RNA–Protein interactions for RNA: ENST00000368838.1

SNX27-201, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best) BASIC

Gene SNX27, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-201ENST00000368838 CDC34P49427 236 aaPredicted RBP6.82□□□□□ -1.32
SNX27-201ENST00000368838 RND2P52198 227 aa6.82□□□□□ -1.32
SNX27-201ENST00000368838 MFAP4P55083 255 aa6.82□□□□□ -1.32
SNX27-201ENST00000368838 ZNF616Q08AN1 781 aa6.82□□□□□ -1.32
SNX27-201ENST00000368838 PEA15Q15121 130 aa6.82□□□□□ -1.32
SNX27-201ENST00000368838 BEAN1Q3B7T3 259 aa6.82□□□□□ -1.32
SNX27-201ENST00000368838 ZNF506Q5JVG8 444 aa6.82□□□□□ -1.32
SNX27-201ENST00000368838 PQLC2Q6ZP29 291 aa6.82□□□□□ -1.32
SNX27-201ENST00000368838 SLC35E3Q7Z769 313 aa6.82□□□□□ -1.32
SNX27-201ENST00000368838 RNF152Q8N8N0 203 aa6.82□□□□□ -1.32
SNX27-201ENST00000368838 OR2T6Q8NHC8 308 aa6.82□□□□□ -1.32
SNX27-201ENST00000368838 SFT2D1Q8WV19 159 aa6.82□□□□□ -1.32
SNX27-201ENST00000368838 NPIPB3Q92617 1050 aa6.82□□□□□ -1.32
SNX27-201ENST00000368838 RAB24Q969Q5 203 aa6.82□□□□□ -1.32
SNX27-201ENST00000368838 USMG5Q96IX5 58 aa6.82□□□□□ -1.32
SNX27-201ENST00000368838 SEC11CQ9BY50 192 aa6.82□□□□□ -1.32
SNX27-201ENST00000368838 MAP1LC3BQ9GZQ8 125 aa6.82□□□□□ -1.32
SNX27-201ENST00000368838 CARHSP1Q9Y2V2 147 aaKnown RBP6.82□□□□□ -1.32
SNX27-201ENST00000368838 TRBV7-1A0A0A6YYK4 115 aa6.81□□□□□ -1.32
SNX27-201ENST00000368838 A0A1W2PPV4 95 aa6.81□□□□□ -1.32
SNX27-201ENST00000368838 ZFP92A6NM28 416 aa6.81□□□□□ -1.32
SNX27-201ENST00000368838 TMEM250H0YL14 139 aa6.81□□□□□ -1.32
SNX27-201ENST00000368838 NDUFB8O95169 186 aa6.81□□□□□ -1.32
SNX27-201ENST00000368838 CXorf1O96002 111 aa6.81□□□□□ -1.32
SNX27-201ENST00000368838 TOMM40O96008 361 aa6.81□□□□□ -1.32
SNX27-201ENST00000368838 IFNA1P01562 189 aa6.81□□□□□ -1.32
SNX27-201ENST00000368838 IGKV1-17P01599 117 aa6.81□□□□□ -1.32
SNX27-201ENST00000368838 TAS2R45P59539 299 aa6.81□□□□□ -1.32
SNX27-201ENST00000368838 MLANAQ16655 118 aa6.81□□□□□ -1.32
SNX27-201ENST00000368838 GUK1Q16774 197 aa6.81□□□□□ -1.32
SNX27-201ENST00000368838 MIC13Q5XKP0 118 aa6.81□□□□□ -1.32
SNX27-201ENST00000368838 UNQ5815/PRO19632Q6UWF5 114 aa6.81□□□□□ -1.32
SNX27-201ENST00000368838 BPIFCQ8NFQ6 507 aa6.81□□□□□ -1.32
SNX27-201ENST00000368838 ZNF502Q8TBZ5 544 aa6.81□□□□□ -1.32
SNX27-201ENST00000368838 MISP3Q96FF7 219 aa6.81□□□□□ -1.32
SNX27-201ENST00000368838 TCEAL7Q9BRU2 100 aa6.81□□□□□ -1.32
SNX27-201ENST00000368838 NKX6-2Q9C056 277 aaPredicted RBP6.81□□□□□ -1.32
SNX27-201ENST00000368838 VSIRQ9H7M9 311 aa6.81□□□□□ -1.32
SNX27-201ENST00000368838 ZNF702PQ9H963 129 aa6.81□□□□□ -1.32
SNX27-201ENST00000368838 DNAJC4Q9NNZ3 241 aa6.81□□□□□ -1.32
SNX27-201ENST00000368838 MANBALQ9NQG1 85 aa6.81□□□□□ -1.32
SNX27-201ENST00000368838 C21orf62Q9NYP8 219 aa6.81□□□□□ -1.32
SNX27-201ENST00000368838 TECRQ9NZ01 308 aaKnown RBP6.81□□□□□ -1.32
SNX27-201ENST00000368838 MRPL36Q9P0J6 103 aaKnown RBP6.81□□□□□ -1.32
SNX27-201ENST00000368838 FUT9Q9Y231 359 aa6.81□□□□□ -1.32
SNX27-201ENST00000368838 RBFOX3A6NFN3 312 aa6.8□□□□□ -1.32
SNX27-201ENST00000368838 IGHG4P01861 327 aa6.8□□□□□ -1.32
SNX27-201ENST00000368838 BCL2P10415 239 aa6.8□□□□□ -1.32
SNX27-201ENST00000368838 RAB9AP51151 201 aa6.8□□□□□ -1.32
SNX27-201ENST00000368838 PCNPQ8WW12 178 aaKnown RBP6.8□□□□□ -1.32
SNX27-201ENST00000368838 TMEM37Q8WXS4 190 aa6.8□□□□□ -1.32
SNX27-201ENST00000368838 FAM103A1Q9BTL3 118 aaKnown RBP6.8□□□□□ -1.32
SNX27-201ENST00000368838 PRSS22Q9GZN4 317 aa6.8□□□□□ -1.32
SNX27-201ENST00000368838 NPFFR1Q9GZQ6 430 aa6.8□□□□□ -1.32
SNX27-201ENST00000368838 TMEM167BQ9NRX6 74 aa6.8□□□□□ -1.32
SNX27-201ENST00000368838 SERTAD4Q9NUC0 356 aa6.8□□□□□ -1.32
SNX27-201ENST00000368838 MRPL27Q9P0M9 148 aaKnown RBP6.8□□□□□ -1.32
SNX27-201ENST00000368838 VAX2Q9UIW0 290 aa6.8□□□□□ -1.32
SNX27-201ENST00000368838 RFNGQ9Y644 331 aa6.8□□□□□ -1.32
SNX27-201ENST00000368838 A0A0G2JLM5 398 aa6.79□□□□□ -1.32
SNX27-201ENST00000368838 LOC102723971A0A1B0GUV8 181 aa6.79□□□□□ -1.32
SNX27-201ENST00000368838 WI2-2373I1.2A0A1W2PRP0 233 aa6.79□□□□□ -1.32
SNX27-201ENST00000368838 A0A1W2PRX2 142 aa6.79□□□□□ -1.32
SNX27-201ENST00000368838 REG1AP05451 166 aa6.79□□□□□ -1.32
SNX27-201ENST00000368838 CTSGP08311 255 aa6.79□□□□□ -1.32
SNX27-201ENST00000368838 C8orf88P0DMB2 117 aa6.79□□□□□ -1.32
SNX27-201ENST00000368838 ELLP55199 621 aaPredicted RBP6.79□□□□□ -1.32
SNX27-201ENST00000368838 OR51G1Q8NGK1 321 aa6.79□□□□□ -1.32
SNX27-201ENST00000368838 MYOZ3Q8TDC0 251 aa6.79□□□□□ -1.32
SNX27-201ENST00000368838 ACY3Q96HD9 319 aa6.79□□□□□ -1.32
SNX27-201ENST00000368838 CITED2Q99967 270 aaPredicted RBP6.79□□□□□ -1.32
SNX27-201ENST00000368838 SLC35B3Q9H1N7 401 aa6.79□□□□□ -1.32
SNX27-201ENST00000368838 SEPSECSQ9HD40 501 aaKnown RBP6.79□□□□□ -1.32
SNX27-201ENST00000368838 TMEM14CQ9P0S9 112 aa6.79□□□□□ -1.32
SNX27-201ENST00000368838 A0A1W2PRE2 83 aa6.78□□□□□ -1.32
SNX27-201ENST00000368838 I3L521 148 aa6.78□□□□□ -1.32
SNX27-201ENST00000368838 GNG7O60262 68 aa6.78□□□□□ -1.32
SNX27-201ENST00000368838 ELANEP08246 267 aa6.78□□□□□ -1.32
SNX27-201ENST00000368838 RD3LP0DJH9 198 aa6.78□□□□□ -1.32
SNX27-201ENST00000368838 PSG1P11464 419 aa6.78□□□□□ -1.32
SNX27-201ENST00000368838 PSMB8P28062 276 aa6.78□□□□□ -1.32
SNX27-201ENST00000368838 BLCAPP62952 87 aa6.78□□□□□ -1.32
SNX27-201ENST00000368838 CCL20P78556 96 aa6.78□□□□□ -1.32
SNX27-201ENST00000368838 FAM74A3Q4VXF1 159 aa6.78□□□□□ -1.32
SNX27-201ENST00000368838 FAM78BQ5VT40 261 aa6.78□□□□□ -1.32
SNX27-201ENST00000368838 ZNF343Q6P1L6 599 aa6.78□□□□□ -1.32
SNX27-201ENST00000368838 PATE2Q6UY27 113 aa6.78□□□□□ -1.32
SNX27-201ENST00000368838 SSX7Q7RTT5 188 aa6.78□□□□□ -1.32
SNX27-201ENST00000368838 ZNF491Q8N8L2 437 aa6.78□□□□□ -1.32
SNX27-201ENST00000368838 MRAPQ8TCY5 172 aa6.78□□□□□ -1.32
SNX27-201ENST00000368838 Q8WTZ3 238 aa6.78□□□□□ -1.32
SNX27-201ENST00000368838 EEF1AKMT3Q96AZ1 226 aa6.78□□□□□ -1.32
SNX27-201ENST00000368838 FAM167A-AS1Q96KT0 104 aa6.78□□□□□ -1.32
SNX27-201ENST00000368838 COL7A1Q02388 2944 aa6.78□□□□□ -1.32
SNX27-201ENST00000368838 SH2D7A6NKC9 451 aaPredicted RBP6.77□□□□□ -1.32
SNX27-201ENST00000368838 LINC01548A6NM66 108 aa6.77□□□□□ -1.32
SNX27-201ENST00000368838 PDE6DO43924 150 aa6.77□□□□□ -1.32
SNX27-201ENST00000368838 HYPMO75409 117 aa6.77□□□□□ -1.32
SNX27-201ENST00000368838 SRP19P09132 144 aaKnown RBP6.77□□□□□ -1.32
SNX27-201ENST00000368838 RHOGP84095 191 aa6.77□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms