RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 TPTE2P1Q5T6R2 138 aa9.66□□□□□ -0.86
COL9A1-202ENST00000357250 OR13C6PQ8NH95 151 aa9.66□□□□□ -0.86
COL9A1-202ENST00000357250 COQ2Q96H96 371 aa9.66□□□□□ -0.86
COL9A1-202ENST00000357250 REG4Q9BYZ8 158 aa9.66□□□□□ -0.86
COL9A1-202ENST00000357250 PSMB11A5LHX3 300 aa9.66□□□□□ -0.86
COL9A1-202ENST00000357250 TMEM262E9PQX1 116 aa9.66□□□□□ -0.86
COL9A1-202ENST00000357250 CD7P09564 240 aa9.66□□□□□ -0.86
COL9A1-202ENST00000357250 LDLRAD2Q5SZI1 272 aa9.66□□□□□ -0.86
COL9A1-202ENST00000357250 CD177Q8N6Q3 437 aa9.66□□□□□ -0.86
COL9A1-202ENST00000357250 NUDT10Q8NFP7 164 aa9.66□□□□□ -0.86
COL9A1-202ENST00000357250 OR5A1Q8NGJ0 315 aa9.66□□□□□ -0.86
COL9A1-202ENST00000357250 OR9G4Q8NGQ1 327 aa9.66□□□□□ -0.86
COL9A1-202ENST00000357250 NUDT11Q96G61 164 aa9.66□□□□□ -0.86
COL9A1-202ENST00000357250 VSIRQ9H7M9 311 aa9.66□□□□□ -0.86
COL9A1-202ENST00000357250 TMEM200BQ69YZ2 307 aa9.66□□□□□ -0.86
COL9A1-202ENST00000357250 C9orf139Q6ZV77 190 aa9.66□□□□□ -0.86
COL9A1-202ENST00000357250 TRAV41A0A0B4J266 112 aa9.65□□□□□ -0.86
COL9A1-202ENST00000357250 IGHV1-3A0A0C4DH29 117 aa9.65□□□□□ -0.86
COL9A1-202ENST00000357250 RBMY1BA6NDE4 496 aaKnown RBP9.65□□□□□ -0.86
COL9A1-202ENST00000357250 RBMY1EA6NEQ0 496 aaKnown RBP9.65□□□□□ -0.86
COL9A1-202ENST00000357250 TYMSP04818 313 aa9.65□□□□□ -0.86
COL9A1-202ENST00000357250 RBMY1DP0C7P1 496 aaKnown RBP9.65□□□□□ -0.86
COL9A1-202ENST00000357250 RBMY1A1P0DJD3 496 aaKnown RBP9.65□□□□□ -0.86
COL9A1-202ENST00000357250 RBMY1CP0DJD4 496 aa9.65□□□□□ -0.86
COL9A1-202ENST00000357250 ZCCHC24Q8N2G6 241 aaKnown RBP9.65□□□□□ -0.86
COL9A1-202ENST00000357250 IFI27L1Q96BM0 104 aa9.65□□□□□ -0.86
COL9A1-202ENST00000357250 GTF3C1Q12789 2109 aa9.65□□□□□ -0.86
COL9A1-202ENST00000357250 TNFSF13O75888 250 aa9.65□□□□□ -0.86
COL9A1-202ENST00000357250 C3orf36Q3SXR2 165 aa9.65□□□□□ -0.86
COL9A1-202ENST00000357250 NCOR2Q9Y618 2525 aa9.65□□□□□ -0.86
COL9A1-202ENST00000357250 MRPL52Q86TS9 123 aaKnown RBP9.65□□□□□ -0.87
COL9A1-202ENST00000357250 MGST2Q99735 147 aa9.65□□□□□ -0.87
COL9A1-202ENST00000357250 A0A1B0GV72 72 aa9.64□□□□□ -0.87
COL9A1-202ENST00000357250 IGHV3-11P01762 117 aa9.64□□□□□ -0.87
COL9A1-202ENST00000357250 TCRAP04437 139 aa9.64□□□□□ -0.87
COL9A1-202ENST00000357250 SIGLEC15Q6ZMC9 328 aa9.64□□□□□ -0.87
COL9A1-202ENST00000357250 Q6ZS92 163 aa9.64□□□□□ -0.87
COL9A1-202ENST00000357250 SLC25A39Q9BZJ4 359 aaPredicted RBP9.64□□□□□ -0.87
COL9A1-202ENST00000357250 BEX4Q9NWD9 120 aaPredicted RBP9.64□□□□□ -0.87
COL9A1-202ENST00000357250 MRPL27Q9P0M9 148 aaKnown RBP9.64□□□□□ -0.87
COL9A1-202ENST00000357250 LINC00587B1AMM8 73 aa9.64□□□□□ -0.87
COL9A1-202ENST00000357250 H0YJW9 148 aa9.64□□□□□ -0.87
COL9A1-202ENST00000357250 EMP1P54849 157 aa9.64□□□□□ -0.87
COL9A1-202ENST00000357250 HSD52Q0P140 79 aa9.64□□□□□ -0.87
COL9A1-202ENST00000357250 C21orf62-AS1Q17RA5 79 aa9.64□□□□□ -0.87
COL9A1-202ENST00000357250 SSBP4Q9BWG4 385 aaPredicted RBP9.64□□□□□ -0.87
COL9A1-202ENST00000357250 TRGV2A0A075B6R0 118 aa9.64□□□□□ -0.87
COL9A1-202ENST00000357250 PSG1P11464 419 aa9.64□□□□□ -0.87
COL9A1-202ENST00000357250 ARL6IP6Q8N6S5 226 aa9.64□□□□□ -0.87
COL9A1-202ENST00000357250 OR10W1Q8NGF6 305 aa9.64□□□□□ -0.87
COL9A1-202ENST00000357250 TRBV7-1A0A0A6YYK4 115 aa9.63□□□□□ -0.87
COL9A1-202ENST00000357250 FHL1Q13642 323 aa9.63□□□□□ -0.87
COL9A1-202ENST00000357250 C5orf64Q2M2E5 130 aa9.63□□□□□ -0.87
COL9A1-202ENST00000357250 ANAPC10Q9UM13 185 aa9.63□□□□□ -0.87
COL9A1-202ENST00000357250 PIEZO1Q92508 2521 aa9.63□□□□□ -0.87
COL9A1-202ENST00000357250 PLNP26678 52 aa9.63□□□□□ -0.87
COL9A1-202ENST00000357250 STHQ8IWL8 128 aa9.63□□□□□ -0.87
COL9A1-202ENST00000357250 RNF182Q8N6D2 247 aa9.63□□□□□ -0.87
COL9A1-202ENST00000357250 ORAOV1Q8WV07 137 aa9.63□□□□□ -0.87
COL9A1-202ENST00000357250 IGKCP01834 107 aa9.63□□□□□ -0.87
COL9A1-202ENST00000357250 ERVK11-1P61568 191 aa9.63□□□□□ -0.87
COL9A1-202ENST00000357250 IGKV3OR2-268A0A0C4DH90 116 aa9.63□□□□□ -0.87
COL9A1-202ENST00000357250 AMBPP02760 352 aa9.63□□□□□ -0.87
COL9A1-202ENST00000357250 TMEM155Q4W5P6 130 aa9.63□□□□□ -0.87
COL9A1-202ENST00000357250 CFAP161Q6P656 301 aa9.63□□□□□ -0.87
COL9A1-202ENST00000357250 USMG5Q96IX5 58 aa9.63□□□□□ -0.87
COL9A1-202ENST00000357250 GAFA1Q96PS6 74 aa9.63□□□□□ -0.87
COL9A1-202ENST00000357250 NDUFA3O95167 84 aa9.62□□□□□ -0.87
COL9A1-202ENST00000357250 CXCL1P09341 107 aa9.62□□□□□ -0.87
COL9A1-202ENST00000357250 LINC00477Q96M19 166 aa9.62□□□□□ -0.87
COL9A1-202ENST00000357250 MUC21A0A0G2JKD1 596 aa9.62□□□□□ -0.87
COL9A1-202ENST00000357250 LY6G6EA0A0G2JKS1 128 aa9.62□□□□□ -0.87
COL9A1-202ENST00000357250 MUC21A0A140T8X8 626 aa9.62□□□□□ -0.87
COL9A1-202ENST00000357250 MUC21Q5SSG8 566 aa9.62□□□□□ -0.87
COL9A1-202ENST00000357250 VMO1Q7Z5L0 202 aa9.62□□□□□ -0.87
COL9A1-202ENST00000357250 U3KQA8 63 aa9.62□□□□□ -0.87
COL9A1-202ENST00000357250 C15orf62A8K5M9 175 aa9.62□□□□□ -0.87
COL9A1-202ENST00000357250 PCP4P48539 62 aa9.62□□□□□ -0.87
COL9A1-202ENST00000357250 ZNF138P52744 262 aa9.62□□□□□ -0.87
COL9A1-202ENST00000357250 PRB3Q04118 309 aaPredicted RBP9.62□□□□□ -0.87
COL9A1-202ENST00000357250 PDE6HQ13956 83 aa9.62□□□□□ -0.87
COL9A1-202ENST00000357250 ACTL10Q5JWF8 245 aa9.62□□□□□ -0.87
COL9A1-202ENST00000357250 DMRTA1Q5VZB9 504 aa9.62□□□□□ -0.87
COL9A1-202ENST00000357250 BEND2Q8NDZ0 799 aa9.62□□□□□ -0.87
COL9A1-202ENST00000357250 APOMO95445 188 aa9.62□□□□□ -0.87
COL9A1-202ENST00000357250 LMO1P25800 156 aa9.62□□□□□ -0.87
COL9A1-202ENST00000357250 C5orf24Q7Z6I8 188 aa9.62□□□□□ -0.87
COL9A1-202ENST00000357250 ST6GALNAC6Q969X2 333 aa9.62□□□□□ -0.87
COL9A1-202ENST00000357250 IGF2RP11717 2491 aa9.61□□□□□ -0.87
COL9A1-202ENST00000357250 IGHV3OR16-8A0A075B7F1 116 aa9.61□□□□□ -0.87
COL9A1-202ENST00000357250 PMS2P5A8MQ11 134 aa9.61□□□□□ -0.87
COL9A1-202ENST00000357250 C15orf32Q32M92 178 aa9.61□□□□□ -0.87
COL9A1-202ENST00000357250 ZNF585BQ52M93 769 aa9.61□□□□□ -0.87
COL9A1-202ENST00000357250 SEPSECSQ9HD40 501 aaKnown RBP9.61□□□□□ -0.87
COL9A1-202ENST00000357250 CHTOPQ9Y3Y2 248 aaKnown RBP9.61□□□□□ -0.87
COL9A1-202ENST00000357250 PLCE1Q9P212 2302 aa9.61□□□□□ -0.87
COL9A1-202ENST00000357250 PRR14LQ5THK1 2151 aa9.61□□□□□ -0.87
COL9A1-202ENST00000357250 OTOGLQ3ZCN5 2332 aa9.61□□□□□ -0.87
COL9A1-202ENST00000357250 E9PQ18 207 aa9.61□□□□□ -0.87
COL9A1-202ENST00000357250 MLNRO43193 412 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms