RNA–Protein interactions for RNA: ENST00000361332.8

CTNND1-202, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-202ENST00000361332 C15orf61A6NNL5 157 aa6.91□□□□□ -1.3
CTNND1-202ENST00000361332 FOXS1O43638 330 aa6.91□□□□□ -1.3
CTNND1-202ENST00000361332 EFNA4P52798 201 aa6.91□□□□□ -1.3
CTNND1-202ENST00000361332 PAX9P55771 341 aa6.91□□□□□ -1.3
CTNND1-202ENST00000361332 RPL18AQ02543 176 aaKnown RBP6.91□□□□□ -1.3
CTNND1-202ENST00000361332 PVRIGQ6DKI7 326 aa6.91□□□□□ -1.3
CTNND1-202ENST00000361332 SLC25A45Q8N413 288 aa6.91□□□□□ -1.3
CTNND1-202ENST00000361332 SCRT2Q9NQ03 307 aa6.91□□□□□ -1.3
CTNND1-202ENST00000361332 A0A1W2PPI3 338 aa6.9□□□□□ -1.3
CTNND1-202ENST00000361332 SMPXQ9UHP9 88 aa6.9□□□□□ -1.3
CTNND1-202ENST00000361332 TRAV12-1A0A0B4J245 112 aa6.9□□□□□ -1.3
CTNND1-202ENST00000361332 CELA3AP09093 270 aa6.9□□□□□ -1.3
CTNND1-202ENST00000361332 MRPL14Q6P1L8 145 aaKnown RBP6.9□□□□□ -1.3
CTNND1-202ENST00000361332 ZNFX1Q9P2E3 1918 aaKnown RBP6.9□□□□□ -1.3
CTNND1-202ENST00000361332 PAPPA2Q9BXP8 1791 aa6.9□□□□□ -1.3
CTNND1-202ENST00000361332 MYMXA0A1B0GTQ4 84 aa6.9□□□□□ -1.3
CTNND1-202ENST00000361332 LINC00312Q9Y6C7 94 aa6.9□□□□□ -1.3
CTNND1-202ENST00000361332 H0YIZ8 118 aa6.9□□□□□ -1.31
CTNND1-202ENST00000361332 GREM1O60565 184 aa6.9□□□□□ -1.31
CTNND1-202ENST00000361332 C3orf79P0CE67 100 aa6.9□□□□□ -1.31
CTNND1-202ENST00000361332 RPL15P61313 204 aaKnown RBP6.9□□□□□ -1.31
CTNND1-202ENST00000361332 GPHB5Q86YW7 130 aa6.9□□□□□ -1.31
CTNND1-202ENST00000361332 TMEM133Q9H2Q1 129 aa6.9□□□□□ -1.31
CTNND1-202ENST00000361332 IGHV3-16A0A0C4DH30 117 aa6.9□□□□□ -1.31
CTNND1-202ENST00000361332 C17orf98A8MV24 154 aa6.9□□□□□ -1.31
CTNND1-202ENST00000361332 A8MWP6 167 aa6.9□□□□□ -1.31
CTNND1-202ENST00000361332 PPBPP02775 128 aa6.9□□□□□ -1.31
CTNND1-202ENST00000361332 EGR2P11161 476 aaPredicted RBP6.9□□□□□ -1.31
CTNND1-202ENST00000361332 GAS1P54826 345 aa6.9□□□□□ -1.31
CTNND1-202ENST00000361332 KLRD1Q13241 179 aa6.9□□□□□ -1.31
CTNND1-202ENST00000361332 C8orf31Q8N9H6 132 aa6.9□□□□□ -1.31
CTNND1-202ENST00000361332 SLC25A39Q9BZJ4 359 aaPredicted RBP6.9□□□□□ -1.31
CTNND1-202ENST00000361332 ZNF646O15015 1829 aaPredicted RBP6.9□□□□□ -1.31
CTNND1-202ENST00000361332 PSG7Q13046 419 aa6.89□□□□□ -1.31
CTNND1-202ENST00000361332 SOCS3O14543 225 aa6.89□□□□□ -1.31
CTNND1-202ENST00000361332 VCYO14598 125 aa6.89□□□□□ -1.31
CTNND1-202ENST00000361332 MLNRO43193 412 aa6.89□□□□□ -1.31
CTNND1-202ENST00000361332 TSKUQ8WUA8 353 aa6.89□□□□□ -1.31
CTNND1-202ENST00000361332 ZNF503Q96F45 646 aa6.89□□□□□ -1.31
CTNND1-202ENST00000361332 SPXQ9BT56 116 aa6.89□□□□□ -1.31
CTNND1-202ENST00000361332 IGKV2-40A0A087WW87 121 aaPredicted RBP6.89□□□□□ -1.31
CTNND1-202ENST00000361332 IGKV2D-40P01614 121 aaPredicted RBP6.89□□□□□ -1.31
CTNND1-202ENST00000361332 NPSP0C0P6 89 aa6.89□□□□□ -1.31
CTNND1-202ENST00000361332 SYNJ2BPP57105 145 aa6.89□□□□□ -1.31
CTNND1-202ENST00000361332 TIRAPP58753 221 aa6.89□□□□□ -1.31
CTNND1-202ENST00000361332 C15orf32Q32M92 178 aa6.89□□□□□ -1.31
CTNND1-202ENST00000361332 C18orf12Q96KH6 178 aa6.89□□□□□ -1.31
CTNND1-202ENST00000361332 ATP6V0BQ99437 205 aa6.89□□□□□ -1.31
CTNND1-202ENST00000361332 PKIGQ9Y2B9 76 aa6.89□□□□□ -1.31
CTNND1-202ENST00000361332 TSSC4Q9Y5U2 329 aaPredicted RBP6.89□□□□□ -1.31
CTNND1-202ENST00000361332 GAGE7O76087 117 aa6.89□□□□□ -1.31
CTNND1-202ENST00000361332 IGLV2-23P01705 113 aa6.89□□□□□ -1.31
CTNND1-202ENST00000361332 GAGE12FP0CL80 117 aa6.89□□□□□ -1.31
CTNND1-202ENST00000361332 GAGE12GP0CL81 117 aa6.89□□□□□ -1.31
CTNND1-202ENST00000361332 GAGE12IP0CL82 117 aa6.89□□□□□ -1.31
CTNND1-202ENST00000361332 DEFB131AP59861 70 aa6.89□□□□□ -1.31
CTNND1-202ENST00000361332 SUPT4H1P63272 117 aaKnown RBP6.89□□□□□ -1.31
CTNND1-202ENST00000361332 LAGE3Q14657 143 aa6.89□□□□□ -1.31
CTNND1-202ENST00000361332 CLPSL2Q6UWE3 100 aa6.89□□□□□ -1.31
CTNND1-202ENST00000361332 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.89□□□□□ -1.31
CTNND1-202ENST00000361332 REG4Q9BYZ8 158 aa6.89□□□□□ -1.31
CTNND1-202ENST00000361332 DEPPQ9NTK1 212 aa6.89□□□□□ -1.31
CTNND1-202ENST00000361332 SBF2Q86WG5 1849 aa6.89□□□□□ -1.31
CTNND1-202ENST00000361332 C4orf51C9J302 202 aa6.89□□□□□ -1.31
CTNND1-202ENST00000361332 COX5BP10606 129 aa6.89□□□□□ -1.31
CTNND1-202ENST00000361332 MPZP25189 248 aa6.89□□□□□ -1.31
CTNND1-202ENST00000361332 TIMP3P35625 211 aa6.89□□□□□ -1.31
CTNND1-202ENST00000361332 WFDC1Q9HC57 220 aa6.89□□□□□ -1.31
CTNND1-202ENST00000361332 PSG8Q9UQ74 426 aa6.89□□□□□ -1.31
CTNND1-202ENST00000361332 TRBV25-1A0A075B6N4 114 aa6.88□□□□□ -1.31
CTNND1-202ENST00000361332 A0A1W2PQF6 199 aa6.88□□□□□ -1.31
CTNND1-202ENST00000361332 DSCR8Q96T75 97 aa6.88□□□□□ -1.31
CTNND1-202ENST00000361332 TM2D1Q9BX74 207 aa6.88□□□□□ -1.31
CTNND1-202ENST00000361332 KNCNA6PVL3 124 aa6.88□□□□□ -1.31
CTNND1-202ENST00000361332 UPK2O00526 184 aa6.88□□□□□ -1.31
CTNND1-202ENST00000361332 CD55P08174 381 aa6.88□□□□□ -1.31
CTNND1-202ENST00000361332 ANKRD39Q53RE8 183 aa6.88□□□□□ -1.31
CTNND1-202ENST00000361332 KLF17Q5JT82 389 aaPredicted RBP6.88□□□□□ -1.31
CTNND1-202ENST00000361332 CFHR5Q9BXR6 569 aa6.88□□□□□ -1.31
CTNND1-202ENST00000361332 A0A087WWL8 130 aa6.88□□□□□ -1.31
CTNND1-202ENST00000361332 E9PLN8 166 aa6.88□□□□□ -1.31
CTNND1-202ENST00000361332 GAGE6Q13070 117 aa6.88□□□□□ -1.31
CTNND1-202ENST00000361332 C15orf53Q8NAA6 179 aa6.88□□□□□ -1.31
CTNND1-202ENST00000361332 COL11A2P13942 1736 aaPredicted RBP6.88□□□□□ -1.31
CTNND1-202ENST00000361332 C9JAW5 83 aa6.88□□□□□ -1.31
CTNND1-202ENST00000361332 C12orf77C9JDV5 145 aa6.88□□□□□ -1.31
CTNND1-202ENST00000361332 SCRT1Q9BWW7 348 aa6.88□□□□□ -1.31
CTNND1-202ENST00000361332 IGF2BP2-AS1Q96M15 143 aa6.88□□□□□ -1.31
CTNND1-202ENST00000361332 VSIRQ9H7M9 311 aa6.88□□□□□ -1.31
CTNND1-202ENST00000361332 GREB1LQ9C091 1923 aaPredicted RBP6.88□□□□□ -1.31
CTNND1-202ENST00000361332 FAM231BA6NCW3 169 aa6.87□□□□□ -1.31
CTNND1-202ENST00000361332 LMO1P25800 156 aa6.87□□□□□ -1.31
CTNND1-202ENST00000361332 NBL1P41271 181 aa6.87□□□□□ -1.31
CTNND1-202ENST00000361332 SLC22A18ASQ8N1D0 253 aa6.87□□□□□ -1.31
CTNND1-202ENST00000361332 C9orf106Q8NAJ2 232 aa6.87□□□□□ -1.31
CTNND1-202ENST00000361332 SVIPQ8NHG7 77 aa6.87□□□□□ -1.31
CTNND1-202ENST00000361332 TIMM21Q9BVV7 248 aa6.87□□□□□ -1.31
CTNND1-202ENST00000361332 SCN3AQ9NY46 2000 aa6.87□□□□□ -1.31
CTNND1-202ENST00000361332 IGHV4-28A0A0C4DH34 117 aa6.87□□□□□ -1.31
CTNND1-202ENST00000361332 LRCOL1A6NCL2 159 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms