RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 LTBP4Q8N2S1 1624 aa10.58□□□□□ -0.72
SMC4-202ENST00000357388 GAGE12HA6NDE8 117 aa10.57□□□□□ -0.72
SMC4-202ENST00000357388 SPSB3Q6PJ21 355 aa10.57□□□□□ -0.72
SMC4-202ENST00000357388 CSTL1Q9H114 145 aa10.57□□□□□ -0.72
SMC4-202ENST00000357388 GAGE12JA6NER3 117 aa10.57□□□□□ -0.72
SMC4-202ENST00000357388 GAGE7O76087 117 aa10.57□□□□□ -0.72
SMC4-202ENST00000357388 IGHV2-70P01814 119 aa10.57□□□□□ -0.72
SMC4-202ENST00000357388 GAGE12FP0CL80 117 aa10.57□□□□□ -0.72
SMC4-202ENST00000357388 GAGE12GP0CL81 117 aa10.57□□□□□ -0.72
SMC4-202ENST00000357388 GAGE12IP0CL82 117 aa10.57□□□□□ -0.72
SMC4-202ENST00000357388 GAGE4Q13068 117 aa10.57□□□□□ -0.72
SMC4-202ENST00000357388 GLMPQ8WWB7 406 aa10.57□□□□□ -0.72
SMC4-202ENST00000357388 MBNL3Q9NUK0 354 aaKnown RBP10.57□□□□□ -0.72
SMC4-202ENST00000357388 LSM4Q9Y4Z0 139 aaKnown RBP10.57□□□□□ -0.72
SMC4-202ENST00000357388 ATG2BQ96BY7 2078 aa10.57□□□□□ -0.72
SMC4-202ENST00000357388 IGKV1-9A0A0C4DH69 117 aa10.57□□□□□ -0.72
SMC4-202ENST00000357388 A0A1B0GWJ7 208 aa10.57□□□□□ -0.72
SMC4-202ENST00000357388 RCHY1Q96PM5 261 aa10.57□□□□□ -0.72
SMC4-202ENST00000357388 CABIN1Q9Y6J0 2220 aa10.57□□□□□ -0.72
SMC4-202ENST00000357388 A0A0A6YYD4 124 aa10.57□□□□□ -0.72
SMC4-202ENST00000357388 DEFB121Q5J5C9 76 aa10.57□□□□□ -0.72
SMC4-202ENST00000357388 SPACA3Q8IXA5 215 aa10.57□□□□□ -0.72
SMC4-202ENST00000357388 LYZL4Q96KX0 146 aa10.56□□□□□ -0.72
SMC4-202ENST00000357388 SAP30O75446 220 aa10.56□□□□□ -0.72
SMC4-202ENST00000357388 EFNA4P52798 201 aa10.56□□□□□ -0.72
SMC4-202ENST00000357388 POU2AF1Q16633 256 aa10.56□□□□□ -0.72
SMC4-202ENST00000357388 C6orf226Q5I0X4 101 aa10.56□□□□□ -0.72
SMC4-202ENST00000357388 IGKV2-40A0A087WW87 121 aaPredicted RBP10.56□□□□□ -0.72
SMC4-202ENST00000357388 IGKV2D-40P01614 121 aaPredicted RBP10.56□□□□□ -0.72
SMC4-202ENST00000357388 IGLC2P0DOY2 106 aa10.56□□□□□ -0.72
SMC4-202ENST00000357388 IGLC3P0DOY3 106 aa10.56□□□□□ -0.72
SMC4-202ENST00000357388 SUPT4H1P63272 117 aaKnown RBP10.56□□□□□ -0.72
SMC4-202ENST00000357388 PRIMA1Q86XR5 153 aa10.56□□□□□ -0.72
SMC4-202ENST00000357388 GFI1Q99684 422 aa10.56□□□□□ -0.72
SMC4-202ENST00000357388 FOCADQ5VW36 1801 aa10.56□□□□□ -0.72
SMC4-202ENST00000357388 SIVA1O15304 175 aa10.56□□□□□ -0.72
SMC4-202ENST00000357388 PSCAO43653 123 aa10.56□□□□□ -0.72
SMC4-202ENST00000357388 NDUFC2O95298 119 aa10.56□□□□□ -0.72
SMC4-202ENST00000357388 MRPL14Q6P1L8 145 aaKnown RBP10.56□□□□□ -0.72
SMC4-202ENST00000357388 TMEM126AQ9H061 195 aa10.55□□□□□ -0.72
SMC4-202ENST00000357388 MIA3Q5JRA6 1907 aa10.55□□□□□ -0.72
SMC4-202ENST00000357388 QSER1Q2KHR3 1735 aa10.55□□□□□ -0.72
SMC4-202ENST00000357388 SHANK3Q9BYB0 1731 aa10.55□□□□□ -0.72
SMC4-202ENST00000357388 SEC16AO15027 2179 aa10.55□□□□□ -0.72
SMC4-202ENST00000357388 OOSP1A8MZH6 123 aa10.55□□□□□ -0.72
SMC4-202ENST00000357388 PMS2P5A8MQ11 134 aa10.55□□□□□ -0.72
SMC4-202ENST00000357388 INS-IGF2F8WCM5 200 aa10.55□□□□□ -0.72
SMC4-202ENST00000357388 INSP01308 110 aa10.55□□□□□ -0.72
SMC4-202ENST00000357388 CTSBP07858 339 aa10.55□□□□□ -0.72
SMC4-202ENST00000357388 HOXD3P31249 432 aaPredicted RBP10.55□□□□□ -0.72
SMC4-202ENST00000357388 TRBV6-6A0A0A6YYG2 114 aa10.55□□□□□ -0.72
SMC4-202ENST00000357388 TRAV40A0A0B4J280 105 aa10.55□□□□□ -0.72
SMC4-202ENST00000357388 B4DSR2 109 aa10.55□□□□□ -0.72
SMC4-202ENST00000357388 C3orf36Q3SXR2 165 aa10.55□□□□□ -0.72
SMC4-202ENST00000357388 C1QTNF4Q9BXJ3 329 aa10.55□□□□□ -0.72
SMC4-202ENST00000357388 RNF114Q9Y508 228 aa10.55□□□□□ -0.72
SMC4-202ENST00000357388 STRCQ7RTU9 1775 aa10.55□□□□□ -0.72
SMC4-202ENST00000357388 TMEM105Q8N8V8 129 aa10.54□□□□□ -0.72
SMC4-202ENST00000357388 NUP214P35658 2090 aaPredicted RBP10.54□□□□□ -0.72
SMC4-202ENST00000357388 IGHV3OR16-8A0A075B7F1 116 aa10.54□□□□□ -0.72
SMC4-202ENST00000357388 IGLV3-32A0A0A0MS00 114 aa10.54□□□□□ -0.72
SMC4-202ENST00000357388 TRAV41A0A0B4J266 112 aa10.54□□□□□ -0.72
SMC4-202ENST00000357388 COX8AP10176 69 aa10.54□□□□□ -0.72
SMC4-202ENST00000357388 CCL3L1P16619 93 aa10.54□□□□□ -0.72
SMC4-202ENST00000357388 CD33P20138 364 aa10.54□□□□□ -0.72
SMC4-202ENST00000357388 RFNGQ9Y644 331 aa10.54□□□□□ -0.72
SMC4-202ENST00000357388 A0A1W2PPM0 123 aa10.54□□□□□ -0.72
SMC4-202ENST00000357388 GAGE5Q13069 117 aa10.54□□□□□ -0.72
SMC4-202ENST00000357388 GAGE6Q13070 117 aa10.54□□□□□ -0.72
SMC4-202ENST00000357388 IGHG4P01861 327 aa10.54□□□□□ -0.72
SMC4-202ENST00000357388 SCRT1Q9BWW7 348 aa10.54□□□□□ -0.72
SMC4-202ENST00000357388 MARF1Q9Y4F3 1742 aaKnown RBP10.53□□□□□ -0.72
SMC4-202ENST00000357388 TCF15Q12870 199 aa10.53□□□□□ -0.72
SMC4-202ENST00000357388 PDE6HQ13956 83 aa10.53□□□□□ -0.72
SMC4-202ENST00000357388 SS18Q15532 418 aa10.53□□□□□ -0.72
SMC4-202ENST00000357388 LGALS9BQ3B8N2 356 aa10.53□□□□□ -0.72
SMC4-202ENST00000357388 LGALS9CQ6DKI2 356 aa10.53□□□□□ -0.72
SMC4-202ENST00000357388 Q86TA4 180 aa10.53□□□□□ -0.72
SMC4-202ENST00000357388 TRPT1Q86TN4 253 aaKnown RBP10.53□□□□□ -0.72
SMC4-202ENST00000357388 ZNF329Q86UD4 541 aa10.53□□□□□ -0.72
SMC4-202ENST00000357388 ZNF625Q96I27 306 aaPredicted RBP10.53□□□□□ -0.72
SMC4-202ENST00000357388 ADCYAP1P18509 176 aa10.53□□□□□ -0.72
SMC4-202ENST00000357388 LY6DQ14210 128 aa10.53□□□□□ -0.72
SMC4-202ENST00000357388 NABP1Q96AH0 204 aa10.53□□□□□ -0.72
SMC4-202ENST00000357388 IGKV1D-8A0A087WSZ0 117 aa10.53□□□□□ -0.72
SMC4-202ENST00000357388 CDKN1BP46527 198 aa10.53□□□□□ -0.72
SMC4-202ENST00000357388 LYPD3O95274 346 aa10.53□□□□□ -0.72
SMC4-202ENST00000357388 NPSP0C0P6 89 aa10.53□□□□□ -0.72
SMC4-202ENST00000357388 CFHR1Q03591 330 aa10.53□□□□□ -0.72
SMC4-202ENST00000357388 Q6ZS49 121 aa10.53□□□□□ -0.72
SMC4-202ENST00000357388 BMPERQ8N8U9 685 aa10.53□□□□□ -0.72
SMC4-202ENST00000357388 RNF166Q96A37 237 aaPredicted RBP10.53□□□□□ -0.72
SMC4-202ENST00000357388 SRSF8Q9BRL6 282 aaKnown RBP10.53□□□□□ -0.72
SMC4-202ENST00000357388 IGLV3-12A0A075B6K2 115 aa10.52□□□□□ -0.72
SMC4-202ENST00000357388 IGHV2-26A0A0B4J1V2 119 aa10.52□□□□□ -0.72
SMC4-202ENST00000357388 MINOS1Q5TGZ0 78 aa10.52□□□□□ -0.72
SMC4-202ENST00000357388 EXOC3-AS1Q8N2X6 119 aa10.52□□□□□ -0.72
SMC4-202ENST00000357388 Q8N8P6 123 aa10.52□□□□□ -0.72
SMC4-202ENST00000357388 RPUSD1Q9UJJ7 312 aaKnown RBP10.52□□□□□ -0.72
SMC4-202ENST00000357388 MINOS1-NBL1R4GNA1 71 aa10.52□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms