RNA–Protein interactions for RNA: ENST00000369622.7

SYNCRIP-202, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYNCRIP, Length 3,023 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-202ENST00000369622 IZUMO1RA6ND01 250 aa12.92□□□□□ -0.34
SYNCRIP-202ENST00000369622 A6NJY4 79 aa12.92□□□□□ -0.34
SYNCRIP-202ENST00000369622 K7ERJ3 54 aa12.92□□□□□ -0.34
SYNCRIP-202ENST00000369622 ETDBQ3ZM63 59 aa12.92□□□□□ -0.34
SYNCRIP-202ENST00000369622 NUP35Q8NFH5 326 aa12.92□□□□□ -0.34
SYNCRIP-202ENST00000369622 FOXA2Q9Y261 457 aaPredicted RBP12.92□□□□□ -0.34
SYNCRIP-202ENST00000369622 H3BRM9 83 aa12.91□□□□□ -0.34
SYNCRIP-202ENST00000369622 CHEK1O14757 476 aa12.91□□□□□ -0.34
SYNCRIP-202ENST00000369622 PLAUP00749 431 aa12.91□□□□□ -0.34
SYNCRIP-202ENST00000369622 PRR20EP86478 221 aa12.91□□□□□ -0.34
SYNCRIP-202ENST00000369622 PRR20CP86479 221 aa12.91□□□□□ -0.34
SYNCRIP-202ENST00000369622 PRR20DP86480 221 aa12.91□□□□□ -0.34
SYNCRIP-202ENST00000369622 PRR20BP86481 221 aa12.91□□□□□ -0.34
SYNCRIP-202ENST00000369622 PRR20AP86496 221 aa12.91□□□□□ -0.34
SYNCRIP-202ENST00000369622 PLA2G2CQ5R387 149 aa12.91□□□□□ -0.34
SYNCRIP-202ENST00000369622 RNF7Q9UBF6 113 aa12.91□□□□□ -0.34
SYNCRIP-202ENST00000369622 A6NDN8 102 aa12.91□□□□□ -0.34
SYNCRIP-202ENST00000369622 FABP2P12104 132 aa12.91□□□□□ -0.34
SYNCRIP-202ENST00000369622 SEC11AP67812 179 aa12.91□□□□□ -0.34
SYNCRIP-202ENST00000369622 PRNDQ9UKY0 176 aa12.91□□□□□ -0.34
SYNCRIP-202ENST00000369622 PSMB11A5LHX3 300 aa12.91□□□□□ -0.34
SYNCRIP-202ENST00000369622 C9JCJ5 164 aa12.91□□□□□ -0.34
SYNCRIP-202ENST00000369622 NCR2O95944 276 aa12.91□□□□□ -0.34
SYNCRIP-202ENST00000369622 RTL8BQ17RB0 113 aa12.91□□□□□ -0.34
SYNCRIP-202ENST00000369622 ZNF474Q6S9Z5 364 aaPredicted RBP12.91□□□□□ -0.34
SYNCRIP-202ENST00000369622 MAP1LC3CQ9BXW4 147 aa12.91□□□□□ -0.34
SYNCRIP-202ENST00000369622 TMEM167BQ9NRX6 74 aa12.91□□□□□ -0.34
SYNCRIP-202ENST00000369622 NAV3Q8IVL0 2385 aa12.9□□□□□ -0.34
SYNCRIP-202ENST00000369622 TEX50A0A1B0GTY4 177 aa12.9□□□□□ -0.34
SYNCRIP-202ENST00000369622 GGTLC3B5MD39 225 aa12.9□□□□□ -0.34
SYNCRIP-202ENST00000369622 SEM1Q6ZVN7 128 aa12.9□□□□□ -0.34
SYNCRIP-202ENST00000369622 ARPC1AQ92747 370 aa12.9□□□□□ -0.34
SYNCRIP-202ENST00000369622 APELAP0DMC3 54 aa12.9□□□□□ -0.34
SYNCRIP-202ENST00000369622 CT45A6P0DMU7 189 aa12.9□□□□□ -0.34
SYNCRIP-202ENST00000369622 CT45A5P0DMU8 189 aa12.9□□□□□ -0.34
SYNCRIP-202ENST00000369622 CT45A7P0DMV0 189 aa12.9□□□□□ -0.34
SYNCRIP-202ENST00000369622 FAM27E3Q08E93 113 aa12.9□□□□□ -0.34
SYNCRIP-202ENST00000369622 MORN5Q5VZ52 161 aa12.9□□□□□ -0.34
SYNCRIP-202ENST00000369622 OSTCQ9NRP0 149 aa12.9□□□□□ -0.34
SYNCRIP-202ENST00000369622 SMIM27A0A1W2PRY6 76 aa12.89□□□□□ -0.35
SYNCRIP-202ENST00000369622 SAA1P0DJI8 122 aaPredicted RBP12.89□□□□□ -0.35
SYNCRIP-202ENST00000369622 COX8AP10176 69 aa12.89□□□□□ -0.35
SYNCRIP-202ENST00000369622 SCGB1A1P11684 91 aa12.89□□□□□ -0.35
SYNCRIP-202ENST00000369622 AREGP15514 252 aa12.89□□□□□ -0.35
SYNCRIP-202ENST00000369622 UBE2L3P68036 154 aaKnown RBP12.89□□□□□ -0.35
SYNCRIP-202ENST00000369622 HARBI1Q96MB7 349 aa12.89□□□□□ -0.35
SYNCRIP-202ENST00000369622 ACACAQ13085 2346 aa12.89□□□□□ -0.35
SYNCRIP-202ENST00000369622 HIGD1CA8MV81 97 aa12.89□□□□□ -0.35
SYNCRIP-202ENST00000369622 FTH1P19P0C7X4 201 aa12.89□□□□□ -0.35
SYNCRIP-202ENST00000369622 GLRXP35754 106 aa12.89□□□□□ -0.35
SYNCRIP-202ENST00000369622 C22orf34Q6ZV56 151 aa12.89□□□□□ -0.35
SYNCRIP-202ENST00000369622 ZNF503Q96F45 646 aa12.89□□□□□ -0.35
SYNCRIP-202ENST00000369622 VWC2LB2RUY7 222 aa12.88□□□□□ -0.35
SYNCRIP-202ENST00000369622 UPK2O00526 184 aa12.88□□□□□ -0.35
SYNCRIP-202ENST00000369622 PYYP10082 97 aa12.88□□□□□ -0.35
SYNCRIP-202ENST00000369622 CCL3L1P16619 93 aa12.88□□□□□ -0.35
SYNCRIP-202ENST00000369622 FXYD7P58549 80 aa12.88□□□□□ -0.35
SYNCRIP-202ENST00000369622 C10orf55Q5SWW7 151 aa12.88□□□□□ -0.35
SYNCRIP-202ENST00000369622 SAMD5Q5TGI4 173 aa12.88□□□□□ -0.35
SYNCRIP-202ENST00000369622 H1FXQ92522 213 aaKnown RBP12.88□□□□□ -0.35
SYNCRIP-202ENST00000369622 ZNF257Q9Y2Q1 563 aa12.88□□□□□ -0.35
SYNCRIP-202ENST00000369622 PPIFP30405 207 aaKnown RBP12.88□□□□□ -0.35
SYNCRIP-202ENST00000369622 TAS2R45P59539 299 aa12.88□□□□□ -0.35
SYNCRIP-202ENST00000369622 CGB3P0DN86 165 aa12.88□□□□□ -0.35
SYNCRIP-202ENST00000369622 CGB7P0DN87 165 aa12.88□□□□□ -0.35
SYNCRIP-202ENST00000369622 SSBP2P81877 361 aaPredicted RBP12.88□□□□□ -0.35
SYNCRIP-202ENST00000369622 PRCDQ00LT1 54 aa12.88□□□□□ -0.35
SYNCRIP-202ENST00000369622 C11orf52Q96A22 123 aa12.88□□□□□ -0.35
SYNCRIP-202ENST00000369622 ADTRPQ96IZ2 230 aa12.88□□□□□ -0.35
SYNCRIP-202ENST00000369622 C18orf15Q96N68 181 aa12.88□□□□□ -0.35
SYNCRIP-202ENST00000369622 SPAG8Q99932 426 aaPredicted RBP12.88□□□□□ -0.35
SYNCRIP-202ENST00000369622 RAB9BQ9NP90 201 aa12.88□□□□□ -0.35
SYNCRIP-202ENST00000369622 CNIH1O95406 144 aa12.87□□□□□ -0.35
SYNCRIP-202ENST00000369622 LHBP01229 141 aa12.87□□□□□ -0.35
SYNCRIP-202ENST00000369622 IGLV2-8P01709 118 aa12.87□□□□□ -0.35
SYNCRIP-202ENST00000369622 IGHV1-46P01743 117 aa12.87□□□□□ -0.35
SYNCRIP-202ENST00000369622 PRB4P10163 310 aaPredicted RBP12.87□□□□□ -0.35
SYNCRIP-202ENST00000369622 CR1LQ2VPA4 569 aa12.87□□□□□ -0.35
SYNCRIP-202ENST00000369622 ANXA2RQ3ZCQ2 193 aa12.87□□□□□ -0.35
SYNCRIP-202ENST00000369622 AMTNQ6UX39 209 aa12.87□□□□□ -0.35
SYNCRIP-202ENST00000369622 MRPL20Q9BYC9 149 aaKnown RBP12.87□□□□□ -0.35
SYNCRIP-202ENST00000369622 TANC2Q9HCD6 1990 aa12.87□□□□□ -0.35
SYNCRIP-202ENST00000369622 E7EUB6 86 aa12.87□□□□□ -0.35
SYNCRIP-202ENST00000369622 GCSHP23434 173 aa12.87□□□□□ -0.35
SYNCRIP-202ENST00000369622 RNF183Q96D59 192 aa12.87□□□□□ -0.35
SYNCRIP-202ENST00000369622 GAFA1Q96PS6 74 aa12.87□□□□□ -0.35
SYNCRIP-202ENST00000369622 PTPRZ1P23471 2315 aaPredicted RBP12.87□□□□□ -0.35
SYNCRIP-202ENST00000369622 SMIM17P0DL12 118 aa12.86□□□□□ -0.35
SYNCRIP-202ENST00000369622 C8orf88P0DMB2 117 aa12.86□□□□□ -0.35
SYNCRIP-202ENST00000369622 NMUP48645 174 aa12.86□□□□□ -0.35
SYNCRIP-202ENST00000369622 HERV-K104P63124 156 aa12.86□□□□□ -0.35
SYNCRIP-202ENST00000369622 OR8A1Q8NGG7 326 aa12.86□□□□□ -0.35
SYNCRIP-202ENST00000369622 MRAP2Q96G30 205 aa12.86□□□□□ -0.35
SYNCRIP-202ENST00000369622 CFHR2P36980 270 aa12.86□□□□□ -0.35
SYNCRIP-202ENST00000369622 COX19Q49B96 90 aa12.86□□□□□ -0.35
SYNCRIP-202ENST00000369622 TIMM23BQ5SRD1 257 aa12.86□□□□□ -0.35
SYNCRIP-202ENST00000369622 OR5A1Q8NGJ0 315 aa12.86□□□□□ -0.35
SYNCRIP-202ENST00000369622 OTOGLQ3ZCN5 2332 aa12.86□□□□□ -0.35
SYNCRIP-202ENST00000369622 IGHV3-21A0A0B4J1V1 117 aa12.86□□□□□ -0.35
SYNCRIP-202ENST00000369622 COX7A2P2O60397 106 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms