RNA–Protein interactions for RNA: ENST00000360004.5

HLA-DRB1-201, Transcript of major histocompatibility complex, class II, DR beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DRB1, Length 1,229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB1-201ENST00000360004 TUBA4BQ9H853 241 aa14.41□□□□□ -0.1
HLA-DRB1-201ENST00000360004 WDR83OSQ9Y284 106 aa14.41□□□□□ -0.1
HLA-DRB1-201ENST00000360004 HSPB11Q9Y547 144 aa14.41□□□□□ -0.1
HLA-DRB1-201ENST00000360004 FXYD6-FXYD2A0A087WZ82 144 aa14.4□□□□□ -0.1
HLA-DRB1-201ENST00000360004 IFNA5P01569 189 aa14.4□□□□□ -0.1
HLA-DRB1-201ENST00000360004 AP2S1P53680 142 aaPredicted RBP14.4□□□□□ -0.1
HLA-DRB1-201ENST00000360004 ZNF709Q8N972 641 aa14.4□□□□□ -0.1
HLA-DRB1-201ENST00000360004 MGST2Q99735 147 aa14.4□□□□□ -0.1
HLA-DRB1-201ENST00000360004 ARL6Q9H0F7 186 aa14.4□□□□□ -0.1
HLA-DRB1-201ENST00000360004 FBXL17Q9UF56 701 aa14.4□□□□□ -0.1
HLA-DRB1-201ENST00000360004 HIGD1AQ9Y241 93 aa14.4□□□□□ -0.1
HLA-DRB1-201ENST00000360004 SORL1Q92673 2214 aa14.39□□□□□ -0.11
HLA-DRB1-201ENST00000360004 COX7A2P2O60397 106 aa14.39□□□□□ -0.11
HLA-DRB1-201ENST00000360004 MPDU1O75352 247 aa14.39□□□□□ -0.11
HLA-DRB1-201ENST00000360004 CD7P09564 240 aa14.39□□□□□ -0.11
HLA-DRB1-201ENST00000360004 VWC2Q2TAL6 325 aa14.39□□□□□ -0.11
HLA-DRB1-201ENST00000360004 C16orf54Q6UWD8 224 aa14.39□□□□□ -0.11
HLA-DRB1-201ENST00000360004 TMEM182Q6ZP80 229 aaPredicted RBP14.39□□□□□ -0.11
HLA-DRB1-201ENST00000360004 Q6ZRG5 221 aa14.39□□□□□ -0.11
HLA-DRB1-201ENST00000360004 OR8I2Q8N0Y5 310 aa14.39□□□□□ -0.11
HLA-DRB1-201ENST00000360004 INO80EQ8NBZ0 244 aaPredicted RBP14.39□□□□□ -0.11
HLA-DRB1-201ENST00000360004 SCGB1C1Q8TD33 95 aa14.39□□□□□ -0.11
HLA-DRB1-201ENST00000360004 ATP5SQ99766 215 aa14.39□□□□□ -0.11
HLA-DRB1-201ENST00000360004 SLC25A22Q9H936 323 aa14.39□□□□□ -0.11
HLA-DRB1-201ENST00000360004 LSM4Q9Y4Z0 139 aaKnown RBP14.39□□□□□ -0.11
HLA-DRB1-201ENST00000360004 BUB3O43684 328 aa14.38□□□□□ -0.11
HLA-DRB1-201ENST00000360004 LYL1P12980 280 aa14.38□□□□□ -0.11
HLA-DRB1-201ENST00000360004 PXDC1Q5TGL8 231 aa14.38□□□□□ -0.11
HLA-DRB1-201ENST00000360004 SIGLEC15Q6ZMC9 328 aa14.38□□□□□ -0.11
HLA-DRB1-201ENST00000360004 MS4A6AQ9H2W1 248 aa14.38□□□□□ -0.11
HLA-DRB1-201ENST00000360004 SLC45A2Q9UMX9 530 aa14.38□□□□□ -0.11
HLA-DRB1-201ENST00000360004 U3KQE9 123 aa14.38□□□□□ -0.11
HLA-DRB1-201ENST00000360004 OR11H12B2RN74 326 aa14.37□□□□□ -0.11
HLA-DRB1-201ENST00000360004 CMC4P56277 68 aaPredicted RBP14.37□□□□□ -0.11
HLA-DRB1-201ENST00000360004 GGTLC1Q9BX51 225 aa14.37□□□□□ -0.11
HLA-DRB1-201ENST00000360004 KCNIP2Q9NS61 270 aa14.37□□□□□ -0.11
HLA-DRB1-201ENST00000360004 UBQLN2Q9UHD9 624 aa14.37□□□□□ -0.11
HLA-DRB1-201ENST00000360004 RNF24Q9Y225 148 aa14.37□□□□□ -0.11
HLA-DRB1-201ENST00000360004 C17orf112F2Z3M2 114 aa14.36□□□□□ -0.11
HLA-DRB1-201ENST00000360004 C1orf194Q5T5A4 169 aa14.36□□□□□ -0.11
HLA-DRB1-201ENST00000360004 MIC13Q5XKP0 118 aa14.36□□□□□ -0.11
HLA-DRB1-201ENST00000360004 FAM90A2PQ658T7 463 aa14.36□□□□□ -0.11
HLA-DRB1-201ENST00000360004 STPG3Q8N7X2 389 aa14.36□□□□□ -0.11
HLA-DRB1-201ENST00000360004 OR1L4Q8NGR5 311 aa14.36□□□□□ -0.11
HLA-DRB1-201ENST00000360004 GLMPQ8WWB7 406 aa14.36□□□□□ -0.11
HLA-DRB1-201ENST00000360004 IGHV4-30-4P0DP06 118 aa14.35□□□□□ -0.11
HLA-DRB1-201ENST00000360004 GALR1P47211 349 aa14.35□□□□□ -0.11
HLA-DRB1-201ENST00000360004 B2MP61769 119 aa14.35□□□□□ -0.11
HLA-DRB1-201ENST00000360004 OPCMLQ14982 345 aa14.35□□□□□ -0.11
HLA-DRB1-201ENST00000360004 Q8N1Y9 231 aa14.35□□□□□ -0.11
HLA-DRB1-201ENST00000360004 DEFB125Q8N687 156 aa14.35□□□□□ -0.11
HLA-DRB1-201ENST00000360004 NPCDR1Q9BY65 106 aa14.35□□□□□ -0.11
HLA-DRB1-201ENST00000360004 ARV1Q9H2C2 271 aa14.35□□□□□ -0.11
HLA-DRB1-201ENST00000360004 SRD5A3Q9H8P0 318 aa14.35□□□□□ -0.11
HLA-DRB1-201ENST00000360004 PXMP4Q9Y6I8 212 aa14.35□□□□□ -0.11
HLA-DRB1-201ENST00000360004 hCG_2014768A0A024R1R8 64 aa14.34□□□□□ -0.11
HLA-DRB1-201ENST00000360004 ZNF98A6NK75 572 aa14.34□□□□□ -0.11
HLA-DRB1-201ENST00000360004 RPL29P47914 159 aaKnown RBP14.34□□□□□ -0.11
HLA-DRB1-201ENST00000360004 PLP1P60201 277 aa14.34□□□□□ -0.11
HLA-DRB1-201ENST00000360004 Q5BKY6 102 aa14.34□□□□□ -0.11
HLA-DRB1-201ENST00000360004 C10orf113Q5VZT2 155 aa14.34□□□□□ -0.11
HLA-DRB1-201ENST00000360004 PFDN5Q99471 154 aa14.34□□□□□ -0.11
HLA-DRB1-201ENST00000360004 SLC25A39Q9BZJ4 359 aaPredicted RBP14.34□□□□□ -0.11
HLA-DRB1-201ENST00000360004 WDR61Q9GZS3 305 aaKnown RBP14.34□□□□□ -0.11
HLA-DRB1-201ENST00000360004 SLC39A9Q9NUM3 307 aa14.34□□□□□ -0.11
HLA-DRB1-201ENST00000360004 ELOA3CA0A087WX78 387 aaPredicted RBP14.33□□□□□ -0.12
HLA-DRB1-201ENST00000360004 TRAV2A0A0B4J234 112 aa14.33□□□□□ -0.12
HLA-DRB1-201ENST00000360004 LEMD1Q68G75 181 aa14.33□□□□□ -0.12
HLA-DRB1-201ENST00000360004 CHAC2Q8WUX2 184 aa14.33□□□□□ -0.12
HLA-DRB1-201ENST00000360004 GPR82Q96P67 336 aa14.33□□□□□ -0.12
HLA-DRB1-201ENST00000360004 AQP10Q96PS8 301 aa14.33□□□□□ -0.12
HLA-DRB1-201ENST00000360004 UHRF2Q96PU4 802 aa14.33□□□□□ -0.12
HLA-DRB1-201ENST00000360004 SHANK2-AS3Q9BTD1 123 aa14.33□□□□□ -0.12
HLA-DRB1-201ENST00000360004 SCRT1Q9BWW7 348 aa14.33□□□□□ -0.12
HLA-DRB1-201ENST00000360004 WFDC10AQ9H1F0 79 aa14.33□□□□□ -0.12
HLA-DRB1-201ENST00000360004 NRN1Q9NPD7 142 aa14.33□□□□□ -0.12
HLA-DRB1-201ENST00000360004 H3BRN7 92 aa14.32□□□□□ -0.12
HLA-DRB1-201ENST00000360004 FRMD6-AS1P0C7T7 363 aa14.32□□□□□ -0.12
HLA-DRB1-201ENST00000360004 ATF4P18848 351 aaPredicted RBP14.32□□□□□ -0.12
HLA-DRB1-201ENST00000360004 ZNF266Q14584 549 aa14.32□□□□□ -0.12
HLA-DRB1-201ENST00000360004 Q6ZNX1 250 aa14.32□□□□□ -0.12
HLA-DRB1-201ENST00000360004 LINC00305Q7Z4B0 112 aa14.32□□□□□ -0.12
HLA-DRB1-201ENST00000360004 DNAJC4Q9NNZ3 241 aa14.32□□□□□ -0.12
HLA-DRB1-201ENST00000360004 SMLR1H3BR10 107 aa14.31□□□□□ -0.12
HLA-DRB1-201ENST00000360004 ARPC5O15511 151 aa14.31□□□□□ -0.12
HLA-DRB1-201ENST00000360004 RPL7P18124 248 aaKnown RBP14.31□□□□□ -0.12
HLA-DRB1-201ENST00000360004 SNRPD3P62318 126 aaKnown RBP14.31□□□□□ -0.12
HLA-DRB1-201ENST00000360004 PRR20EP86478 221 aa14.31□□□□□ -0.12
HLA-DRB1-201ENST00000360004 PRR20CP86479 221 aa14.31□□□□□ -0.12
HLA-DRB1-201ENST00000360004 PRR20DP86480 221 aa14.31□□□□□ -0.12
HLA-DRB1-201ENST00000360004 PRR20BP86481 221 aa14.31□□□□□ -0.12
HLA-DRB1-201ENST00000360004 PRR20AP86496 221 aa14.31□□□□□ -0.12
HLA-DRB1-201ENST00000360004 SLC25A32Q9H2D1 315 aa14.31□□□□□ -0.12
HLA-DRB1-201ENST00000360004 K7EQG2 157 aa14.3□□□□□ -0.12
HLA-DRB1-201ENST00000360004 ZNF688P0C7X2 276 aa14.3□□□□□ -0.12
HLA-DRB1-201ENST00000360004 ID1P41134 155 aa14.3□□□□□ -0.12
HLA-DRB1-201ENST00000360004 PATE2Q6UY27 113 aa14.3□□□□□ -0.12
HLA-DRB1-201ENST00000360004 ASCL2Q99929 193 aa14.3□□□□□ -0.12
HLA-DRB1-201ENST00000360004 B9D2Q9BPU9 175 aa14.3□□□□□ -0.12
HLA-DRB1-201ENST00000360004 RSG1Q9BU20 258 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms