RNA–Protein interactions for RNA: ENST00000366862.9

FBXO28-201, Transcript of F-box protein 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FBXO28, Length 5,451 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28-201ENST00000366862 FXYD7P58549 80 aa12.89□□□□□ -0.35
FBXO28-201ENST00000366862 MCRIP2Q9BUT9 160 aaKnown RBP12.89□□□□□ -0.35
FBXO28-201ENST00000366862 SCRT1Q9BWW7 348 aa12.89□□□□□ -0.35
FBXO28-201ENST00000366862 CLPSP04118 112 aa12.88□□□□□ -0.35
FBXO28-201ENST00000366862 ZNF726P1Q15940 193 aa12.88□□□□□ -0.35
FBXO28-201ENST00000366862 LY6EQ16553 131 aa12.88□□□□□ -0.35
FBXO28-201ENST00000366862 IGKV2-40A0A087WW87 121 aaPredicted RBP12.88□□□□□ -0.35
FBXO28-201ENST00000366862 PSPNO60542 156 aa12.88□□□□□ -0.35
FBXO28-201ENST00000366862 IGKV2D-40P01614 121 aaPredicted RBP12.88□□□□□ -0.35
FBXO28-201ENST00000366862 PRR31Q5SQ13 230 aa12.88□□□□□ -0.35
FBXO28-201ENST00000366862 Q86TA4 180 aa12.88□□□□□ -0.35
FBXO28-201ENST00000366862 LINC00473A8K010 186 aa12.88□□□□□ -0.35
FBXO28-201ENST00000366862 SRRM5B3KS81 715 aa12.88□□□□□ -0.35
FBXO28-201ENST00000366862 TFF1P04155 84 aa12.88□□□□□ -0.35
FBXO28-201ENST00000366862 SLC25A20O43772 301 aa12.88□□□□□ -0.35
FBXO28-201ENST00000366862 PAX9P55771 341 aa12.88□□□□□ -0.35
FBXO28-201ENST00000366862 OVOL2Q9BRP0 275 aa12.88□□□□□ -0.35
FBXO28-201ENST00000366862 CACNA1IQ9P0X4 2223 aa12.87□□□□□ -0.35
FBXO28-201ENST00000366862 SPAARA0A1B0GVQ0 90 aa12.87□□□□□ -0.35
FBXO28-201ENST00000366862 C5orf63A6NC05 138 aa12.87□□□□□ -0.35
FBXO28-201ENST00000366862 EDA2RQ9HAV5 297 aa12.87□□□□□ -0.35
FBXO28-201ENST00000366862 KIF26BQ2KJY2 2108 aa12.87□□□□□ -0.35
FBXO28-201ENST00000366862 GAGE12HA6NDE8 117 aa12.87□□□□□ -0.35
FBXO28-201ENST00000366862 FOXL2NBQ6ZUU3 175 aa12.87□□□□□ -0.35
FBXO28-201ENST00000366862 PIMREGQ9BSJ6 248 aa12.87□□□□□ -0.35
FBXO28-201ENST00000366862 MBNL3Q9NUK0 354 aaKnown RBP12.87□□□□□ -0.35
FBXO28-201ENST00000366862 LCTP09848 1927 aa12.87□□□□□ -0.35
FBXO28-201ENST00000366862 A0A1W2PPM0 123 aa12.87□□□□□ -0.35
FBXO28-201ENST00000366862 FAM231DQ6ZW35 169 aa12.87□□□□□ -0.35
FBXO28-201ENST00000366862 V9GYV3 84 aa12.87□□□□□ -0.35
FBXO28-201ENST00000366862 C9JAW5 83 aa12.87□□□□□ -0.35
FBXO28-201ENST00000366862 COA6Q5JTJ3 125 aaKnown RBP12.87□□□□□ -0.35
FBXO28-201ENST00000366862 DPH3P1Q9H4G8 78 aa12.87□□□□□ -0.35
FBXO28-201ENST00000366862 SCN10AQ9Y5Y9 1956 aa12.87□□□□□ -0.35
FBXO28-201ENST00000366862 BVES-AS1Q5T3Y7 98 aa12.86□□□□□ -0.35
FBXO28-201ENST00000366862 VOPP1Q96AW1 172 aa12.86□□□□□ -0.35
FBXO28-201ENST00000366862 SLAQ13239 276 aa12.86□□□□□ -0.35
FBXO28-201ENST00000366862 AMN1Q8IY45 258 aa12.86□□□□□ -0.35
FBXO28-201ENST00000366862 SMIM27A0A1W2PRY6 76 aa12.86□□□□□ -0.35
FBXO28-201ENST00000366862 DUSP14O95147 198 aaKnown RBP12.86□□□□□ -0.35
FBXO28-201ENST00000366862 CFAP161Q6P656 301 aa12.86□□□□□ -0.35
FBXO28-201ENST00000366862 BRCA1P38398 1863 aaKnown RBP12.86□□□□□ -0.35
FBXO28-201ENST00000366862 TRGV11A0A075B6L2 103 aa12.85□□□□□ -0.35
FBXO28-201ENST00000366862 SELLP14151 372 aa12.85□□□□□ -0.35
FBXO28-201ENST00000366862 LGALS9BQ3B8N2 356 aa12.85□□□□□ -0.35
FBXO28-201ENST00000366862 LGALS9CQ6DKI2 356 aa12.85□□□□□ -0.35
FBXO28-201ENST00000366862 ZNF581Q9P0T4 197 aa12.85□□□□□ -0.35
FBXO28-201ENST00000366862 IGHV1-24A0A0C4DH33 117 aa12.85□□□□□ -0.35
FBXO28-201ENST00000366862 SIVA1O15304 175 aa12.85□□□□□ -0.35
FBXO28-201ENST00000366862 C9orf153Q5TBE3 101 aa12.85□□□□□ -0.35
FBXO28-201ENST00000366862 VCYO14598 125 aa12.85□□□□□ -0.35
FBXO28-201ENST00000366862 FAM27E3Q08E93 113 aa12.85□□□□□ -0.35
FBXO28-201ENST00000366862 IGHV3-64A0A075B6Q5 118 aa12.85□□□□□ -0.35
FBXO28-201ENST00000366862 VDAC2P45880 294 aaPredicted RBP12.85□□□□□ -0.35
FBXO28-201ENST00000366862 IGKV3D-20A0A0C4DH25 116 aa12.84□□□□□ -0.35
FBXO28-201ENST00000366862 C5orf24Q7Z6I8 188 aa12.84□□□□□ -0.35
FBXO28-201ENST00000366862 NEU4Q8WWR8 484 aaPredicted RBP12.84□□□□□ -0.35
FBXO28-201ENST00000366862 RNF5Q99942 180 aa12.84□□□□□ -0.35
FBXO28-201ENST00000366862 LSM4Q9Y4Z0 139 aaKnown RBP12.84□□□□□ -0.35
FBXO28-201ENST00000366862 C9orf172C9J069 976 aa12.84□□□□□ -0.35
FBXO28-201ENST00000366862 GREB1Q4ZG55 1949 aa12.84□□□□□ -0.35
FBXO28-201ENST00000366862 RNASE2P10153 161 aaKnown RBP12.84□□□□□ -0.35
FBXO28-201ENST00000366862 ETDBQ3ZM63 59 aa12.84□□□□□ -0.35
FBXO28-201ENST00000366862 C10orf55Q5SWW7 151 aa12.84□□□□□ -0.35
FBXO28-201ENST00000366862 GGNQ86UU5 652 aa12.84□□□□□ -0.35
FBXO28-201ENST00000366862 VWCEQ96DN2 955 aa12.84□□□□□ -0.35
FBXO28-201ENST00000366862 IGLC7A0M8Q6 106 aa12.83□□□□□ -0.35
FBXO28-201ENST00000366862 AZU1P20160 251 aa12.83□□□□□ -0.35
FBXO28-201ENST00000366862 CDPF1Q6NVV7 123 aa12.83□□□□□ -0.35
FBXO28-201ENST00000366862 TRAV40A0A0B4J280 105 aa12.83□□□□□ -0.36
FBXO28-201ENST00000366862 IL15RAQ13261 267 aa12.83□□□□□ -0.36
FBXO28-201ENST00000366862 TAL2Q16559 108 aa12.83□□□□□ -0.36
FBXO28-201ENST00000366862 LHFPL4Q7Z7J7 247 aa12.83□□□□□ -0.36
FBXO28-201ENST00000366862 LINC01587Q99440 93 aa12.83□□□□□ -0.36
FBXO28-201ENST00000366862 ARMS2P0C7Q2 107 aa12.83□□□□□ -0.36
FBXO28-201ENST00000366862 BSPH1Q075Z2 132 aa12.83□□□□□ -0.36
FBXO28-201ENST00000366862 ATP1A1-AS1Q5TC04 95 aa12.83□□□□□ -0.36
FBXO28-201ENST00000366862 SP9P0CG40 484 aa12.83□□□□□ -0.36
FBXO28-201ENST00000366862 PDLIM4P50479 330 aa12.83□□□□□ -0.36
FBXO28-201ENST00000366862 HIST1H4AP62805 103 aaKnown RBP12.83□□□□□ -0.36
FBXO28-201ENST00000366862 SIGLEC15Q6ZMC9 328 aa12.83□□□□□ -0.36
FBXO28-201ENST00000366862 TMEM8BA6NDV4 472 aa12.82□□□□□ -0.36
FBXO28-201ENST00000366862 H3BMM0 161 aa12.82□□□□□ -0.36
FBXO28-201ENST00000366862 UBE2WQ96B02 151 aa12.82□□□□□ -0.36
FBXO28-201ENST00000366862 CYYR1Q96J86 154 aa12.82□□□□□ -0.36
FBXO28-201ENST00000366862 C1orf147Q96MC9 270 aaPredicted RBP12.82□□□□□ -0.36
FBXO28-201ENST00000366862 CD177Q8N6Q3 437 aa12.82□□□□□ -0.36
FBXO28-201ENST00000366862 C9orf106Q8NAJ2 232 aa12.82□□□□□ -0.36
FBXO28-201ENST00000366862 KLHDC3Q9BQ90 382 aa12.82□□□□□ -0.36
FBXO28-201ENST00000366862 MAP1BP46821 2468 aaKnown RBP12.82□□□□□ -0.36
FBXO28-201ENST00000366862 TMEM86BQ8N661 226 aa12.82□□□□□ -0.36
FBXO28-201ENST00000366862 MYOFQ9NZM1 2061 aa12.82□□□□□ -0.36
FBXO28-201ENST00000366862 FREM3P0C091 2139 aa12.82□□□□□ -0.36
FBXO28-201ENST00000366862 IGHV1-18A0A0C4DH31 117 aa12.82□□□□□ -0.36
FBXO28-201ENST00000366862 MYOD1P15172 320 aa12.82□□□□□ -0.36
FBXO28-201ENST00000366862 TMEM75Q8N9X5 138 aa12.82□□□□□ -0.36
FBXO28-201ENST00000366862 LINC00479Q96M42 142 aa12.82□□□□□ -0.36
FBXO28-201ENST00000366862 CITED1Q99966 193 aa12.82□□□□□ -0.36
FBXO28-201ENST00000366862 C1orf122Q6ZSJ8 110 aa12.82□□□□□ -0.36
FBXO28-201ENST00000366862 NEGR1Q7Z3B1 354 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms