RNA–Protein interactions for RNA: ENST00000368287.1

ECHDC1-201, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-201ENST00000368287 M0R378 163 aa0.71□□□□□ -2.3
ECHDC1-201ENST00000368287 TAX1BP3O14907 124 aa0.71□□□□□ -2.3
ECHDC1-201ENST00000368287 CST8O60676 142 aa0.71□□□□□ -2.3
ECHDC1-201ENST00000368287 TIMM17BO60830 172 aa0.71□□□□□ -2.3
ECHDC1-201ENST00000368287 ATP5HO75947 161 aa0.71□□□□□ -2.3
ECHDC1-201ENST00000368287 C1QBP02746 253 aa0.71□□□□□ -2.3
ECHDC1-201ENST00000368287 HOXA6P31267 233 aa0.71□□□□□ -2.3
ECHDC1-201ENST00000368287 ANP32AP39687 249 aaKnown RBP0.71□□□□□ -2.3
ECHDC1-201ENST00000368287 GDF5OSQ5U4N7 250 aa0.71□□□□□ -2.3
ECHDC1-201ENST00000368287 EXOC3-AS1Q8N2X6 119 aa0.71□□□□□ -2.3
ECHDC1-201ENST00000368287 RASL12Q9NYN1 266 aa0.71□□□□□ -2.3
ECHDC1-201ENST00000368287 E9PCH4 1651 aa0.71□□□□□ -2.3
ECHDC1-201ENST00000368287 FMN1Q68DA7 1419 aa0.71□□□□□ -2.3
ECHDC1-201ENST00000368287 NOTCH1P46531 2555 aa0.7□□□□□ -2.3
ECHDC1-201ENST00000368287 NDUFB3O43676 98 aa0.7□□□□□ -2.3
ECHDC1-201ENST00000368287 AKIRIN2Q53H80 203 aa0.7□□□□□ -2.3
ECHDC1-201ENST00000368287 OR2T35Q8NGX2 323 aa0.7□□□□□ -2.3
ECHDC1-201ENST00000368287 PHB2Q99623 299 aa0.7□□□□□ -2.3
ECHDC1-201ENST00000368287 C14orf132Q9NPU4 83 aa0.7□□□□□ -2.3
ECHDC1-201ENST00000368287 MED29Q9NX70 200 aa0.7□□□□□ -2.3
ECHDC1-201ENST00000368287 TAS2R7Q9NYW3 318 aa0.7□□□□□ -2.3
ECHDC1-201ENST00000368287 NUP98P52948 1817 aa0.7□□□□□ -2.3
ECHDC1-201ENST00000368287 MIA2Q96PC5 1412 aa0.7□□□□□ -2.3
ECHDC1-201ENST00000368287 TMEM256-PLSCR3K7ERE1 68 aa0.69□□□□□ -2.3
ECHDC1-201ENST00000368287 CCL25O15444 150 aa0.69□□□□□ -2.3
ECHDC1-201ENST00000368287 DHFRP00374 187 aa0.69□□□□□ -2.3
ECHDC1-201ENST00000368287 ROMO1P60602 79 aa0.69□□□□□ -2.3
ECHDC1-201ENST00000368287 HSPE1P61604 102 aaKnown RBP0.69□□□□□ -2.3
ECHDC1-201ENST00000368287 C22orf39Q6P5X5 142 aa0.69□□□□□ -2.3
ECHDC1-201ENST00000368287 TEX47Q8TBZ9 253 aa0.69□□□□□ -2.3
ECHDC1-201ENST00000368287 PATE1Q8WXA2 126 aa0.69□□□□□ -2.3
ECHDC1-201ENST00000368287 LINC00526Q96FQ7 95 aa0.69□□□□□ -2.3
ECHDC1-201ENST00000368287 CHMP6Q96FZ7 201 aa0.69□□□□□ -2.3
ECHDC1-201ENST00000368287 MYH2Q9UKX2 1941 aa0.69□□□□□ -2.3
ECHDC1-201ENST00000368287 MYO18AQ92614 2054 aaKnown RBP0.69□□□□□ -2.3
ECHDC1-201ENST00000368287 UBR2Q8IWV8 1755 aa0.68□□□□□ -2.3
ECHDC1-201ENST00000368287 CCL16O15467 120 aa0.68□□□□□ -2.3
ECHDC1-201ENST00000368287 CD2P06729 351 aa0.68□□□□□ -2.3
ECHDC1-201ENST00000368287 NCALDP61601 193 aa0.68□□□□□ -2.3
ECHDC1-201ENST00000368287 MRPS15P82914 257 aaKnown RBP0.68□□□□□ -2.3
ECHDC1-201ENST00000368287 MPV17LQ2QL34 196 aa0.68□□□□□ -2.3
ECHDC1-201ENST00000368287 HACD4Q5VWC8 232 aa0.68□□□□□ -2.3
ECHDC1-201ENST00000368287 OR10K1Q8NGX5 313 aa0.68□□□□□ -2.3
ECHDC1-201ENST00000368287 SLC25A21Q9BQT8 299 aaPredicted RBP0.68□□□□□ -2.3
ECHDC1-201ENST00000368287 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.67□□□□□ -2.3
ECHDC1-201ENST00000368287 TRGV10A0A0A0MS01 117 aa0.67□□□□□ -2.3
ECHDC1-201ENST00000368287 TCRBV4S1A1TA0A5B7 111 aa0.67□□□□□ -2.3
ECHDC1-201ENST00000368287 KLF7O75840 302 aaPredicted RBP0.67□□□□□ -2.3
ECHDC1-201ENST00000368287 DNAL4O96015 105 aa0.67□□□□□ -2.3
ECHDC1-201ENST00000368287 IFNA7P01567 189 aa0.67□□□□□ -2.3
ECHDC1-201ENST00000368287 PRB4P10163 310 aaPredicted RBP0.67□□□□□ -2.3
ECHDC1-201ENST00000368287 UBE2BP63146 152 aa0.67□□□□□ -2.3
ECHDC1-201ENST00000368287 MRPS25P82663 173 aaKnown RBP0.67□□□□□ -2.3
ECHDC1-201ENST00000368287 DHRS4L2Q6PKH6 230 aa0.67□□□□□ -2.3
ECHDC1-201ENST00000368287 ST6GALNAC3Q8NDV1 305 aa0.67□□□□□ -2.3
ECHDC1-201ENST00000368287 PXT1Q8NFP0 134 aa0.67□□□□□ -2.3
ECHDC1-201ENST00000368287 TMEM254Q8TBM7 123 aa0.67□□□□□ -2.3
ECHDC1-201ENST00000368287 IMUPQ9GZP8 106 aa0.67□□□□□ -2.3
ECHDC1-201ENST00000368287 PCTPQ9UKL6 214 aa0.67□□□□□ -2.3
ECHDC1-201ENST00000368287 PTPRFP10586 1907 aa0.67□□□□□ -2.3
ECHDC1-201ENST00000368287 MYH3P11055 1940 aa0.67□□□□□ -2.3
ECHDC1-201ENST00000368287 ARHGEF11O15085 1522 aa0.67□□□□□ -2.3
ECHDC1-201ENST00000368287 N4BP2Q86UW6 1770 aaPredicted RBP0.67□□□□□ -2.3
ECHDC1-201ENST00000368287 TRBV6-4A0A1B0GX49 114 aa0.66□□□□□ -2.3
ECHDC1-201ENST00000368287 A8MWV9 139 aa0.66□□□□□ -2.3
ECHDC1-201ENST00000368287 BANF1O75531 89 aa0.66□□□□□ -2.3
ECHDC1-201ENST00000368287 INSL3P51460 131 aa0.66□□□□□ -2.3
ECHDC1-201ENST00000368287 GNG5P63218 68 aa0.66□□□□□ -2.3
ECHDC1-201ENST00000368287 BCL2L15Q5TBC7 163 aa0.66□□□□□ -2.3
ECHDC1-201ENST00000368287 Q8TAT8 98 aa0.66□□□□□ -2.3
ECHDC1-201ENST00000368287 BORCS5Q969J3 196 aa0.66□□□□□ -2.3
ECHDC1-201ENST00000368287 CEP19Q96LK0 163 aa0.66□□□□□ -2.3
ECHDC1-201ENST00000368287 YPEL2Q96QA6 119 aa0.66□□□□□ -2.3
ECHDC1-201ENST00000368287 GPER1Q99527 375 aa0.66□□□□□ -2.3
ECHDC1-201ENST00000368287 PRNDQ9UKY0 176 aa0.66□□□□□ -2.3
ECHDC1-201ENST00000368287 ZNF469Q96JG9 3925 aaPredicted RBP0.66□□□□□ -2.3
ECHDC1-201ENST00000368287 CNTRLQ7Z7A1 2325 aa0.66□□□□□ -2.3
ECHDC1-201ENST00000368287 PEAK1Q9H792 1746 aa0.66□□□□□ -2.3
ECHDC1-201ENST00000368287 COL1A1P02452 1464 aaPredicted RBP0.66□□□□□ -2.3
ECHDC1-201ENST00000368287 SIP14410 1827 aa0.66□□□□□ -2.3
ECHDC1-201ENST00000368287 MGAMO43451 1857 aa0.65□□□□□ -2.3
ECHDC1-201ENST00000368287 TLCD2A6NGC4 264 aa0.65□□□□□ -2.31
ECHDC1-201ENST00000368287 IGLV1-51P01701 117 aa0.65□□□□□ -2.31
ECHDC1-201ENST00000368287 CRHP06850 196 aa0.65□□□□□ -2.31
ECHDC1-201ENST00000368287 DYNLT3P51808 116 aa0.65□□□□□ -2.31
ECHDC1-201ENST00000368287 TMED2Q15363 201 aa0.65□□□□□ -2.31
ECHDC1-201ENST00000368287 C1orf134Q5TEV5 83 aa0.65□□□□□ -2.31
ECHDC1-201ENST00000368287 PATE2Q6UY27 113 aa0.65□□□□□ -2.31
ECHDC1-201ENST00000368287 Q8N6K4 173 aa0.65□□□□□ -2.31
ECHDC1-201ENST00000368287 C4orf3Q8WVX3 66 aa0.65□□□□□ -2.31
ECHDC1-201ENST00000368287 AMELYQ99218 206 aa0.65□□□□□ -2.31
ECHDC1-201ENST00000368287 NPCDR1Q9BY65 106 aa0.65□□□□□ -2.31
ECHDC1-201ENST00000368287 SS18L2Q9UHA2 77 aa0.65□□□□□ -2.31
ECHDC1-201ENST00000368287 ARL5AQ9Y689 179 aa0.65□□□□□ -2.31
ECHDC1-201ENST00000368287 CEP164Q9UPV0 1460 aa0.65□□□□□ -2.31
ECHDC1-201ENST00000368287 PHRF1Q9P1Y6 1649 aaKnown RBP0.64□□□□□ -2.31
ECHDC1-201ENST00000368287 CITO14578 2027 aa0.64□□□□□ -2.31
ECHDC1-201ENST00000368287 CXCL1P09341 107 aa0.64□□□□□ -2.31
ECHDC1-201ENST00000368287 NFYBP25208 207 aa0.64□□□□□ -2.31
ECHDC1-201ENST00000368287 FAM74A1Q5RGS3 127 aa0.64□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms