RNA–Protein interactions for RNA: ENST00000360001.10

SDF4-202, Transcript of stromal cell derived factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SDF4, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-202ENST00000360001 Q71RC1 249 aaPredicted RBP17.94■□□□□ 0.46
SDF4-202ENST00000360001 PUS1Q9Y606 427 aaKnown RBP eCLIP17.94■□□□□ 0.46
SDF4-202ENST00000360001 PAGE4O60829 102 aa17.93■□□□□ 0.46
SDF4-202ENST00000360001 SRP19P09132 144 aaKnown RBP17.93■□□□□ 0.46
SDF4-202ENST00000360001 ZNF600Q6ZNG1 722 aa17.93■□□□□ 0.46
SDF4-202ENST00000360001 SLC35B3Q9H1N7 401 aa17.93■□□□□ 0.46
SDF4-202ENST00000360001 IGHV3-35A0A0C4DH35 117 aa17.93■□□□□ 0.46
SDF4-202ENST00000360001 A0A0G2JLM5 398 aa17.93■□□□□ 0.46
SDF4-202ENST00000360001 C10orf91Q5T1B1 145 aa17.93■□□□□ 0.46
SDF4-202ENST00000360001 SLC25A39Q9BZJ4 359 aaPredicted RBP17.93■□□□□ 0.46
SDF4-202ENST00000360001 TAGLN2P37802 199 aaKnown RBP17.92■□□□□ 0.46
SDF4-202ENST00000360001 SLC35B1P78383 322 aa17.92■□□□□ 0.46
SDF4-202ENST00000360001 MEF2BQ02080 365 aaPredicted RBP17.92■□□□□ 0.46
SDF4-202ENST00000360001 Q6ZSV7 163 aa17.92■□□□□ 0.46
SDF4-202ENST00000360001 SUN5Q8TC36 379 aa17.92■□□□□ 0.46
SDF4-202ENST00000360001 ZNF418Q8TF45 676 aaPredicted RBP17.92■□□□□ 0.46
SDF4-202ENST00000360001 NF1P21359 2839 aa17.92■□□□□ 0.46
SDF4-202ENST00000360001 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP17.91■□□□□ 0.46
SDF4-202ENST00000360001 PPP5D1E7EU14 171 aa17.91■□□□□ 0.46
SDF4-202ENST00000360001 F8W036 122 aa17.91■□□□□ 0.46
SDF4-202ENST00000360001 IGHV3-11P01762 117 aa17.91■□□□□ 0.46
SDF4-202ENST00000360001 CD81P60033 236 aa17.91■□□□□ 0.46
SDF4-202ENST00000360001 UBE2G2P60604 165 aa17.91■□□□□ 0.46
SDF4-202ENST00000360001 KIAA0141Q14154 515 aaPredicted RBP17.91■□□□□ 0.46
SDF4-202ENST00000360001 LEMD1Q68G75 181 aa17.91■□□□□ 0.46
SDF4-202ENST00000360001 SEC11CQ9BY50 192 aa17.91■□□□□ 0.46
SDF4-202ENST00000360001 GNB4Q9HAV0 340 aa17.91■□□□□ 0.46
SDF4-202ENST00000360001 TMEM167BQ9NRX6 74 aa17.91■□□□□ 0.46
SDF4-202ENST00000360001 TRBV12-3P01733 135 aa17.91■□□□□ 0.46
SDF4-202ENST00000360001 RNASE1P07998 156 aaKnown RBP17.91■□□□□ 0.46
SDF4-202ENST00000360001 OR10J4P0C629 311 aa17.91■□□□□ 0.46
SDF4-202ENST00000360001 ZNF343Q6P1L6 599 aa17.91■□□□□ 0.46
SDF4-202ENST00000360001 TEX38Q6PEX7 206 aa17.91■□□□□ 0.46
SDF4-202ENST00000360001 NSD1Q96L73 2696 aaPredicted RBP17.9■□□□□ 0.46
SDF4-202ENST00000360001 PYYP10082 97 aa17.9■□□□□ 0.46
SDF4-202ENST00000360001 HILS1P60008 231 aa17.9■□□□□ 0.46
SDF4-202ENST00000360001 FOXE3Q13461 319 aa17.9■□□□□ 0.46
SDF4-202ENST00000360001 TOMM20LQ6UXN7 152 aa17.9■□□□□ 0.46
SDF4-202ENST00000360001 SHANK2-AS3Q9BTD1 123 aa17.9■□□□□ 0.46
SDF4-202ENST00000360001 PAXXQ9BUH6 204 aa17.9■□□□□ 0.46
SDF4-202ENST00000360001 ZFAND3Q9H8U3 227 aa17.9■□□□□ 0.46
SDF4-202ENST00000360001 INAFM1C9JVW0 142 aa17.9■□□□□ 0.46
SDF4-202ENST00000360001 H3BRN7 92 aa17.9■□□□□ 0.46
SDF4-202ENST00000360001 OR4X2Q8NGF9 303 aa17.9■□□□□ 0.46
SDF4-202ENST00000360001 OR51M1Q9H341 326 aa17.9■□□□□ 0.46
SDF4-202ENST00000360001 CARHSP1Q9Y2V2 147 aaKnown RBP17.9■□□□□ 0.46
SDF4-202ENST00000360001 YTHDF2Q9Y5A9 579 aaKnown RBP17.9■□□□□ 0.46
SDF4-202ENST00000360001 ELANEP08246 267 aa17.89■□□□□ 0.45
SDF4-202ENST00000360001 ARL3P36405 182 aa17.89■□□□□ 0.45
SDF4-202ENST00000360001 UBE2L3P68036 154 aaKnown RBP17.89■□□□□ 0.45
SDF4-202ENST00000360001 CYB561D1Q8N8Q1 229 aa17.89■□□□□ 0.45
SDF4-202ENST00000360001 APOC3P02656 99 aa17.88■□□□□ 0.45
SDF4-202ENST00000360001 RELQ04864 619 aaPredicted RBP17.88■□□□□ 0.45
SDF4-202ENST00000360001 STXBP6Q8NFX7 210 aa17.88■□□□□ 0.45
SDF4-202ENST00000360001 SETXQ7Z333 2677 aaKnown RBP17.88■□□□□ 0.45
SDF4-202ENST00000360001 FAM74A7A6NL05 159 aa17.88■□□□□ 0.45
SDF4-202ENST00000360001 C11orf94C9JXX5 98 aa17.88■□□□□ 0.45
SDF4-202ENST00000360001 RPLP1P05386 114 aaKnown RBP17.88■□□□□ 0.45
SDF4-202ENST00000360001 GP9P14770 177 aa17.88■□□□□ 0.45
SDF4-202ENST00000360001 ATP5G3P48201 142 aa17.88■□□□□ 0.45
SDF4-202ENST00000360001 RPL15P61313 204 aaKnown RBP17.88■□□□□ 0.45
SDF4-202ENST00000360001 CST9LP1Q5W188 147 aa17.88■□□□□ 0.45
SDF4-202ENST00000360001 RNF152Q8N8N0 203 aa17.88■□□□□ 0.45
SDF4-202ENST00000360001 MYOZ3Q8TDC0 251 aa17.88■□□□□ 0.45
SDF4-202ENST00000360001 FXYD5Q96DB9 178 aa17.88■□□□□ 0.45
SDF4-202ENST00000360001 IGHV3OR16-8A0A075B7F1 116 aa17.87■□□□□ 0.45
SDF4-202ENST00000360001 ARL2-SNX15V9GYD0 113 aa17.87■□□□□ 0.45
SDF4-202ENST00000360001 BMPR1BO00238 502 aa17.86■□□□□ 0.45
SDF4-202ENST00000360001 OR4F5Q8NH21 305 aa17.86■□□□□ 0.45
SDF4-202ENST00000360001 OR4F4Q96R69 305 aa17.86■□□□□ 0.45
SDF4-202ENST00000360001 ZNF98A6NK75 572 aa17.86■□□□□ 0.45
SDF4-202ENST00000360001 NDUFS6O75380 124 aaKnown RBP17.86■□□□□ 0.45
SDF4-202ENST00000360001 CEBPGP53567 150 aa17.86■□□□□ 0.45
SDF4-202ENST00000360001 SOHLH1Q5JUK2 328 aa17.86■□□□□ 0.45
SDF4-202ENST00000360001 RABAC1Q9UI14 185 aa17.86■□□□□ 0.45
SDF4-202ENST00000360001 GUCA2BQ16661 112 aa17.85■□□□□ 0.45
SDF4-202ENST00000360001 FAM90A2PQ658T7 463 aa17.85■□□□□ 0.45
SDF4-202ENST00000360001 S100A7AQ86SG5 101 aa17.85■□□□□ 0.45
SDF4-202ENST00000360001 TMEM14CQ9P0S9 112 aa17.85■□□□□ 0.45
SDF4-202ENST00000360001 OR5B12Q96R08 314 aa17.84■□□□□ 0.45
SDF4-202ENST00000360001 TXNDC17Q9BRA2 123 aa17.84■□□□□ 0.45
SDF4-202ENST00000360001 CLPSL1A2RUU4 121 aa17.84■□□□□ 0.45
SDF4-202ENST00000360001 TMEM250H0YL14 139 aa17.84■□□□□ 0.45
SDF4-202ENST00000360001 CRYBA1P05813 215 aa17.84■□□□□ 0.45
SDF4-202ENST00000360001 KLHDC1Q8N7A1 406 aa17.84■□□□□ 0.45
SDF4-202ENST00000360001 FN1P02751 2386 aaKnown RBP17.83■□□□□ 0.45
SDF4-202ENST00000360001 SNRPCP09234 159 aaKnown RBP17.83■□□□□ 0.44
SDF4-202ENST00000360001 PEF1Q9UBV8 284 aaKnown RBP17.83■□□□□ 0.44
SDF4-202ENST00000360001 A0A1W2PRE2 83 aa17.82■□□□□ 0.44
SDF4-202ENST00000360001 FAM209BQ5JX69 171 aa17.82■□□□□ 0.44
SDF4-202ENST00000360001 MRPS12O15235 138 aaKnown RBP17.82■□□□□ 0.44
SDF4-202ENST00000360001 PDE6DO43924 150 aa17.82■□□□□ 0.44
SDF4-202ENST00000360001 NPPCP23582 126 aa17.82■□□□□ 0.44
SDF4-202ENST00000360001 BPIFA4PQ86YQ2 179 aa17.82■□□□□ 0.44
SDF4-202ENST00000360001 JMJD8Q96S16 334 aa17.82■□□□□ 0.44
SDF4-202ENST00000360001 GGTLC3B5MD39 225 aa17.81■□□□□ 0.44
SDF4-202ENST00000360001 NDUFA4O00483 81 aa17.81■□□□□ 0.44
SDF4-202ENST00000360001 NBEAP1P0C6P0 100 aa17.81■□□□□ 0.44
SDF4-202ENST00000360001 CCDC28AQ8IWP9 274 aa17.81■□□□□ 0.44
SDF4-202ENST00000360001 UBE2E2Q96LR5 201 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms