RNA–Protein interactions for RNA: ENST00000369409.9

PHGDH-202, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 1 (best) BASIC

Gene PHGDH, Length 1,882 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-202ENST00000369409 NKX6-2Q9C056 277 aaPredicted RBP13.05□□□□□ -0.32
PHGDH-202ENST00000369409 OR51M1Q9H341 326 aa13.05□□□□□ -0.32
PHGDH-202ENST00000369409 ZNF702PQ9H963 129 aa13.05□□□□□ -0.32
PHGDH-202ENST00000369409 GNB4Q9HAV0 340 aa13.05□□□□□ -0.32
PHGDH-202ENST00000369409 MRPL27Q9P0M9 148 aaKnown RBP13.05□□□□□ -0.32
PHGDH-202ENST00000369409 PUS1Q9Y606 427 aaKnown RBP eCLIP13.05□□□□□ -0.32
PHGDH-202ENST00000369409 IGHV3-35A0A0C4DH35 117 aa13.04□□□□□ -0.32
PHGDH-202ENST00000369409 SNAPINO95295 136 aa13.04□□□□□ -0.32
PHGDH-202ENST00000369409 BRI3O95415 125 aa13.04□□□□□ -0.32
PHGDH-202ENST00000369409 IGLV1-40P01703 118 aa13.04□□□□□ -0.32
PHGDH-202ENST00000369409 LCNL1Q6ZST4 164 aa13.04□□□□□ -0.32
PHGDH-202ENST00000369409 SMR3AQ99954 134 aa13.04□□□□□ -0.32
PHGDH-202ENST00000369409 KLK15Q9H2R5 256 aa13.04□□□□□ -0.32
PHGDH-202ENST00000369409 GAR1Q9NY12 217 aaKnown RBP13.04□□□□□ -0.32
PHGDH-202ENST00000369409 TMEM250H0YL14 139 aa13.04□□□□□ -0.32
PHGDH-202ENST00000369409 TGOLN2O43493 480 aa13.04□□□□□ -0.32
PHGDH-202ENST00000369409 ZNF329Q86UD4 541 aa13.04□□□□□ -0.32
PHGDH-202ENST00000369409 OTOGQ6ZRI0 2925 aa13.03□□□□□ -0.32
PHGDH-202ENST00000369409 H3BRN7 92 aa13.03□□□□□ -0.32
PHGDH-202ENST00000369409 ZNF600Q6ZNG1 722 aa13.03□□□□□ -0.32
PHGDH-202ENST00000369409 TMEM86BQ8N661 226 aa13.03□□□□□ -0.32
PHGDH-202ENST00000369409 CLRN3Q8NCR9 226 aa13.03□□□□□ -0.32
PHGDH-202ENST00000369409 RPUSD4Q96CM3 377 aaKnown RBP13.03□□□□□ -0.32
PHGDH-202ENST00000369409 FXYD5Q96DB9 178 aa13.03□□□□□ -0.32
PHGDH-202ENST00000369409 ZNF414Q96IQ9 312 aa13.03□□□□□ -0.32
PHGDH-202ENST00000369409 C20orf24Q9BUV8 137 aa13.03□□□□□ -0.32
PHGDH-202ENST00000369409 ARL2-SNX15V9GYD0 113 aa13.03□□□□□ -0.32
PHGDH-202ENST00000369409 DNAJC9-AS1A6NH13 148 aa13.02□□□□□ -0.32
PHGDH-202ENST00000369409 PPP5D1E7EU14 171 aa13.02□□□□□ -0.32
PHGDH-202ENST00000369409 PDE6DO43924 150 aa13.02□□□□□ -0.32
PHGDH-202ENST00000369409 SNRPCP09234 159 aaKnown RBP13.02□□□□□ -0.32
PHGDH-202ENST00000369409 GP9P14770 177 aa13.02□□□□□ -0.32
PHGDH-202ENST00000369409 ZNF674Q2M3X9 581 aa13.02□□□□□ -0.32
PHGDH-202ENST00000369409 STXBP6Q8NFX7 210 aa13.02□□□□□ -0.32
PHGDH-202ENST00000369409 TXNDC17Q9BRA2 123 aa13.02□□□□□ -0.32
PHGDH-202ENST00000369409 SHANK2-AS3Q9BTD1 123 aa13.02□□□□□ -0.32
PHGDH-202ENST00000369409 IGHV3OR16-8A0A075B7F1 116 aa13.02□□□□□ -0.33
PHGDH-202ENST00000369409 H3BQ15 152 aa13.02□□□□□ -0.33
PHGDH-202ENST00000369409 M0R036 132 aa13.02□□□□□ -0.33
PHGDH-202ENST00000369409 NDUFS6O75380 124 aaKnown RBP13.02□□□□□ -0.33
PHGDH-202ENST00000369409 AWAT1Q58HT5 328 aa13.02□□□□□ -0.33
PHGDH-202ENST00000369409 C10orf99Q6UWK7 81 aa13.02□□□□□ -0.33
PHGDH-202ENST00000369409 USMG5Q96IX5 58 aa13.02□□□□□ -0.33
PHGDH-202ENST00000369409 NIPSNAP3BQ9BS92 247 aa13.02□□□□□ -0.33
PHGDH-202ENST00000369409 PARLQ9H300 379 aa13.02□□□□□ -0.33
PHGDH-202ENST00000369409 TMA7Q9Y2S6 64 aaKnown RBP13.02□□□□□ -0.33
PHGDH-202ENST00000369409 SCO2A0A1W2PP80 73 aa13.01□□□□□ -0.33
PHGDH-202ENST00000369409 ZNF727A8MUV8 499 aa13.01□□□□□ -0.33
PHGDH-202ENST00000369409 F6UZH7 168 aa13.01□□□□□ -0.33
PHGDH-202ENST00000369409 IGHV3-11P01762 117 aa13.01□□□□□ -0.33
PHGDH-202ENST00000369409 IGHG4P01861 327 aa13.01□□□□□ -0.33
PHGDH-202ENST00000369409 NPPCP23582 126 aa13.01□□□□□ -0.33
PHGDH-202ENST00000369409 SMIM7Q9BQ49 75 aa13.01□□□□□ -0.33
PHGDH-202ENST00000369409 GGTLC3B5MD39 225 aa13□□□□□ -0.33
PHGDH-202ENST00000369409 RAB9AP51151 201 aa13□□□□□ -0.33
PHGDH-202ENST00000369409 TOMM20LQ6UXN7 152 aa13□□□□□ -0.33
PHGDH-202ENST00000369409 BLNKQ8WV28 456 aa13□□□□□ -0.33
PHGDH-202ENST00000369409 ATP6V0BQ99437 205 aa13□□□□□ -0.33
PHGDH-202ENST00000369409 ZFAND3Q9H8U3 227 aa13□□□□□ -0.33
PHGDH-202ENST00000369409 A0A1W2PRE2 83 aa12.99□□□□□ -0.33
PHGDH-202ENST00000369409 TRBV12-3P01733 135 aa12.99□□□□□ -0.33
PHGDH-202ENST00000369409 PSMB8P28062 276 aa12.99□□□□□ -0.33
PHGDH-202ENST00000369409 ARL3P36405 182 aa12.99□□□□□ -0.33
PHGDH-202ENST00000369409 BTN1A1Q13410 526 aa12.99□□□□□ -0.33
PHGDH-202ENST00000369409 LOC105371267A0A1B0GV96 52 aa12.99□□□□□ -0.33
PHGDH-202ENST00000369409 ZNF98A6NK75 572 aa12.99□□□□□ -0.33
PHGDH-202ENST00000369409 BMPR1BO00238 502 aa12.99□□□□□ -0.33
PHGDH-202ENST00000369409 DERL1Q9BUN8 251 aa12.99□□□□□ -0.33
PHGDH-202ENST00000369409 ESM1Q9NQ30 184 aa12.99□□□□□ -0.33
PHGDH-202ENST00000369409 TMEM160Q9NX00 188 aa12.99□□□□□ -0.33
PHGDH-202ENST00000369409 RABAC1Q9UI14 185 aa12.99□□□□□ -0.33
PHGDH-202ENST00000369409 A0A0G2JLM5 398 aa12.98□□□□□ -0.33
PHGDH-202ENST00000369409 H3BTX0 84 aa12.98□□□□□ -0.33
PHGDH-202ENST00000369409 NDUFB4O95168 129 aa12.98□□□□□ -0.33
PHGDH-202ENST00000369409 LY6G6DO95868 133 aa12.98□□□□□ -0.33
PHGDH-202ENST00000369409 RELQ04864 619 aaPredicted RBP12.98□□□□□ -0.33
PHGDH-202ENST00000369409 S100A7AQ86SG5 101 aa12.98□□□□□ -0.33
PHGDH-202ENST00000369409 TVP23CQ96ET8 276 aa12.98□□□□□ -0.33
PHGDH-202ENST00000369409 TMEM14CQ9P0S9 112 aa12.98□□□□□ -0.33
PHGDH-202ENST00000369409 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.97□□□□□ -0.33
PHGDH-202ENST00000369409 AKR1C3P42330 323 aa12.97□□□□□ -0.33
PHGDH-202ENST00000369409 SUMO1P63165 101 aaKnown RBP12.97□□□□□ -0.33
PHGDH-202ENST00000369409 SLC35B1P78383 322 aa12.97□□□□□ -0.33
PHGDH-202ENST00000369409 BPIFA4PQ86YQ2 179 aa12.97□□□□□ -0.33
PHGDH-202ENST00000369409 Q8N2B8 174 aa12.97□□□□□ -0.33
PHGDH-202ENST00000369409 OR4X2Q8NGF9 303 aa12.97□□□□□ -0.33
PHGDH-202ENST00000369409 MTORP42345 2549 aa12.97□□□□□ -0.33
PHGDH-202ENST00000369409 FAM181BA6NEQ2 426 aa12.97□□□□□ -0.33
PHGDH-202ENST00000369409 NBEAP1P0C6P0 100 aa12.97□□□□□ -0.33
PHGDH-202ENST00000369409 SCGB2A2Q13296 93 aa12.97□□□□□ -0.33
PHGDH-202ENST00000369409 FAM74A3Q4VXF1 159 aa12.97□□□□□ -0.33
PHGDH-202ENST00000369409 ZNF343Q6P1L6 599 aa12.97□□□□□ -0.33
PHGDH-202ENST00000369409 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.97□□□□□ -0.33
PHGDH-202ENST00000369409 C11orf52Q96A22 123 aa12.97□□□□□ -0.33
PHGDH-202ENST00000369409 NAT8Q9UHE5 227 aa12.97□□□□□ -0.33
PHGDH-202ENST00000369409 TMEM89A2RUT3 159 aa12.96□□□□□ -0.33
PHGDH-202ENST00000369409 C7orf77A4D0Y5 90 aa12.96□□□□□ -0.33
PHGDH-202ENST00000369409 SRD5A1P18405 259 aa12.96□□□□□ -0.33
PHGDH-202ENST00000369409 RANP62826 216 aaKnown RBP12.96□□□□□ -0.33
PHGDH-202ENST00000369409 TMEM88Q6PEY1 159 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms