RNA–Protein interactions for RNA: ENST00000360299.9

RAB5B-201, Transcript of RAB5B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5B, Length 5,340 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-201ENST00000360299 RPL23P62829 140 aaKnown RBP5.71□□□□□ -1.49
RAB5B-201ENST00000360299 KRTAP27-1Q3LI81 207 aa5.71□□□□□ -1.49
RAB5B-201ENST00000360299 ZNF585BQ52M93 769 aa5.71□□□□□ -1.49
RAB5B-201ENST00000360299 KIR3DL3Q8N743 410 aa5.71□□□□□ -1.49
RAB5B-201ENST00000360299 OR10AG1Q8NH19 301 aa5.71□□□□□ -1.49
RAB5B-201ENST00000360299 IMMP2LQ96T52 175 aa5.71□□□□□ -1.49
RAB5B-201ENST00000360299 FRYQ5TBA9 3013 aa5.71□□□□□ -1.5
RAB5B-201ENST00000360299 HIVEP3Q5T1R4 2406 aa5.71□□□□□ -1.5
RAB5B-201ENST00000360299 EML5Q05BV3 1969 aa5.71□□□□□ -1.5
RAB5B-201ENST00000360299 FABP5P3A8MUU1 101 aa5.71□□□□□ -1.5
RAB5B-201ENST00000360299 H7C1H1 209 aa5.71□□□□□ -1.5
RAB5B-201ENST00000360299 HTN3P15516 51 aa5.71□□□□□ -1.5
RAB5B-201ENST00000360299 GATA2P23769 480 aaPredicted RBP5.71□□□□□ -1.5
RAB5B-201ENST00000360299 UBE2E1P51965 193 aa5.71□□□□□ -1.5
RAB5B-201ENST00000360299 VAMP3Q15836 100 aa5.71□□□□□ -1.5
RAB5B-201ENST00000360299 FAM53AQ6NSI3 398 aaPredicted RBP5.71□□□□□ -1.5
RAB5B-201ENST00000360299 TMEM70Q9BUB7 260 aa5.71□□□□□ -1.5
RAB5B-201ENST00000360299 TRBV7-1A0A0A6YYK4 115 aa5.71□□□□□ -1.5
RAB5B-201ENST00000360299 H3BTX0 84 aa5.71□□□□□ -1.5
RAB5B-201ENST00000360299 LBHQ53QV2 105 aaPredicted RBP5.71□□□□□ -1.5
RAB5B-201ENST00000360299 LCNL1Q6ZST4 164 aa5.71□□□□□ -1.5
RAB5B-201ENST00000360299 RNF166Q96A37 237 aaPredicted RBP5.71□□□□□ -1.5
RAB5B-201ENST00000360299 DOCK10Q96BY6 2186 aa5.71□□□□□ -1.5
RAB5B-201ENST00000360299 ZNF503-AS2A6NEH8 195 aa5.71□□□□□ -1.5
RAB5B-201ENST00000360299 EIF3GO75821 320 aaKnown RBP eCLIP5.71□□□□□ -1.5
RAB5B-201ENST00000360299 PAX8Q06710 450 aa5.71□□□□□ -1.5
RAB5B-201ENST00000360299 C10orf105Q8TEF2 133 aa5.71□□□□□ -1.5
RAB5B-201ENST00000360299 KCNS1Q96KK3 526 aa5.71□□□□□ -1.5
RAB5B-201ENST00000360299 PRDM13Q9H4Q3 707 aa5.71□□□□□ -1.5
RAB5B-201ENST00000360299 LY96Q9Y6Y9 160 aa5.71□□□□□ -1.5
RAB5B-201ENST00000360299 S4R3C0 116 aa5.71□□□□□ -1.5
RAB5B-201ENST00000360299 IGHV1-69DA0A0B4J2H0 117 aa5.7□□□□□ -1.5
RAB5B-201ENST00000360299 IZUMO1RA6ND01 250 aa5.7□□□□□ -1.5
RAB5B-201ENST00000360299 ZNF98A6NK75 572 aa5.7□□□□□ -1.5
RAB5B-201ENST00000360299 IGHV1-69P01742 117 aa5.7□□□□□ -1.5
RAB5B-201ENST00000360299 SRIP30626 198 aa5.7□□□□□ -1.5
RAB5B-201ENST00000360299 ASIPP42127 132 aa5.7□□□□□ -1.5
RAB5B-201ENST00000360299 WDR86Q86TI4 376 aa5.7□□□□□ -1.5
RAB5B-201ENST00000360299 LYPD1Q8N2G4 141 aa5.7□□□□□ -1.5
RAB5B-201ENST00000360299 OR10W1Q8NGF6 305 aa5.7□□□□□ -1.5
RAB5B-201ENST00000360299 HSPB9Q9BQS6 159 aa5.7□□□□□ -1.5
RAB5B-201ENST00000360299 ZNF581Q9P0T4 197 aa5.7□□□□□ -1.5
RAB5B-201ENST00000360299 FOLR2P14207 255 aa5.7□□□□□ -1.5
RAB5B-201ENST00000360299 ZNF562Q6V9R5 426 aa5.7□□□□□ -1.5
RAB5B-201ENST00000360299 C8orf31Q8N9H6 132 aa5.7□□□□□ -1.5
RAB5B-201ENST00000360299 OR8A1Q8NGG7 326 aa5.7□□□□□ -1.5
RAB5B-201ENST00000360299 CADP27708 2225 aa5.7□□□□□ -1.5
RAB5B-201ENST00000360299 IGHV2-70DA0A0C4DH43 119 aa5.7□□□□□ -1.5
RAB5B-201ENST00000360299 C15orf62A8K5M9 175 aa5.7□□□□□ -1.5
RAB5B-201ENST00000360299 OR5AN1Q8NGI8 311 aa5.7□□□□□ -1.5
RAB5B-201ENST00000360299 KIR2DL4Q99706 377 aa5.7□□□□□ -1.5
RAB5B-201ENST00000360299 IGHV3OR16-13A0A075B7E8 117 aa5.7□□□□□ -1.5
RAB5B-201ENST00000360299 A0A087X0M5 115 aa5.7□□□□□ -1.5
RAB5B-201ENST00000360299 IGHV3-74A0A0B4J1X5 117 aa5.7□□□□□ -1.5
RAB5B-201ENST00000360299 A0A1B0GX30 115 aa5.7□□□□□ -1.5
RAB5B-201ENST00000360299 FAM181BA6NEQ2 426 aa5.7□□□□□ -1.5
RAB5B-201ENST00000360299 C9JCJ5 164 aa5.7□□□□□ -1.5
RAB5B-201ENST00000360299 OVOL1O14753 267 aa5.7□□□□□ -1.5
RAB5B-201ENST00000360299 LEMD1Q68G75 181 aa5.7□□□□□ -1.5
RAB5B-201ENST00000360299 SEM1Q6ZVN7 128 aa5.7□□□□□ -1.5
RAB5B-201ENST00000360299 LRRC75A-AS1Q8N1F1 130 aa5.7□□□□□ -1.5
RAB5B-201ENST00000360299 RPP25LQ8N5L8 163 aaKnown RBP5.7□□□□□ -1.5
RAB5B-201ENST00000360299 TLN1Q9Y490 2541 aaKnown RBP5.7□□□□□ -1.5
RAB5B-201ENST00000360299 TRAV34A0A0B4J273 112 aa5.69□□□□□ -1.5
RAB5B-201ENST00000360299 MDKP21741 143 aaPredicted RBP5.69□□□□□ -1.5
RAB5B-201ENST00000360299 ZFP36P26651 326 aaKnown RBP5.69□□□□□ -1.5
RAB5B-201ENST00000360299 ZNF833PQ6ZTB9 187 aa5.69□□□□□ -1.5
RAB5B-201ENST00000360299 TBX15Q96SF7 602 aa5.69□□□□□ -1.5
RAB5B-201ENST00000360299 FOXC2Q99958 501 aa5.69□□□□□ -1.5
RAB5B-201ENST00000360299 TCAPO15273 167 aa5.69□□□□□ -1.5
RAB5B-201ENST00000360299 RNASE2P10153 161 aaKnown RBP5.69□□□□□ -1.5
RAB5B-201ENST00000360299 AREGP15514 252 aa5.69□□□□□ -1.5
RAB5B-201ENST00000360299 EMP1P54849 157 aa5.69□□□□□ -1.5
RAB5B-201ENST00000360299 DLX1P56177 255 aa5.69□□□□□ -1.5
RAB5B-201ENST00000360299 C10orf55Q5SWW7 151 aa5.69□□□□□ -1.5
RAB5B-201ENST00000360299 SCGB1D4Q6XE38 83 aa5.69□□□□□ -1.5
RAB5B-201ENST00000360299 TMEM183AQ8IXX5 376 aa5.69□□□□□ -1.5
RAB5B-201ENST00000360299 VN1R17PQ8TDU5 208 aa5.69□□□□□ -1.5
RAB5B-201ENST00000360299 TMEM14BQ9NUH8 114 aa5.69□□□□□ -1.5
RAB5B-201ENST00000360299 AP5S1Q9NUS5 200 aa5.69□□□□□ -1.5
RAB5B-201ENST00000360299 FAM223BA6NKX1 122 aa5.69□□□□□ -1.5
RAB5B-201ENST00000360299 IFITM10A6NMD0 228 aa5.69□□□□□ -1.5
RAB5B-201ENST00000360299 ZNF207O43670 478 aaKnown RBP5.69□□□□□ -1.5
RAB5B-201ENST00000360299 Q6ZRM9 215 aa5.69□□□□□ -1.5
RAB5B-201ENST00000360299 FAM223AQ8IWN6 122 aa5.69□□□□□ -1.5
RAB5B-201ENST00000360299 SGK494Q96LW2 274 aa5.69□□□□□ -1.5
RAB5B-201ENST00000360299 SMR3AQ99954 134 aa5.69□□□□□ -1.5
RAB5B-201ENST00000360299 IGHV3-49A0A0A0MS15 119 aa5.69□□□□□ -1.5
RAB5B-201ENST00000360299 LOC389332A0A1B0GUA5 103 aa5.69□□□□□ -1.5
RAB5B-201ENST00000360299 PSG1P11464 419 aa5.69□□□□□ -1.5
RAB5B-201ENST00000360299 LOXP28300 417 aaPredicted RBP5.69□□□□□ -1.5
RAB5B-201ENST00000360299 POU2AF1Q16633 256 aa5.69□□□□□ -1.5
RAB5B-201ENST00000360299 C15orf32Q32M92 178 aa5.69□□□□□ -1.5
RAB5B-201ENST00000360299 MGST2Q99735 147 aa5.69□□□□□ -1.5
RAB5B-201ENST00000360299 PRO1933Q9H354 126 aa5.69□□□□□ -1.5
RAB5B-201ENST00000360299 DCAF16Q9NXF7 216 aa5.69□□□□□ -1.5
RAB5B-201ENST00000360299 PSG8Q9UQ74 426 aa5.69□□□□□ -1.5
RAB5B-201ENST00000360299 ANKHD1Q8IWZ3 2542 aaKnown RBP5.68□□□□□ -1.5
RAB5B-201ENST00000360299 TRAV3A0A0B4J244 114 aa5.68□□□□□ -1.5
RAB5B-201ENST00000360299 A6NDN8 102 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms