RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 IGKV3OR2-268A0A0C4DH90 116 aa11.23□□□□□ -0.61
VCP-201ENST00000358901 PPP1R17O96001 155 aa11.23□□□□□ -0.61
VCP-201ENST00000358901 COX6B1P14854 86 aa11.23□□□□□ -0.61
VCP-201ENST00000358901 TNFRSF14Q92956 283 aa11.23□□□□□ -0.61
VCP-201ENST00000358901 NHP2Q9NX24 153 aaKnown RBP11.23□□□□□ -0.61
VCP-201ENST00000358901 TMEM178BH3BS89 294 aa11.23□□□□□ -0.61
VCP-201ENST00000358901 CIRBPQ14011 172 aaKnown RBP11.23□□□□□ -0.61
VCP-201ENST00000358901 SFTA2Q6UW10 78 aa11.23□□□□□ -0.61
VCP-201ENST00000358901 BEND2Q8NDZ0 799 aa11.23□□□□□ -0.61
VCP-201ENST00000358901 IFI27L1Q96BM0 104 aa11.23□□□□□ -0.61
VCP-201ENST00000358901 C7orf69Q9H7B7 122 aa11.23□□□□□ -0.61
VCP-201ENST00000358901 A0A1B0GUS0 222 aa11.23□□□□□ -0.61
VCP-201ENST00000358901 PSMG4Q5JS54 123 aa11.23□□□□□ -0.61
VCP-201ENST00000358901 MEIG1Q5JSS6 88 aa11.23□□□□□ -0.61
VCP-201ENST00000358901 LINC00527Q9UJ94 153 aa11.23□□□□□ -0.61
VCP-201ENST00000358901 C19orf67A6NJJ6 358 aa11.22□□□□□ -0.61
VCP-201ENST00000358901 EVI2AP22794 236 aa11.22□□□□□ -0.61
VCP-201ENST00000358901 RNASE4P34096 147 aaKnown RBP11.22□□□□□ -0.61
VCP-201ENST00000358901 ZNF672Q499Z4 452 aaPredicted RBP11.22□□□□□ -0.61
VCP-201ENST00000358901 NUP35Q8NFH5 326 aa11.22□□□□□ -0.61
VCP-201ENST00000358901 ZNF418Q8TF45 676 aaPredicted RBP11.22□□□□□ -0.61
VCP-201ENST00000358901 CHCHD1Q96BP2 118 aaKnown RBP11.22□□□□□ -0.61
VCP-201ENST00000358901 SLC50A1Q9BRV3 221 aa11.22□□□□□ -0.61
VCP-201ENST00000358901 SLC25A39Q9BZJ4 359 aaPredicted RBP11.22□□□□□ -0.61
VCP-201ENST00000358901 FNDC4Q9H6D8 234 aaPredicted RBP11.22□□□□□ -0.61
VCP-201ENST00000358901 H0YJW9 148 aa11.22□□□□□ -0.61
VCP-201ENST00000358901 UBE2L6O14933 153 aa11.22□□□□□ -0.61
VCP-201ENST00000358901 NUTF2P61970 127 aaKnown RBP11.22□□□□□ -0.61
VCP-201ENST00000358901 SLC25A48Q6ZT89 311 aaKnown RBP11.22□□□□□ -0.61
VCP-201ENST00000358901 C5orf30Q96GV9 206 aa11.22□□□□□ -0.61
VCP-201ENST00000358901 VKORC1Q9BQB6 163 aa11.22□□□□□ -0.61
VCP-201ENST00000358901 IGKV1-39P01597 117 aa11.22□□□□□ -0.61
VCP-201ENST00000358901 IGKV1D-39P04432 117 aa11.22□□□□□ -0.61
VCP-201ENST00000358901 DMRTC2Q8IXT2 367 aaPredicted RBP11.22□□□□□ -0.61
VCP-201ENST00000358901 HAX1O00165 279 aa11.21□□□□□ -0.61
VCP-201ENST00000358901 PPBPP02775 128 aa11.21□□□□□ -0.61
VCP-201ENST00000358901 RNASE2P10153 161 aaKnown RBP11.21□□□□□ -0.61
VCP-201ENST00000358901 CSRP1P21291 193 aaKnown RBP11.21□□□□□ -0.61
VCP-201ENST00000358901 SUMO2P61956 95 aaKnown RBP11.21□□□□□ -0.61
VCP-201ENST00000358901 NXT2Q9NPJ8 142 aaKnown RBP11.21□□□□□ -0.61
VCP-201ENST00000358901 JKAMPQ9P055 326 aa11.21□□□□□ -0.61
VCP-201ENST00000358901 SELENOKQ9Y6D0 94 aa11.21□□□□□ -0.61
VCP-201ENST00000358901 LY96Q9Y6Y9 160 aa11.21□□□□□ -0.61
VCP-201ENST00000358901 A0A1B0GWJ7 208 aa11.21□□□□□ -0.61
VCP-201ENST00000358901 WNT2P09544 360 aa11.21□□□□□ -0.61
VCP-201ENST00000358901 GAFA1Q96PS6 74 aa11.21□□□□□ -0.61
VCP-201ENST00000358901 CCL19Q99731 98 aa11.21□□□□□ -0.61
VCP-201ENST00000358901 ST20Q9HBF5 79 aa11.21□□□□□ -0.61
VCP-201ENST00000358901 ZNRD1Q9P1U0 126 aa11.21□□□□□ -0.61
VCP-201ENST00000358901 IGHV1-3A0A0C4DH29 117 aa11.21□□□□□ -0.62
VCP-201ENST00000358901 LDLRAD2Q5SZI1 272 aa11.21□□□□□ -0.62
VCP-201ENST00000358901 IGKV2-40A0A087WW87 121 aaPredicted RBP11.21□□□□□ -0.62
VCP-201ENST00000358901 FAM181BA6NEQ2 426 aa11.21□□□□□ -0.62
VCP-201ENST00000358901 NCR2O95944 276 aa11.21□□□□□ -0.62
VCP-201ENST00000358901 IGKV2D-40P01614 121 aaPredicted RBP11.21□□□□□ -0.62
VCP-201ENST00000358901 RPL15P61313 204 aaKnown RBP11.21□□□□□ -0.62
VCP-201ENST00000358901 ZNF474Q6S9Z5 364 aaPredicted RBP11.21□□□□□ -0.62
VCP-201ENST00000358901 CSPG4Q6UVK1 2322 aa11.2□□□□□ -0.62
VCP-201ENST00000358901 FAM168AQ92567 244 aa11.2□□□□□ -0.62
VCP-201ENST00000358901 TNFRSF18Q9Y5U5 241 aa11.2□□□□□ -0.62
VCP-201ENST00000358901 ZNF138P52744 262 aa11.2□□□□□ -0.62
VCP-201ENST00000358901 IL15RAQ13261 267 aa11.2□□□□□ -0.62
VCP-201ENST00000358901 TRGV9Q99603 122 aa11.2□□□□□ -0.62
VCP-201ENST00000358901 MEGF9Q9H1U4 602 aa11.2□□□□□ -0.62
VCP-201ENST00000358901 TGFAP01135 160 aa11.19□□□□□ -0.62
VCP-201ENST00000358901 IGHG3P01860 377 aa11.19□□□□□ -0.62
VCP-201ENST00000358901 ZNF726P1Q15940 193 aa11.19□□□□□ -0.62
VCP-201ENST00000358901 JMJD8Q96S16 334 aa11.19□□□□□ -0.62
VCP-201ENST00000358901 MUC6Q6W4X9 2439 aa11.19□□□□□ -0.62
VCP-201ENST00000358901 MYO18BQ8IUG5 2567 aa11.19□□□□□ -0.62
VCP-201ENST00000358901 ZNF503-AS2A6NEH8 195 aa11.19□□□□□ -0.62
VCP-201ENST00000358901 C10orf91Q5T1B1 145 aa11.19□□□□□ -0.62
VCP-201ENST00000358901 MRAP2Q96G30 205 aa11.19□□□□□ -0.62
VCP-201ENST00000358901 hDV102S1A0JD36 115 aa11.19□□□□□ -0.62
VCP-201ENST00000358901 MBD3L4A6NDZ8 208 aaPredicted RBP11.19□□□□□ -0.62
VCP-201ENST00000358901 MBD3L3A6NE82 208 aaPredicted RBP11.19□□□□□ -0.62
VCP-201ENST00000358901 MBD3L5A6NJ08 208 aaPredicted RBP11.19□□□□□ -0.62
VCP-201ENST00000358901 D6R8Y8 96 aa11.19□□□□□ -0.62
VCP-201ENST00000358901 H7C1H1 209 aa11.19□□□□□ -0.62
VCP-201ENST00000358901 DLEU1O43261 78 aa11.19□□□□□ -0.62
VCP-201ENST00000358901 DPM2O94777 84 aa11.19□□□□□ -0.62
VCP-201ENST00000358901 MBD3L2Q8NHZ7 208 aaPredicted RBP11.19□□□□□ -0.62
VCP-201ENST00000358901 THBDP07204 575 aa11.19□□□□□ -0.62
VCP-201ENST00000358901 OR2K2Q8NGT1 345 aa11.19□□□□□ -0.62
VCP-201ENST00000358901 NAA38Q9BRA0 125 aaKnown RBP11.19□□□□□ -0.62
VCP-201ENST00000358901 ANKHD1Q8IWZ3 2542 aaKnown RBP11.18□□□□□ -0.62
VCP-201ENST00000358901 CD7P09564 240 aa11.18□□□□□ -0.62
VCP-201ENST00000358901 LMO1P25800 156 aa11.18□□□□□ -0.62
VCP-201ENST00000358901 FXYD7P58549 80 aa11.18□□□□□ -0.62
VCP-201ENST00000358901 KLRD1Q13241 179 aa11.18□□□□□ -0.62
VCP-201ENST00000358901 C15orf32Q32M92 178 aa11.18□□□□□ -0.62
VCP-201ENST00000358901 OR4X2Q8NGF9 303 aa11.18□□□□□ -0.62
VCP-201ENST00000358901 ORAOV1Q8WV07 137 aa11.18□□□□□ -0.62
VCP-201ENST00000358901 SIGLEC9Q9Y336 463 aa11.18□□□□□ -0.62
VCP-201ENST00000358901 FREM1Q5H8C1 2179 aa11.18□□□□□ -0.62
VCP-201ENST00000358901 RNF166Q96A37 237 aaPredicted RBP11.18□□□□□ -0.62
VCP-201ENST00000358901 LY6G6EA0A0G2JKS1 128 aa11.18□□□□□ -0.62
VCP-201ENST00000358901 RASL11AQ6T310 242 aa11.18□□□□□ -0.62
VCP-201ENST00000358901 LYZL1Q6UWQ5 148 aa11.18□□□□□ -0.62
VCP-201ENST00000358901 LYPD2Q6UXB3 125 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 127.4 ms