58□□□□□ -0.24
UBE3D-203ENST00000369747 UBE2CO00762 179 aa13.58□□□□□ -0.24
UBE3D-203ENST00000369747 TRGC2P03986 189 aa13.58□□□□□ -0.24
UBE3D-203ENST00000369747 RPL35P42766 123 aaKnown RBP13.58□□□□□ -0.24
UBE3D-203ENST00000369747 UBE2L3P68036 154 aaKnown RBP13.58□□□□□ -0.24
UBE3D-203ENST00000369747 LINC00305Q7Z4B0 112 aa13.58□□□□□ -0.24
UBE3D-203ENST00000369747 OCC1Q8TAD7 63 aa13.58□□□□□ -0.24
UBE3D-203ENST00000369747 OR5B12Q96R08 314 aa13.58□□□□□ -0.24
UBE3D-203ENST00000369747 C9JCJ5 164 aa13.57□□□□□ -0.24
UBE3D-203ENST00000369747 AMY1AP04745 511 aa13.57□□□□□ -0.24
UBE3D-203ENST00000369747 PYYP10082 97 aa13.57□□□□□ -0.24
UBE3D-203ENST00000369747 CRYBB3P26998 211 aa13.57□□□□□ -0.24
UBE3D-203ENST00000369747 AKR1D1P51857 326 aa13.57□□□□□ -0.24
UBE3D-203ENST00000369747 PAXXQ9BUH6 204 aa13.57□□□□□ -0.24
UBE3D-203ENST00000369747 C1RLQ9NZP8 487 aa13.57□□□□□ -0.24
UBE3D-203ENST00000369747 ORM2P19652 201 aa13.56□□□□□ -0.24
UBE3D-203ENST00000369747 S100PP25815 95 aa13.56□□□□□ -0.24
UBE3D-203ENST00000369747 OR1B1Q8NGR6 318 aa13.56□□□□□ -0.24
UBE3D-203ENST00000369747 PITPNC1Q9UKF7 332 aa13.56□□□□□ -0.24
UBE3D-203ENST00000369747 K7EIM0 57 aa13.56□□□□□ -0.24
UBE3D-203ENST00000369747 AP4M1O00189 453 aa13.56□□□□□ -0.24
UBE3D-203ENST00000369747 IGLC1P0CG04 106 aa13.56□□□□□ -0.24
UBE3D-203ENST00000369747 PLP1P60201 277 aa13.56□□□□□ -0.24
UBE3D-203ENST00000369747 SUMO1P63165 101 aaKnown RBP13.56□□□□□ -0.24
UBE3D-203ENST00000369747 NDPQ00604 133 aa13.56□□□□□ -0.24
UBE3D-203ENST00000369747 C5orf56Q8N8D9 126 aa13.56□□□□□ -0.24
UBE3D-203ENST00000369747 OR5R1Q8NH85 324 aa13.56□□□□□ -0.24
UBE3D-203ENST00000369747 FXYD5Q96DB9 178 aa13.56□□□□□ -0.24
UBE3D-203ENST00000369747 SFRP2Q96HF1 295 aa13.56□□□□□ -0.24
UBE3D-203ENST00000369747 OR51M1Q9H341 326 aa13.56□□□□□ -0.24
UBE3D-203ENST00000369747 VPREB3Q9UKI3 123 aa13.56□□□□□ -0.24
UBE3D-203ENST00000369747 MOB4Q9Y3A3 225 aa13.56□□□□□ -0.24
UBE3D-203ENST00000369747 K7EN84 100 aa13.55□□□□□ -0.24
UBE3D-203ENST00000369747 PHOX2AO14813 284 aa13.55□□□□□ -0.24
UBE3D-203ENST00000369747 TGOLN2O43493 480 aa13.55□□□□□ -0.24
UBE3D-203ENST00000369747 CX3CL1P78423 397 aa13.55□□□□□ -0.24
UBE3D-203ENST00000369747 FABP9Q0Z7S8 132 aa13.55□□□□□ -0.24
UBE3D-203ENST00000369747 ASPHD1Q5U4P2 390 aa13.55□□□□□ -0.24
UBE3D-203ENST00000369747 ZNF562Q6V9R5 426 aa13.55□□□□□ -0.24
UBE3D-203ENST00000369747 LINC00518Q8N0U6 118 aa13.55□□□□□ -0.24
UBE3D-203ENST00000369747 LY96Q9Y6Y9 160 aa13.55□□□□□ -0.24
UBE3D-203ENST00000369747 PPP1R2P9O14990 202 aa13.54□□□□□ -0.24
UBE3D-203ENST00000369747 GGCTO75223 188 aaKnown RBP13.54□□□□□ -0.24
UBE3D-203ENST00000369747 RASL11BQ9BPW5 248 aa13.54□□□□□ -0.24
UBE3D-203ENST00000369747 ESM1Q9NQ30 184 aa13.54□□□□□ -0.24
UBE3D-203ENST00000369747 HELTA6NFD8 242 aa13.54□□□□□ -0.24
UBE3D-203ENST00000369747 HIST1H2BKO60814 126 aa13.54□□□□□ -0.24
UBE3D-203ENST00000369747 HYPMO75409 117 aa13.54□□□□□ -0.24
UBE3D-203ENST00000369747 HIST1H2BJP06899 126 aa13.54□□□□□ -0.24
UBE3D-203ENST00000369747 HIST1H2BOP23527 126 aa13.54□□□□□ -0.24
UBE3D-203ENST00000369747 HIST1H2BBP33778 126 aa13.54□□□□□ -0.24
UBE3D-203ENST00000369747 HIST1H2BDP58876 126 aa13.54□□□□□ -0.24
UBE3D-203ENST00000369747 HIST1H2BCP62807 126 aa13.54□□□□□ -0.24
UBE3D-203ENST00000369747 BLCAPP62952 87 aa13.54□□□□□ -0.24
UBE3D-203ENST00000369747 HIST2H2BEQ16778 126 aa13.54□□□□□ -0.24
UBE3D-203ENST00000369747 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.54□□□□□ -0.24
UBE3D-203ENST00000369747 TEX38Q6PEX7 206 aa13.54□□□□□ -0.24
UBE3D-203ENST00000369747 OR1L6Q8NGR2 347 aa13.54□□□□□ -0.24
UBE3D-203ENST00000369747 ARPC1AQ92747 370 aa13.54□□□□□ -0.24
UBE3D-203ENST00000369747 HIST1H2BHQ93079 126 aa13.54□□□□□ -0.24
UBE3D-203ENST00000369747 HIST1H2BNQ99877 126 aa13.54□□□□□ -0.24
UBE3D-203ENST00000369747 HIST1H2BMQ99879 126 aa13.54□□□□□ -0.24
UBE3D-203ENST00000369747 HSPB9Q9BQS6 159 aa13.54□□□□□ -0.24
UBE3D-203ENST00000369747 SRD5A3Q9H8P0 318 aa13.54□□□□□ -0.24
UBE3D-203ENST00000369747 A0A1W2PPQ1 181 aa13.53□□□□□ -0.24
UBE3D-203ENST00000369747 NPIPB5A8MRT5 1133 aa13.53□□□□□ -0.24
UBE3D-203ENST00000369747 PSG1P11464 419 aa13.53□□□□□ -0.24
UBE3D-203ENST00000369747 TIGITQ495A1 244 aa13.53□□□□□ -0.24
UBE3D-203ENST00000369747 FRZBQ92765 325 aa13.53□□□□□ -0.24
UBE3D-203ENST00000369747 DNAJC9-AS1A6NH13 148 aa13.52□□□□□ -0.24
UBE3D-203ENST00000369747 IGKV1-17P01599 117 aa13.52□□□□□ -0.24
UBE3D-203ENST00000369747 HLA-DRB1P01911 266 aa13.52□□□□□ -0.24
UBE3D-203ENST00000369747 SCGB2A2Q13296 93 aa13.52□□□□□ -0.24
UBE3D-203ENST00000369747 CENPWQ5EE01 88 aa13.52□□□□□ -0.24
UBE3D-203ENST00000369747 Q6ZS46 218 aa13.52□□□□□ -0.24
UBE3D-203ENST00000369747 IGHV7-81A0A0B4J1V7 117 aa13.52□□□□□ -0.25
UBE3D-203ENST00000369747 LINC01548A6NM66 108 aa13.52□□□□□ -0.25
UBE3D-203ENST00000369747 STXBP6Q8NFX7 210 aa13.52□□□□□ -0.25
UBE3D-203ENST00000369747 FANCD2OSQ96PS1 177 aa13.52□□□□□ -0.25
UBE3D-203ENST00000369747 IMMP2LQ96T52 175 aa13.52□□□□□ -0.25
UBE3D-203ENST00000369747 IGLV11-55A0A075B6I3 123 aa13.51□□□□□ -0.25
UBE3D-203ENST00000369747 TRGC1P0CF51 173 aa13.51□□□□□ -0.25
UBE3D-203ENST00000369747 GNG4P50150 75 aa13.51□□□□□ -0.25
UBE3D-203ENST00000369747 FAM3BP58499 235 aaPredicted RBP13.51□□□□□ -0.25
UBE3D-203ENST00000369747 KCNIP4Q6PIL6 250 aa13.51□□□□□ -0.25
UBE3D-203ENST00000369747 ZNF329Q86UD4 541 aa13.51□□□□□ -0.25
UBE3D-203ENST00000369747 TTC9CQ8N5M4 171 aa13.51□□□□□ -0.25
UBE3D-203ENST00000369747 OR10G8Q8NGN5 311 aa13.51□□□□□ -0.25
UBE3D-203ENST00000369747 CRLF1O75462 422 aa13.51□□□□□ -0.25
UBE3D-203ENST00000369747 SNRPCP09234 159 aaKnown RBP13.51□□□□□ -0.25
UBE3D-203ENST00000369747 EGR2P11161 476 aaPredicted RBP13.51□□□□□ -0.25
UBE3D-203ENST00000369747 MYCNOSP40205 109 aa13.51□□□□□ -0.25
UBE3D-203ENST00000369747 LYZP61626 148 aa13.51□□□□□ -0.25
UBE3D-203ENST00000369747 C9orf152Q5JTZ5 239 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms