RNA–Protein interactions for RNA: ENST00000368069.7

COPA-202, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene COPA, Length 4,664 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-202ENST00000368069 SYT8Q8NBV8 401 aa9.5□□□□□ -0.89
COPA-202ENST00000368069 FOXC2Q99958 501 aa9.5□□□□□ -0.89
COPA-202ENST00000368069 PLP1P60201 277 aa9.49□□□□□ -0.89
COPA-202ENST00000368069 NUTF2P61970 127 aaKnown RBP9.49□□□□□ -0.89
COPA-202ENST00000368069 FREM1Q5H8C1 2179 aa9.49□□□□□ -0.89
COPA-202ENST00000368069 USF3Q68DE3 2245 aa9.49□□□□□ -0.89
COPA-202ENST00000368069 A0A1W2PPI3 338 aa9.49□□□□□ -0.89
COPA-202ENST00000368069 SH2D7A6NKC9 451 aaPredicted RBP9.49□□□□□ -0.89
COPA-202ENST00000368069 IGLV1-44P01699 117 aa9.49□□□□□ -0.89
COPA-202ENST00000368069 RHOGP84095 191 aa9.49□□□□□ -0.89
COPA-202ENST00000368069 FAM74A4Q5TZK3 123 aa9.49□□□□□ -0.89
COPA-202ENST00000368069 TTC28Q96AY4 2481 aa9.49□□□□□ -0.89
COPA-202ENST00000368069 GATA4P43694 442 aa9.49□□□□□ -0.89
COPA-202ENST00000368069 DENND4AQ7Z401 1863 aa9.49□□□□□ -0.89
COPA-202ENST00000368069 TMEM238LA0A1B0GVL6 79 aa9.49□□□□□ -0.89
COPA-202ENST00000368069 A6NJY4 79 aa9.49□□□□□ -0.89
COPA-202ENST00000368069 H3BVH4 76 aa9.49□□□□□ -0.89
COPA-202ENST00000368069 TYMSP04818 313 aa9.49□□□□□ -0.89
COPA-202ENST00000368069 TPTE2P1Q5T6R2 138 aa9.49□□□□□ -0.89
COPA-202ENST00000368069 PCNX2A6NKB5 2137 aa9.48□□□□□ -0.89
COPA-202ENST00000368069 BUB1B-PAK6H3BSN5 160 aa9.48□□□□□ -0.89
COPA-202ENST00000368069 IGKV3-20P01619 116 aa9.48□□□□□ -0.89
COPA-202ENST00000368069 PPIFP30405 207 aaKnown RBP9.48□□□□□ -0.89
COPA-202ENST00000368069 GTF3C1Q12789 2109 aa9.48□□□□□ -0.89
COPA-202ENST00000368069 C2orf88Q9BSF0 95 aa9.48□□□□□ -0.89
COPA-202ENST00000368069 ABCA4P78363 2273 aa9.48□□□□□ -0.89
COPA-202ENST00000368069 TMEM131Q92545 1883 aa9.48□□□□□ -0.89
COPA-202ENST00000368069 LOC107984156A0A0G2JMH3 177 aa9.48□□□□□ -0.89
COPA-202ENST00000368069 ARL17AQ8IVW1 177 aa9.48□□□□□ -0.89
COPA-202ENST00000368069 IGKV2-40A0A087WW87 121 aaPredicted RBP9.48□□□□□ -0.89
COPA-202ENST00000368069 IGKV2D-40P01614 121 aaPredicted RBP9.48□□□□□ -0.89
COPA-202ENST00000368069 ASIPP42127 132 aa9.48□□□□□ -0.89
COPA-202ENST00000368069 PLA2G2CQ5R387 149 aa9.48□□□□□ -0.89
COPA-202ENST00000368069 FAM71F2Q6NXP2 309 aa9.48□□□□□ -0.89
COPA-202ENST00000368069 FAM159AQ6UWV7 190 aa9.48□□□□□ -0.89
COPA-202ENST00000368069 C11orf53Q8IXP5 236 aa9.48□□□□□ -0.89
COPA-202ENST00000368069 A8MWP6 167 aa9.47□□□□□ -0.89
COPA-202ENST00000368069 OR11H12B2RN74 326 aa9.47□□□□□ -0.89
COPA-202ENST00000368069 IGHV3-11P01762 117 aa9.47□□□□□ -0.89
COPA-202ENST00000368069 OR11H1Q8NG94 326 aa9.47□□□□□ -0.89
COPA-202ENST00000368069 OR11H2Q8NH07 326 aa9.47□□□□□ -0.89
COPA-202ENST00000368069 CCL19Q99731 98 aa9.47□□□□□ -0.89
COPA-202ENST00000368069 RAXQ9Y2V3 346 aa9.47□□□□□ -0.89
COPA-202ENST00000368069 KLF2Q9Y5W3 355 aaPredicted RBP9.47□□□□□ -0.89
COPA-202ENST00000368069 EREGO14944 169 aa9.47□□□□□ -0.89
COPA-202ENST00000368069 MMP23AO75900 390 aa9.47□□□□□ -0.89
COPA-202ENST00000368069 ATP5LO75964 103 aa9.47□□□□□ -0.89
COPA-202ENST00000368069 HBDP02042 147 aa9.47□□□□□ -0.89
COPA-202ENST00000368069 LEPP41159 167 aa9.47□□□□□ -0.89
COPA-202ENST00000368069 SLC50A1Q9BRV3 221 aa9.47□□□□□ -0.89
COPA-202ENST00000368069 NDUFA4L2Q9NRX3 87 aa9.47□□□□□ -0.89
COPA-202ENST00000368069 POLR3KQ9Y2Y1 108 aaPredicted RBP9.47□□□□□ -0.89
COPA-202ENST00000368069 NPIPB5A8MRT5 1133 aa9.47□□□□□ -0.89
COPA-202ENST00000368069 RPL15P61313 204 aaKnown RBP9.47□□□□□ -0.89
COPA-202ENST00000368069 SMIM13P0DJ93 91 aa9.47□□□□□ -0.89
COPA-202ENST00000368069 ASCL2Q99929 193 aa9.47□□□□□ -0.89
COPA-202ENST00000368069 NCOR1P1Q9H4R4 102 aa9.47□□□□□ -0.89
COPA-202ENST00000368069 GGTLC3B5MD39 225 aa9.46□□□□□ -0.89
COPA-202ENST00000368069 PCP4P48539 62 aa9.46□□□□□ -0.89
COPA-202ENST00000368069 CACNG7P62955 275 aa9.46□□□□□ -0.89
COPA-202ENST00000368069 ZNF56Q15929 161 aa9.46□□□□□ -0.89
COPA-202ENST00000368069 Q8TCH9 128 aa9.46□□□□□ -0.89
COPA-202ENST00000368069 RNF5Q99942 180 aa9.46□□□□□ -0.89
COPA-202ENST00000368069 MRPL27Q9P0M9 148 aaKnown RBP9.46□□□□□ -0.89
COPA-202ENST00000368069 MUC22E2RYF6 1773 aaPredicted RBP9.46□□□□□ -0.89
COPA-202ENST00000368069 COL8A2P25067 703 aa9.46□□□□□ -0.89
COPA-202ENST00000368069 Q0VG73 95 aa9.46□□□□□ -0.89
COPA-202ENST00000368069 KIR2DL4Q99706 377 aa9.46□□□□□ -0.89
COPA-202ENST00000368069 E7EQL1 145 aa9.46□□□□□ -0.9
COPA-202ENST00000368069 LY6HO94772 140 aa9.46□□□□□ -0.9
COPA-202ENST00000368069 CFHR2P36980 270 aa9.46□□□□□ -0.9
COPA-202ENST00000368069 ZNF833PQ6ZTB9 187 aa9.46□□□□□ -0.9
COPA-202ENST00000368069 ST20Q9HBF5 79 aa9.46□□□□□ -0.9
COPA-202ENST00000368069 TOMM40O96008 361 aa9.45□□□□□ -0.9
COPA-202ENST00000368069 ZNF124Q15973 351 aa9.45□□□□□ -0.9
COPA-202ENST00000368069 H7C2G1 150 aa9.45□□□□□ -0.9
COPA-202ENST00000368069 C5orf64Q2M2E5 130 aa9.45□□□□□ -0.9
COPA-202ENST00000368069 SCGB3A1Q96QR1 104 aa9.45□□□□□ -0.9
COPA-202ENST00000368069 TMEM155Q4W5P6 130 aa9.45□□□□□ -0.9
COPA-202ENST00000368069 VMO1Q7Z5L0 202 aa9.45□□□□□ -0.9
COPA-202ENST00000368069 CENPVQ7Z7K6 275 aaPredicted RBP9.45□□□□□ -0.9
COPA-202ENST00000368069 SLC25A2Q9BXI2 301 aa9.45□□□□□ -0.9
COPA-202ENST00000368069 V9GYV3 84 aa9.45□□□□□ -0.9
COPA-202ENST00000368069 D6R8Y8 96 aa9.44□□□□□ -0.9
COPA-202ENST00000368069 EVI2AP22794 236 aa9.44□□□□□ -0.9
COPA-202ENST00000368069 CNTFRP26992 372 aa9.44□□□□□ -0.9
COPA-202ENST00000368069 TSPOP30536 169 aa9.44□□□□□ -0.9
COPA-202ENST00000368069 ZNF138P52744 262 aa9.44□□□□□ -0.9
COPA-202ENST00000368069 LYZL1Q6UWQ5 148 aa9.44□□□□□ -0.9
COPA-202ENST00000368069 Q86TA4 180 aa9.44□□□□□ -0.9
COPA-202ENST00000368069 FAM168AQ92567 244 aa9.44□□□□□ -0.9
COPA-202ENST00000368069 MED13LQ71F56 2210 aa9.44□□□□□ -0.9
COPA-202ENST00000368069 IGLV3-9A0A075B6K5 115 aa9.44□□□□□ -0.9
COPA-202ENST00000368069 NCR2O95944 276 aa9.44□□□□□ -0.9
COPA-202ENST00000368069 YPEL3P61236 119 aaPredicted RBP9.44□□□□□ -0.9
COPA-202ENST00000368069 SNRPD3P62318 126 aaKnown RBP9.44□□□□□ -0.9
COPA-202ENST00000368069 C15orf32Q32M92 178 aa9.44□□□□□ -0.9
COPA-202ENST00000368069 LURAP1LQ8IV03 231 aa9.44□□□□□ -0.9
COPA-202ENST00000368069 FAM215AQ9Y5M1 114 aa9.44□□□□□ -0.9
COPA-202ENST00000368069 RNASE4P34096 147 aaKnown RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms