RNA–Protein interactions for RNA: ENST00000358540.6

PTPN5-201, Transcript of protein tyrosine phosphatase, non-receptor type 5, humanhuman

TSL 1 (best) BASIC

Gene PTPN5, Length 3,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN5-201ENST00000358540 Q56UQ5 140 aa12.81□□□□□ -0.36
PTPN5-201ENST00000358540 MRPL54Q6P161 138 aaKnown RBP12.81□□□□□ -0.36
PTPN5-201ENST00000358540 PPBPP02775 128 aa12.81□□□□□ -0.36
PTPN5-201ENST00000358540 FXYD3Q14802 87 aa12.81□□□□□ -0.36
PTPN5-201ENST00000358540 ZNF503Q96F45 646 aa12.81□□□□□ -0.36
PTPN5-201ENST00000358540 CST9LQ9H4G1 147 aa12.81□□□□□ -0.36
PTPN5-201ENST00000358540 MOSP00540 346 aa12.8□□□□□ -0.36
PTPN5-201ENST00000358540 RPL19P84098 196 aaKnown RBP12.8□□□□□ -0.36
PTPN5-201ENST00000358540 OR4A5Q8NH83 315 aa12.8□□□□□ -0.36
PTPN5-201ENST00000358540 TSKUQ8WUA8 353 aa12.8□□□□□ -0.36
PTPN5-201ENST00000358540 TP73-AS1Q9UF72 201 aa12.8□□□□□ -0.36
PTPN5-201ENST00000358540 TRAV30A0A087WSZ9 112 aa12.8□□□□□ -0.36
PTPN5-201ENST00000358540 IGLC7A0M8Q6 106 aa12.8□□□□□ -0.36
PTPN5-201ENST00000358540 PSG1P11464 419 aa12.8□□□□□ -0.36
PTPN5-201ENST00000358540 TMEM249Q2WGJ8 235 aa12.8□□□□□ -0.36
PTPN5-201ENST00000358540 OCIAD2Q56VL3 154 aa12.8□□□□□ -0.36
PTPN5-201ENST00000358540 OR10J3Q5JRS4 329 aa12.8□□□□□ -0.36
PTPN5-201ENST00000358540 FNDC10F2Z333 226 aa12.79□□□□□ -0.36
PTPN5-201ENST00000358540 MFAP2P55001 183 aa12.79□□□□□ -0.36
PTPN5-201ENST00000358540 RPL27AP46776 148 aaKnown RBP12.79□□□□□ -0.36
PTPN5-201ENST00000358540 LGALS7P47929 136 aa12.79□□□□□ -0.36
PTPN5-201ENST00000358540 C11orf71Q6IPW1 123 aa12.79□□□□□ -0.36
PTPN5-201ENST00000358540 EAF1Q96JC9 268 aaPredicted RBP12.79□□□□□ -0.36
PTPN5-201ENST00000358540 RNASE7Q9H1E1 156 aaKnown RBP12.79□□□□□ -0.36
PTPN5-201ENST00000358540 V9GYV3 84 aa12.79□□□□□ -0.36
PTPN5-201ENST00000358540 TRBV9A0A0B4J1U6 114 aa12.79□□□□□ -0.36
PTPN5-201ENST00000358540 LIPFP07098 398 aa12.79□□□□□ -0.36
PTPN5-201ENST00000358540 PLGLAQ15195 96 aa12.79□□□□□ -0.36
PTPN5-201ENST00000358540 TMEM136Q6ZRR5 245 aa12.79□□□□□ -0.36
PTPN5-201ENST00000358540 TIMD4Q96H15 378 aa12.79□□□□□ -0.36
PTPN5-201ENST00000358540 SIGLEC9Q9Y336 463 aa12.79□□□□□ -0.36
PTPN5-201ENST00000358540 BMPR1BO00238 502 aa12.78□□□□□ -0.36
PTPN5-201ENST00000358540 IGLL1P15814 213 aa12.78□□□□□ -0.36
PTPN5-201ENST00000358540 CDC42EP3Q9UKI2 254 aa12.78□□□□□ -0.36
PTPN5-201ENST00000358540 TIMM23O14925 209 aa12.78□□□□□ -0.36
PTPN5-201ENST00000358540 MT-CO2P00403 227 aa12.78□□□□□ -0.36
PTPN5-201ENST00000358540 WDR73Q6P4I2 378 aa12.78□□□□□ -0.36
PTPN5-201ENST00000358540 OR4F17Q8NGA8 305 aa12.78□□□□□ -0.36
PTPN5-201ENST00000358540 SLC25A33Q9BSK2 321 aa12.78□□□□□ -0.36
PTPN5-201ENST00000358540 UBTD1Q9HAC8 227 aa12.78□□□□□ -0.36
PTPN5-201ENST00000358540 CRYBB3P26998 211 aa12.77□□□□□ -0.36
PTPN5-201ENST00000358540 TECRQ9NZ01 308 aaKnown RBP12.77□□□□□ -0.36
PTPN5-201ENST00000358540 TRAV9-2A0A087WT02 112 aa12.77□□□□□ -0.37
PTPN5-201ENST00000358540 SUB1P53999 127 aaKnown RBP eCLIP12.77□□□□□ -0.37
PTPN5-201ENST00000358540 CX3CL1P78423 397 aa12.77□□□□□ -0.37
PTPN5-201ENST00000358540 PMCHL1Q16048 86 aa12.77□□□□□ -0.37
PTPN5-201ENST00000358540 MPV17L2Q567V2 206 aa12.77□□□□□ -0.37
PTPN5-201ENST00000358540 CACNG8Q8WXS5 425 aa12.77□□□□□ -0.37
PTPN5-201ENST00000358540 TNFRSF14Q92956 283 aa12.77□□□□□ -0.37
PTPN5-201ENST00000358540 TXNDC17Q9BRA2 123 aa12.77□□□□□ -0.37
PTPN5-201ENST00000358540 CHODLQ9H9P2 273 aa12.77□□□□□ -0.37
PTPN5-201ENST00000358540 SERTAD4Q9NUC0 356 aa12.77□□□□□ -0.37
PTPN5-201ENST00000358540 IGKV1D-37A0A075B6S9 117 aa12.77□□□□□ -0.37
PTPN5-201ENST00000358540 MT-ND6P03923 174 aa12.77□□□□□ -0.37
PTPN5-201ENST00000358540 PYYP10082 97 aa12.77□□□□□ -0.37
PTPN5-201ENST00000358540 GNLYP22749 145 aa12.77□□□□□ -0.37
PTPN5-201ENST00000358540 CSTL1Q9H114 145 aa12.77□□□□□ -0.37
PTPN5-201ENST00000358540 TMEM11P17152 192 aa12.76□□□□□ -0.37
PTPN5-201ENST00000358540 PPP1R27Q86WC6 154 aa12.76□□□□□ -0.37
PTPN5-201ENST00000358540 SSBP3Q9BWW4 388 aaPredicted RBP12.76□□□□□ -0.37
PTPN5-201ENST00000358540 COX7A2P2O60397 106 aa12.76□□□□□ -0.37
PTPN5-201ENST00000358540 ATP5IP56385 69 aaPredicted RBP12.76□□□□□ -0.37
PTPN5-201ENST00000358540 PQLC2Q6ZP29 291 aa12.76□□□□□ -0.37
PTPN5-201ENST00000358540 TEX45Q8NA69 505 aa12.76□□□□□ -0.37
PTPN5-201ENST00000358540 PRORYQ9H606 182 aa12.76□□□□□ -0.37
PTPN5-201ENST00000358540 OR2T8A6NH00 312 aa12.75□□□□□ -0.37
PTPN5-201ENST00000358540 GGTLC3B5MD39 225 aa12.75□□□□□ -0.37
PTPN5-201ENST00000358540 C19orf84I3L1E1 186 aa12.75□□□□□ -0.37
PTPN5-201ENST00000358540 HSBP1O75506 76 aa12.75□□□□□ -0.37
PTPN5-201ENST00000358540 ORM2P19652 201 aa12.75□□□□□ -0.37
PTPN5-201ENST00000358540 GNG4P50150 75 aa12.75□□□□□ -0.37
PTPN5-201ENST00000358540 APCSP02743 223 aa12.75□□□□□ -0.37
PTPN5-201ENST00000358540 CRYGBP07316 175 aa12.75□□□□□ -0.37
PTPN5-201ENST00000358540 ASPHD1Q5U4P2 390 aa12.75□□□□□ -0.37
PTPN5-201ENST00000358540 AMMECR1LQ6DCA0 310 aa12.75□□□□□ -0.37
PTPN5-201ENST00000358540 C8orf46Q8TAG6 207 aa12.75□□□□□ -0.37
PTPN5-201ENST00000358540 SLC25A2Q9BXI2 301 aa12.75□□□□□ -0.37
PTPN5-201ENST00000358540 ZNF355PQ9NSJ1 428 aa12.75□□□□□ -0.37
PTPN5-201ENST00000358540 INS-IGF2F8WCM5 200 aa12.75□□□□□ -0.37
PTPN5-201ENST00000358540 C8orf88P0DMB2 117 aa12.75□□□□□ -0.37
PTPN5-201ENST00000358540 UBE2L3P68036 154 aaKnown RBP12.75□□□□□ -0.37
PTPN5-201ENST00000358540 CENPWQ5EE01 88 aa12.75□□□□□ -0.37
PTPN5-201ENST00000358540 PATE2Q6UY27 113 aa12.75□□□□□ -0.37
PTPN5-201ENST00000358540 LY6G5BQ8NDX9 201 aa12.75□□□□□ -0.37
PTPN5-201ENST00000358540 NUDT11Q96G61 164 aa12.75□□□□□ -0.37
PTPN5-201ENST00000358540 PSMB11A5LHX3 300 aa12.74□□□□□ -0.37
PTPN5-201ENST00000358540 HELTA6NFD8 242 aa12.74□□□□□ -0.37
PTPN5-201ENST00000358540 M0R2Z0 102 aa12.74□□□□□ -0.37
PTPN5-201ENST00000358540 NUDT3O95989 172 aa12.74□□□□□ -0.37
PTPN5-201ENST00000358540 EBLN2Q6P2I7 272 aa12.74□□□□□ -0.37
PTPN5-201ENST00000358540 TCRBV4S1A1TA0A5B7 111 aa12.74□□□□□ -0.37
PTPN5-201ENST00000358540 HTR1DP28221 377 aa12.74□□□□□ -0.37
PTPN5-201ENST00000358540 HES1Q14469 280 aa12.74□□□□□ -0.37
PTPN5-201ENST00000358540 PRR27Q6MZM9 219 aa12.74□□□□□ -0.37
PTPN5-201ENST00000358540 SRSF12Q8WXF0 261 aaKnown RBP12.74□□□□□ -0.37
PTPN5-201ENST00000358540 FAM167A-AS1Q96KT0 104 aa12.74□□□□□ -0.37
PTPN5-201ENST00000358540 TMEM167BQ9NRX6 74 aa12.74□□□□□ -0.37
PTPN5-201ENST00000358540 TNFRSF19Q9NS68 423 aa12.74□□□□□ -0.37
PTPN5-201ENST00000358540 AMMECR1Q9Y4X0 333 aaPredicted RBP12.74□□□□□ -0.37
PTPN5-201ENST00000358540 LY6LH3BQJ8 138 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms