RNA–Protein interactions for RNA: ENST00000367251.7

SYNE1-205, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 1 (best)

Gene SYNE1, Length 5,837 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-205ENST00000367251 LINC00614P0C842 121 aa7.42□□□□□ -1.22
SYNE1-205ENST00000367251 GATA2P23769 480 aaPredicted RBP7.42□□□□□ -1.22
SYNE1-205ENST00000367251 SP5Q6BEB4 398 aaPredicted RBP7.42□□□□□ -1.22
SYNE1-205ENST00000367251 MGST2Q99735 147 aa7.42□□□□□ -1.22
SYNE1-205ENST00000367251 ST20Q9HBF5 79 aa7.42□□□□□ -1.22
SYNE1-205ENST00000367251 PSG8Q9UQ74 426 aa7.42□□□□□ -1.22
SYNE1-205ENST00000367251 MBD3L4A6NDZ8 208 aaPredicted RBP7.42□□□□□ -1.22
SYNE1-205ENST00000367251 MBD3L3A6NE82 208 aaPredicted RBP7.42□□□□□ -1.22
SYNE1-205ENST00000367251 MBD3L5A6NJ08 208 aaPredicted RBP7.42□□□□□ -1.22
SYNE1-205ENST00000367251 C10orf91Q5T1B1 145 aa7.42□□□□□ -1.22
SYNE1-205ENST00000367251 C20orf204Q6ZNR8 217 aa7.42□□□□□ -1.22
SYNE1-205ENST00000367251 SLC25A48Q6ZT89 311 aaKnown RBP7.42□□□□□ -1.22
SYNE1-205ENST00000367251 CD177Q8N6Q3 437 aa7.42□□□□□ -1.22
SYNE1-205ENST00000367251 KLHL30-AS1Q8NEE0 82 aa7.42□□□□□ -1.22
SYNE1-205ENST00000367251 MBD3L2Q8NHZ7 208 aaPredicted RBP7.42□□□□□ -1.22
SYNE1-205ENST00000367251 WFDC12Q8WWY7 111 aa7.42□□□□□ -1.22
SYNE1-205ENST00000367251 SCGB3A1Q96QR1 104 aa7.42□□□□□ -1.22
SYNE1-205ENST00000367251 SMPXQ9UHP9 88 aa7.42□□□□□ -1.22
SYNE1-205ENST00000367251 HBDP02042 147 aa7.41□□□□□ -1.22
SYNE1-205ENST00000367251 MST1LQ2TV78 715 aa7.41□□□□□ -1.22
SYNE1-205ENST00000367251 MESP1Q9BRJ9 268 aa7.41□□□□□ -1.22
SYNE1-205ENST00000367251 MBNL3Q9NUK0 354 aaKnown RBP7.41□□□□□ -1.22
SYNE1-205ENST00000367251 AMBPP02760 352 aa7.41□□□□□ -1.22
SYNE1-205ENST00000367251 DEFB130BP0DP73 79 aa7.41□□□□□ -1.22
SYNE1-205ENST00000367251 DEFB130AP0DP74 79 aa7.41□□□□□ -1.22
SYNE1-205ENST00000367251 PRB3Q04118 309 aaPredicted RBP7.41□□□□□ -1.22
SYNE1-205ENST00000367251 LYPD1Q8N2G4 141 aa7.41□□□□□ -1.22
SYNE1-205ENST00000367251 TMEM126AQ9H061 195 aa7.41□□□□□ -1.22
SYNE1-205ENST00000367251 IFI27P40305 119 aaPredicted RBP7.41□□□□□ -1.22
SYNE1-205ENST00000367251 SLC25A2Q9BXI2 301 aa7.41□□□□□ -1.22
SYNE1-205ENST00000367251 MRPL27Q9P0M9 148 aaKnown RBP7.41□□□□□ -1.22
SYNE1-205ENST00000367251 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.41□□□□□ -1.22
SYNE1-205ENST00000367251 CD24P25063 80 aa7.41□□□□□ -1.22
SYNE1-205ENST00000367251 LMO1P25800 156 aa7.41□□□□□ -1.22
SYNE1-205ENST00000367251 LCNL1Q6ZST4 164 aa7.41□□□□□ -1.22
SYNE1-205ENST00000367251 MUC21A0A0G2JKD1 596 aa7.4□□□□□ -1.22
SYNE1-205ENST00000367251 MUC21A0A140T8X8 626 aa7.4□□□□□ -1.22
SYNE1-205ENST00000367251 C5orf63A6NC05 138 aa7.4□□□□□ -1.22
SYNE1-205ENST00000367251 IGHV3-53P01767 116 aa7.4□□□□□ -1.22
SYNE1-205ENST00000367251 ANXA2RQ3ZCQ2 193 aa7.4□□□□□ -1.22
SYNE1-205ENST00000367251 DMRTA1Q5VZB9 504 aa7.4□□□□□ -1.22
SYNE1-205ENST00000367251 C1QTNF4Q9BXJ3 329 aa7.4□□□□□ -1.22
SYNE1-205ENST00000367251 TRGV1A0A0A0MS02 117 aa7.4□□□□□ -1.22
SYNE1-205ENST00000367251 FOXG1P55316 489 aaPredicted RBP7.4□□□□□ -1.22
SYNE1-205ENST00000367251 C1orf194Q5T5A4 169 aa7.4□□□□□ -1.22
SYNE1-205ENST00000367251 MINOS1Q5TGZ0 78 aa7.4□□□□□ -1.22
SYNE1-205ENST00000367251 DTX1Q86Y01 620 aa7.4□□□□□ -1.22
SYNE1-205ENST00000367251 C1orf147Q96MC9 270 aaPredicted RBP7.4□□□□□ -1.22
SYNE1-205ENST00000367251 C18orf15Q96N68 181 aa7.4□□□□□ -1.22
SYNE1-205ENST00000367251 SELENOKQ9Y6D0 94 aa7.4□□□□□ -1.22
SYNE1-205ENST00000367251 MINOS1-NBL1R4GNA1 71 aa7.4□□□□□ -1.22
SYNE1-205ENST00000367251 ADCYAP1P18509 176 aa7.4□□□□□ -1.22
SYNE1-205ENST00000367251 HOXD3P31249 432 aaPredicted RBP7.4□□□□□ -1.22
SYNE1-205ENST00000367251 C14orf144Q96I85 54 aa7.4□□□□□ -1.22
SYNE1-205ENST00000367251 TRGV11A0A075B6L2 103 aa7.4□□□□□ -1.23
SYNE1-205ENST00000367251 LYNX1G3V0Z9 82 aa7.4□□□□□ -1.23
SYNE1-205ENST00000367251 LYNX1P0DP58 116 aa7.4□□□□□ -1.23
SYNE1-205ENST00000367251 GNG5P63218 68 aa7.4□□□□□ -1.23
SYNE1-205ENST00000367251 NIT1Q86X76 327 aa7.4□□□□□ -1.23
SYNE1-205ENST00000367251 TMEM178BH3BS89 294 aa7.4□□□□□ -1.23
SYNE1-205ENST00000367251 PYYP10082 97 aa7.4□□□□□ -1.23
SYNE1-205ENST00000367251 SRSF1Q07955 248 aaKnown RBP eCLIP7.4□□□□□ -1.23
SYNE1-205ENST00000367251 C5orf30Q96GV9 206 aa7.4□□□□□ -1.23
SYNE1-205ENST00000367251 RSPO3Q9BXY4 272 aaPredicted RBP7.4□□□□□ -1.23
SYNE1-205ENST00000367251 F5H768 121 aa7.39□□□□□ -1.23
SYNE1-205ENST00000367251 OVOL1O14753 267 aa7.39□□□□□ -1.23
SYNE1-205ENST00000367251 IGHV1-8P0DP01 117 aa7.39□□□□□ -1.23
SYNE1-205ENST00000367251 ORMDL2Q53FV1 153 aa7.39□□□□□ -1.23
SYNE1-205ENST00000367251 SPSB3Q6PJ21 355 aa7.39□□□□□ -1.23
SYNE1-205ENST00000367251 COQ2Q96H96 371 aa7.39□□□□□ -1.23
SYNE1-205ENST00000367251 C15orf62A8K5M9 175 aa7.39□□□□□ -1.23
SYNE1-205ENST00000367251 RNF144BQ7Z419 303 aa7.39□□□□□ -1.23
SYNE1-205ENST00000367251 FAM19A2Q8N3H0 131 aa7.39□□□□□ -1.23
SYNE1-205ENST00000367251 GAFA1Q96PS6 74 aa7.39□□□□□ -1.23
SYNE1-205ENST00000367251 ARFGEF3Q5TH69 2177 aa7.39□□□□□ -1.23
SYNE1-205ENST00000367251 IGHV2-26A0A0B4J1V2 119 aa7.39□□□□□ -1.23
SYNE1-205ENST00000367251 H0YJW9 148 aa7.39□□□□□ -1.23
SYNE1-205ENST00000367251 M0R1W7 72 aa7.39□□□□□ -1.23
SYNE1-205ENST00000367251 RHOGP84095 191 aa7.39□□□□□ -1.23
SYNE1-205ENST00000367251 FAM90A2PQ658T7 463 aa7.39□□□□□ -1.23
SYNE1-205ENST00000367251 A0A1B0GWJ7 208 aa7.39□□□□□ -1.23
SYNE1-205ENST00000367251 EFNA4P52798 201 aa7.39□□□□□ -1.23
SYNE1-205ENST00000367251 TMEM200BQ69YZ2 307 aa7.39□□□□□ -1.23
SYNE1-205ENST00000367251 GFRA4Q9GZZ7 299 aa7.39□□□□□ -1.23
SYNE1-205ENST00000367251 GGTLC3B5MD39 225 aa7.39□□□□□ -1.23
SYNE1-205ENST00000367251 RNF223E7ERA6 249 aa7.39□□□□□ -1.23
SYNE1-205ENST00000367251 IGLV3-1P01715 115 aa7.39□□□□□ -1.23
SYNE1-205ENST00000367251 SEC11AP67812 179 aa7.39□□□□□ -1.23
SYNE1-205ENST00000367251 FBLN7Q53RD9 439 aa7.39□□□□□ -1.23
SYNE1-205ENST00000367251 UBE2E2Q96LR5 201 aa7.39□□□□□ -1.23
SYNE1-205ENST00000367251 LAMTOR3Q9UHA4 124 aa7.39□□□□□ -1.23
SYNE1-205ENST00000367251 MRPL16Q9NX20 251 aaKnown RBP7.38□□□□□ -1.23
SYNE1-205ENST00000367251 PAX4O43316 350 aa7.38□□□□□ -1.23
SYNE1-205ENST00000367251 HGFACQ04756 655 aa7.38□□□□□ -1.23
SYNE1-205ENST00000367251 OR5A1Q8NGJ0 315 aa7.38□□□□□ -1.23
SYNE1-205ENST00000367251 LINC00473A8K010 186 aa7.38□□□□□ -1.23
SYNE1-205ENST00000367251 SLC25A39Q9BZJ4 359 aaPredicted RBP7.38□□□□□ -1.23
SYNE1-205ENST00000367251 HEATR5BQ9P2D3 2071 aa7.38□□□□□ -1.23
SYNE1-205ENST00000367251 TMEM8BA6NDV4 472 aa7.37□□□□□ -1.23
SYNE1-205ENST00000367251 PGPEP1LA6NFU8 196 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms