RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 ZNF137PP52743 207 aa6.68□□□□□ -1.34
CDC42SE1-201ENST00000357235 HERV-K104P63124 156 aa6.68□□□□□ -1.34
CDC42SE1-201ENST00000357235 C10orf55Q5SWW7 151 aa6.68□□□□□ -1.34
CDC42SE1-201ENST00000357235 ADAMTSL5Q6ZMM2 481 aa6.68□□□□□ -1.34
CDC42SE1-201ENST00000357235 C2orf91Q6ZV80 131 aa6.68□□□□□ -1.34
CDC42SE1-201ENST00000357235 SPRY4Q9C004 299 aa6.68□□□□□ -1.34
CDC42SE1-201ENST00000357235 PRNDQ9UKY0 176 aa6.68□□□□□ -1.34
CDC42SE1-201ENST00000357235 CACNA1HO95180 2353 aa6.68□□□□□ -1.34
CDC42SE1-201ENST00000357235 HIGD1CA8MV81 97 aa6.68□□□□□ -1.34
CDC42SE1-201ENST00000357235 SAA1P0DJI8 122 aaPredicted RBP6.68□□□□□ -1.34
CDC42SE1-201ENST00000357235 RTL8BQ17RB0 113 aa6.68□□□□□ -1.34
CDC42SE1-201ENST00000357235 C17orf58Q2M2W7 97 aa6.68□□□□□ -1.34
CDC42SE1-201ENST00000357235 RBMXL3Q8N7X1 1067 aaKnown RBP6.68□□□□□ -1.34
CDC42SE1-201ENST00000357235 DDB2Q92466 427 aa6.68□□□□□ -1.34
CDC42SE1-201ENST00000357235 NPIPB3Q92617 1050 aa6.68□□□□□ -1.34
CDC42SE1-201ENST00000357235 HARBI1Q96MB7 349 aa6.68□□□□□ -1.34
CDC42SE1-201ENST00000357235 SLC25A33Q9BSK2 321 aa6.68□□□□□ -1.34
CDC42SE1-201ENST00000357235 MGAQ8IWI9 3026 aa6.67□□□□□ -1.34
CDC42SE1-201ENST00000357235 KBTBD11-OT1A0A1B0GTJ5 212 aa6.67□□□□□ -1.34
CDC42SE1-201ENST00000357235 TEX50A0A1B0GTY4 177 aa6.67□□□□□ -1.34
CDC42SE1-201ENST00000357235 IZUMO1RA6ND01 250 aa6.67□□□□□ -1.34
CDC42SE1-201ENST00000357235 NKX2-8O15522 239 aa6.67□□□□□ -1.34
CDC42SE1-201ENST00000357235 IGLV2-8P01709 118 aa6.67□□□□□ -1.34
CDC42SE1-201ENST00000357235 CLEC3BP05452 202 aa6.67□□□□□ -1.34
CDC42SE1-201ENST00000357235 FAM162BQ5T6X4 162 aa6.67□□□□□ -1.34
CDC42SE1-201ENST00000357235 NUP35Q8NFH5 326 aa6.67□□□□□ -1.34
CDC42SE1-201ENST00000357235 PAXXQ9BUH6 204 aa6.67□□□□□ -1.34
CDC42SE1-201ENST00000357235 PRCDQ00LT1 54 aa6.67□□□□□ -1.34
CDC42SE1-201ENST00000357235 MZT1Q08AG7 82 aa6.67□□□□□ -1.34
CDC42SE1-201ENST00000357235 KLF5Q13887 457 aaPredicted RBP6.67□□□□□ -1.34
CDC42SE1-201ENST00000357235 ZCCHC24Q8N2G6 241 aaKnown RBP6.67□□□□□ -1.34
CDC42SE1-201ENST00000357235 FDCSPQ8NFU4 85 aa6.67□□□□□ -1.34
CDC42SE1-201ENST00000357235 MAP1LC3CQ9BXW4 147 aa6.67□□□□□ -1.34
CDC42SE1-201ENST00000357235 SLC25A10Q9UBX3 287 aaPredicted RBP6.67□□□□□ -1.34
CDC42SE1-201ENST00000357235 SPTBN2O15020 2390 aa6.66□□□□□ -1.34
CDC42SE1-201ENST00000357235 SLC25A5P05141 298 aaKnown RBP6.66□□□□□ -1.34
CDC42SE1-201ENST00000357235 SP9P0CG40 484 aa6.66□□□□□ -1.34
CDC42SE1-201ENST00000357235 PTPRZ1P23471 2315 aaPredicted RBP6.66□□□□□ -1.34
CDC42SE1-201ENST00000357235 C10orf113Q5VZT2 155 aa6.66□□□□□ -1.34
CDC42SE1-201ENST00000357235 FOXI2Q6ZQN5 318 aa6.66□□□□□ -1.34
CDC42SE1-201ENST00000357235 LINC00173Q6ZV60 143 aa6.66□□□□□ -1.34
CDC42SE1-201ENST00000357235 SSX8Q7RTT4 187 aa6.66□□□□□ -1.34
CDC42SE1-201ENST00000357235 NEU4Q8WWR8 484 aaPredicted RBP6.66□□□□□ -1.34
CDC42SE1-201ENST00000357235 C19orf24Q9BVV8 132 aa6.66□□□□□ -1.34
CDC42SE1-201ENST00000357235 PROCRQ9UNN8 238 aa6.66□□□□□ -1.34
CDC42SE1-201ENST00000357235 TRBV7-9A0A0J9YWB2 115 aa6.66□□□□□ -1.34
CDC42SE1-201ENST00000357235 A0A1W2PRE2 83 aa6.66□□□□□ -1.34
CDC42SE1-201ENST00000357235 SMIM27A0A1W2PRY6 76 aa6.66□□□□□ -1.34
CDC42SE1-201ENST00000357235 E7EUB6 86 aa6.66□□□□□ -1.34
CDC42SE1-201ENST00000357235 UPK2O00526 184 aa6.66□□□□□ -1.34
CDC42SE1-201ENST00000357235 MOSP00540 346 aa6.66□□□□□ -1.34
CDC42SE1-201ENST00000357235 CSN3P07498 182 aa6.66□□□□□ -1.34
CDC42SE1-201ENST00000357235 CT45A6P0DMU7 189 aa6.66□□□□□ -1.34
CDC42SE1-201ENST00000357235 CT45A5P0DMU8 189 aa6.66□□□□□ -1.34
CDC42SE1-201ENST00000357235 CT45A7P0DMV0 189 aa6.66□□□□□ -1.34
CDC42SE1-201ENST00000357235 CCL8P80075 99 aa6.66□□□□□ -1.34
CDC42SE1-201ENST00000357235 ERHP84090 104 aaKnown RBP6.66□□□□□ -1.34
CDC42SE1-201ENST00000357235 FOXE3Q13461 319 aa6.66□□□□□ -1.34
CDC42SE1-201ENST00000357235 SAMD5Q5TGI4 173 aa6.66□□□□□ -1.34
CDC42SE1-201ENST00000357235 GDF5OSQ5U4N7 250 aa6.66□□□□□ -1.34
CDC42SE1-201ENST00000357235 PSG8Q9UQ74 426 aa6.66□□□□□ -1.34
CDC42SE1-201ENST00000357235 DSCAMO60469 2012 aa6.66□□□□□ -1.34
CDC42SE1-201ENST00000357235 TANC2Q9HCD6 1990 aa6.66□□□□□ -1.34
CDC42SE1-201ENST00000357235 GATA3P23771 443 aa6.66□□□□□ -1.34
CDC42SE1-201ENST00000357235 PEAR1Q5VY43 1037 aaPredicted RBP6.66□□□□□ -1.34
CDC42SE1-201ENST00000357235 SLC25A2Q9BXI2 301 aa6.66□□□□□ -1.34
CDC42SE1-201ENST00000357235 PEX7O00628 323 aa6.65□□□□□ -1.34
CDC42SE1-201ENST00000357235 RNASE2P10153 161 aaKnown RBP6.65□□□□□ -1.34
CDC42SE1-201ENST00000357235 ZNF138P52744 262 aa6.65□□□□□ -1.34
CDC42SE1-201ENST00000357235 PRB3Q04118 309 aaPredicted RBP6.65□□□□□ -1.34
CDC42SE1-201ENST00000357235 CD69Q07108 199 aa6.65□□□□□ -1.34
CDC42SE1-201ENST00000357235 HCP5Q6MZN7 132 aa6.65□□□□□ -1.34
CDC42SE1-201ENST00000357235 RASL11AQ6T310 242 aa6.65□□□□□ -1.34
CDC42SE1-201ENST00000357235 LINC00305Q7Z4B0 112 aa6.65□□□□□ -1.34
CDC42SE1-201ENST00000357235 ZNF418Q8TF45 676 aaPredicted RBP6.65□□□□□ -1.34
CDC42SE1-201ENST00000357235 CACNG8Q8WXS5 425 aa6.65□□□□□ -1.34
CDC42SE1-201ENST00000357235 H1FXQ92522 213 aaKnown RBP6.65□□□□□ -1.34
CDC42SE1-201ENST00000357235 PGLYRP4Q96LB8 373 aa6.65□□□□□ -1.34
CDC42SE1-201ENST00000357235 IGF2BP2-AS1Q96M15 143 aa6.65□□□□□ -1.34
CDC42SE1-201ENST00000357235 MRPL20Q9BYC9 149 aaKnown RBP6.65□□□□□ -1.34
CDC42SE1-201ENST00000357235 MUC6Q6W4X9 2439 aa6.65□□□□□ -1.35
CDC42SE1-201ENST00000357235 IGHV3-72A0A0B4J1Y9 119 aa6.65□□□□□ -1.35
CDC42SE1-201ENST00000357235 PGPA6NDG6 321 aa6.65□□□□□ -1.35
CDC42SE1-201ENST00000357235 J3KRW8 73 aa6.65□□□□□ -1.35
CDC42SE1-201ENST00000357235 ENSAO43768 121 aaKnown RBP6.65□□□□□ -1.35
CDC42SE1-201ENST00000357235 CCL3L1P16619 93 aa6.65□□□□□ -1.35
CDC42SE1-201ENST00000357235 TCTAP57738 103 aa6.65□□□□□ -1.35
CDC42SE1-201ENST00000357235 TNFAIP6P98066 277 aaPredicted RBP6.65□□□□□ -1.35
CDC42SE1-201ENST00000357235 TIMM23BQ5SRD1 257 aa6.65□□□□□ -1.35
CDC42SE1-201ENST00000357235 FAM120AOSQ5T036 256 aa6.65□□□□□ -1.35
CDC42SE1-201ENST00000357235 MBNL2Q5VZF2 373 aaKnown RBP6.65□□□□□ -1.35
CDC42SE1-201ENST00000357235 ADTRPQ96IZ2 230 aa6.65□□□□□ -1.35
CDC42SE1-201ENST00000357235 SPAG8Q99932 426 aaPredicted RBP6.65□□□□□ -1.35
CDC42SE1-201ENST00000357235 RABAC1Q9UI14 185 aa6.65□□□□□ -1.35
CDC42SE1-201ENST00000357235 ATMQ13315 3056 aa6.65□□□□□ -1.35
CDC42SE1-201ENST00000357235 DYSFO75923 2080 aa6.64□□□□□ -1.35
CDC42SE1-201ENST00000357235 IGHV1-24A0A0C4DH33 117 aa6.64□□□□□ -1.35
CDC42SE1-201ENST00000357235 CNIH1O95406 144 aa6.64□□□□□ -1.35
CDC42SE1-201ENST00000357235 ATP5G2Q06055 141 aa6.64□□□□□ -1.35
CDC42SE1-201ENST00000357235 RNF183Q96D59 192 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms