RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 OR10G9Q8NGN4 311 aa6.85□□□□□ -1.31
TPM3-213ENST00000368545 OR10G7Q8NGN6 311 aa6.85□□□□□ -1.31
TPM3-213ENST00000368545 SFT2D1Q8WV19 159 aa6.85□□□□□ -1.31
TPM3-213ENST00000368545 ACTR3CQ9C0K3 210 aaPredicted RBP6.85□□□□□ -1.31
TPM3-213ENST00000368545 SMDT1Q9H4I9 107 aa6.85□□□□□ -1.31
TPM3-213ENST00000368545 VSIRQ9H7M9 311 aa6.85□□□□□ -1.31
TPM3-213ENST00000368545 PITPNC1Q9UKF7 332 aa6.85□□□□□ -1.31
TPM3-213ENST00000368545 MOB4Q9Y3A3 225 aa6.85□□□□□ -1.31
TPM3-213ENST00000368545 RNF114Q9Y508 228 aa6.85□□□□□ -1.31
TPM3-213ENST00000368545 PXMP4Q9Y6I8 212 aa6.85□□□□□ -1.31
TPM3-213ENST00000368545 SONP18583 2426 aaKnown RBP6.85□□□□□ -1.31
TPM3-213ENST00000368545 CRYGCP07315 174 aa6.84□□□□□ -1.31
TPM3-213ENST00000368545 DEFA4P12838 97 aa6.84□□□□□ -1.31
TPM3-213ENST00000368545 KLF17Q5JT82 389 aaPredicted RBP6.84□□□□□ -1.31
TPM3-213ENST00000368545 RPP25LQ8N5L8 163 aaKnown RBP6.84□□□□□ -1.31
TPM3-213ENST00000368545 SLC25A33Q9BSK2 321 aa6.84□□□□□ -1.31
TPM3-213ENST00000368545 FNDC4Q9H6D8 234 aaPredicted RBP6.84□□□□□ -1.31
TPM3-213ENST00000368545 SLC39A9Q9NUM3 307 aa6.84□□□□□ -1.31
TPM3-213ENST00000368545 IGHV7-81A0A0B4J1V7 117 aa6.83□□□□□ -1.32
TPM3-213ENST00000368545 MAP1LC3B2A6NCE7 125 aa6.83□□□□□ -1.32
TPM3-213ENST00000368545 SEC14L6B5MCN3 397 aa6.83□□□□□ -1.32
TPM3-213ENST00000368545 CDC34P49427 236 aaPredicted RBP6.83□□□□□ -1.32
TPM3-213ENST00000368545 GAGE2BQ13066 116 aa6.83□□□□□ -1.32
TPM3-213ENST00000368545 PEA15Q15121 130 aa6.83□□□□□ -1.32
TPM3-213ENST00000368545 ZNF726P1Q15940 193 aa6.83□□□□□ -1.32
TPM3-213ENST00000368545 GAGE2EQ4V326 116 aa6.83□□□□□ -1.32
TPM3-213ENST00000368545 GAGE2AQ6NT46 116 aa6.83□□□□□ -1.32
TPM3-213ENST00000368545 SPSB3Q6PJ21 355 aa6.83□□□□□ -1.32
TPM3-213ENST00000368545 C16orf82Q7Z2V1 217 aa6.83□□□□□ -1.32
TPM3-213ENST00000368545 C5orf56Q8N8D9 126 aa6.83□□□□□ -1.32
TPM3-213ENST00000368545 THAP8Q8NA92 274 aa6.83□□□□□ -1.32
TPM3-213ENST00000368545 NARS2Q96I59 477 aaKnown RBP6.83□□□□□ -1.32
TPM3-213ENST00000368545 SSX3Q99909 188 aa6.83□□□□□ -1.32
TPM3-213ENST00000368545 MAP1LC3BQ9GZQ8 125 aa6.83□□□□□ -1.32
TPM3-213ENST00000368545 TREM1Q9NP99 234 aa6.83□□□□□ -1.32
TPM3-213ENST00000368545 GAGE2DQ9UEU5 116 aa6.83□□□□□ -1.32
TPM3-213ENST00000368545 M0QZK8 103 aa6.83□□□□□ -1.32
TPM3-213ENST00000368545 CD5P06127 495 aa6.83□□□□□ -1.32
TPM3-213ENST00000368545 APELAP0DMC3 54 aa6.83□□□□□ -1.32
TPM3-213ENST00000368545 SELENOTP62341 195 aa6.83□□□□□ -1.32
TPM3-213ENST00000368545 NDPQ00604 133 aa6.83□□□□□ -1.32
TPM3-213ENST00000368545 GUK1Q16774 197 aa6.83□□□□□ -1.32
TPM3-213ENST00000368545 MIC13Q5XKP0 118 aa6.83□□□□□ -1.32
TPM3-213ENST00000368545 TTC9CQ8N5M4 171 aa6.83□□□□□ -1.32
TPM3-213ENST00000368545 BPIFCQ8NFQ6 507 aa6.83□□□□□ -1.32
TPM3-213ENST00000368545 ACY3Q96HD9 319 aa6.83□□□□□ -1.32
TPM3-213ENST00000368545 C8orf49Q96NF6 230 aa6.83□□□□□ -1.32
TPM3-213ENST00000368545 TXN2Q99757 166 aa6.83□□□□□ -1.32
TPM3-213ENST00000368545 ATG101Q9BSB4 218 aa6.83□□□□□ -1.32
TPM3-213ENST00000368545 EIF5A2Q9GZV4 153 aaKnown RBP6.83□□□□□ -1.32
TPM3-213ENST00000368545 SLC25A22Q9H936 323 aa6.83□□□□□ -1.32
TPM3-213ENST00000368545 THYN1Q9P016 225 aa6.83□□□□□ -1.32
TPM3-213ENST00000368545 IGKV1OR2-108A0A075B7D4 117 aa6.82□□□□□ -1.32
TPM3-213ENST00000368545 A0A1W2PPV4 95 aa6.82□□□□□ -1.32
TPM3-213ENST00000368545 TCRBV4S1A1TA0A5B7 111 aa6.82□□□□□ -1.32
TPM3-213ENST00000368545 TMEM218A2RU14 115 aa6.82□□□□□ -1.32
TPM3-213ENST00000368545 MT-CO2P00403 227 aa6.82□□□□□ -1.32
TPM3-213ENST00000368545 IFNA1P01562 189 aa6.82□□□□□ -1.32
TPM3-213ENST00000368545 NPBWR1P48145 328 aa6.82□□□□□ -1.32
TPM3-213ENST00000368545 MFAP2P55001 183 aa6.82□□□□□ -1.32
TPM3-213ENST00000368545 PNRC1Q12796 327 aaPredicted RBP6.82□□□□□ -1.32
TPM3-213ENST00000368545 FAM122CQ6P4D5 195 aa6.82□□□□□ -1.32
TPM3-213ENST00000368545 CYP2G1PQ6ZSU1 146 aa6.82□□□□□ -1.32
TPM3-213ENST00000368545 C9orf139Q6ZV77 190 aa6.82□□□□□ -1.32
TPM3-213ENST00000368545 NANPQ8TBE9 248 aa6.82□□□□□ -1.32
TPM3-213ENST00000368545 PIFOQ8TCI5 191 aa6.82□□□□□ -1.32
TPM3-213ENST00000368545 LINC00052Q96N35 136 aa6.82□□□□□ -1.32
TPM3-213ENST00000368545 FAM103A1Q9BTL3 118 aaKnown RBP6.82□□□□□ -1.32
TPM3-213ENST00000368545 A0A1B0GV50 99 aa6.82□□□□□ -1.32
TPM3-213ENST00000368545 ZFP92A6NM28 416 aa6.82□□□□□ -1.32
TPM3-213ENST00000368545 H3BUX3 64 aa6.82□□□□□ -1.32
TPM3-213ENST00000368545 YIF1AO95070 293 aa6.82□□□□□ -1.32
TPM3-213ENST00000368545 FSHBP01225 129 aa6.82□□□□□ -1.32
TPM3-213ENST00000368545 OR10J1P30954 320 aa6.82□□□□□ -1.32
TPM3-213ENST00000368545 TAGLN2P37802 199 aaKnown RBP6.82□□□□□ -1.32
TPM3-213ENST00000368545 PPT1P50897 306 aa6.82□□□□□ -1.32
TPM3-213ENST00000368545 RND2P52198 227 aa6.82□□□□□ -1.32
TPM3-213ENST00000368545 RHOBP62745 196 aa6.82□□□□□ -1.32
TPM3-213ENST00000368545 LCN15Q6UWW0 184 aa6.82□□□□□ -1.32
TPM3-213ENST00000368545 SSX7Q7RTT5 188 aa6.82□□□□□ -1.32
TPM3-213ENST00000368545 OR2T6Q8NHC8 308 aa6.82□□□□□ -1.32
TPM3-213ENST00000368545 TRGV9Q99603 122 aa6.82□□□□□ -1.32
TPM3-213ENST00000368545 A6NDX4 124 aa6.81□□□□□ -1.32
TPM3-213ENST00000368545 RBFOX3A6NFN3 312 aa6.81□□□□□ -1.32
TPM3-213ENST00000368545 I3L2K1 104 aa6.81□□□□□ -1.32
TPM3-213ENST00000368545 HIST1H1BP16401 226 aaKnown RBP6.81□□□□□ -1.32
TPM3-213ENST00000368545 CRIP2P52943 208 aaPredicted RBP6.81□□□□□ -1.32
TPM3-213ENST00000368545 OR4X1Q8NH49 305 aa6.81□□□□□ -1.32
TPM3-213ENST00000368545 PFDN5Q99471 154 aa6.81□□□□□ -1.32
TPM3-213ENST00000368545 RNF2Q99496 336 aa6.81□□□□□ -1.32
TPM3-213ENST00000368545 HSPB9Q9BQS6 159 aa6.81□□□□□ -1.32
TPM3-213ENST00000368545 SEC11CQ9BY50 192 aa6.81□□□□□ -1.32
TPM3-213ENST00000368545 TMEM231Q9H6L2 316 aa6.81□□□□□ -1.32
TPM3-213ENST00000368545 MANBALQ9NQG1 85 aa6.81□□□□□ -1.32
TPM3-213ENST00000368545 DMRT1Q9Y5R6 373 aa6.81□□□□□ -1.32
TPM3-213ENST00000368545 SVEP1Q4LDE5 3571 aa6.81□□□□□ -1.32
TPM3-213ENST00000368545 IGLV11-55A0A075B6I3 123 aa6.8□□□□□ -1.32
TPM3-213ENST00000368545 ATP6V0E1O15342 81 aa6.8□□□□□ -1.32
TPM3-213ENST00000368545 SCGB2A1O75556 95 aa6.8□□□□□ -1.32
TPM3-213ENST00000368545 LINC00869P0C866 280 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms