RNA–Protein interactions for RNA: ENST00000357207.8

TRAPPC11-202, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,435 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-202ENST00000357207 TNFRSF14Q92956 283 aa12.79□□□□□ -0.36
TRAPPC11-202ENST00000357207 ZNF479Q96JC4 524 aa12.79□□□□□ -0.36
TRAPPC11-202ENST00000357207 PLSCR4Q9NRQ2 329 aa12.79□□□□□ -0.36
TRAPPC11-202ENST00000357207 KLF2Q9Y5W3 355 aaPredicted RBP12.79□□□□□ -0.36
TRAPPC11-202ENST00000357207 A0A087X0K7 114 aa12.79□□□□□ -0.36
TRAPPC11-202ENST00000357207 GUSBP1Q15486 140 aa12.79□□□□□ -0.36
TRAPPC11-202ENST00000357207 MLANAQ16655 118 aa12.79□□□□□ -0.36
TRAPPC11-202ENST00000357207 RSPO1Q2MKA7 263 aaPredicted RBP12.79□□□□□ -0.36
TRAPPC11-202ENST00000357207 LINC00479Q96M42 142 aa12.79□□□□□ -0.36
TRAPPC11-202ENST00000357207 TRGV9Q99603 122 aa12.79□□□□□ -0.36
TRAPPC11-202ENST00000357207 SCRT1Q9BWW7 348 aa12.79□□□□□ -0.36
TRAPPC11-202ENST00000357207 SAMD5Q5TGI4 173 aa12.79□□□□□ -0.36
TRAPPC11-202ENST00000357207 IGHV3OR16-10A0A075B7F0 116 aa12.78□□□□□ -0.36
TRAPPC11-202ENST00000357207 FNDC10F2Z333 226 aa12.78□□□□□ -0.36
TRAPPC11-202ENST00000357207 H7C1H1 209 aa12.78□□□□□ -0.36
TRAPPC11-202ENST00000357207 IGKCP01834 107 aa12.78□□□□□ -0.36
TRAPPC11-202ENST00000357207 LYPD6BQ8NI32 183 aa12.78□□□□□ -0.36
TRAPPC11-202ENST00000357207 IGHV3OR16-12A0A075B7B8 117 aa12.78□□□□□ -0.36
TRAPPC11-202ENST00000357207 D6R8Y8 96 aa12.78□□□□□ -0.36
TRAPPC11-202ENST00000357207 F2Z2F3 143 aa12.78□□□□□ -0.36
TRAPPC11-202ENST00000357207 TIMM23O14925 209 aa12.78□□□□□ -0.36
TRAPPC11-202ENST00000357207 TMEM105Q8N8V8 129 aa12.78□□□□□ -0.36
TRAPPC11-202ENST00000357207 SLC25A39Q9BZJ4 359 aaPredicted RBP12.78□□□□□ -0.36
TRAPPC11-202ENST00000357207 MRPS16Q9Y3D3 137 aaKnown RBP12.78□□□□□ -0.36
TRAPPC11-202ENST00000357207 SELENOKQ9Y6D0 94 aa12.78□□□□□ -0.36
TRAPPC11-202ENST00000357207 IGKV1-39P01597 117 aa12.78□□□□□ -0.36
TRAPPC11-202ENST00000357207 IGKV1D-39P04432 117 aa12.78□□□□□ -0.36
TRAPPC11-202ENST00000357207 SCGB1A1P11684 91 aa12.78□□□□□ -0.36
TRAPPC11-202ENST00000357207 TRAV8-1A0A0A6YYK1 113 aa12.78□□□□□ -0.36
TRAPPC11-202ENST00000357207 PRB4P10163 310 aaPredicted RBP12.78□□□□□ -0.36
TRAPPC11-202ENST00000357207 EVI2AP22794 236 aa12.78□□□□□ -0.36
TRAPPC11-202ENST00000357207 CDKN1AP38936 164 aa12.78□□□□□ -0.36
TRAPPC11-202ENST00000357207 RNASE6Q93091 150 aaKnown RBP12.78□□□□□ -0.36
TRAPPC11-202ENST00000357207 SIGMAR1Q99720 223 aa12.78□□□□□ -0.36
TRAPPC11-202ENST00000357207 IGKV1D-17A0A075B6S4 117 aa12.77□□□□□ -0.36
TRAPPC11-202ENST00000357207 RNASE2P10153 161 aaKnown RBP12.77□□□□□ -0.36
TRAPPC11-202ENST00000357207 ZNF138P52744 262 aa12.77□□□□□ -0.36
TRAPPC11-202ENST00000357207 MRAP2Q96G30 205 aa12.77□□□□□ -0.36
TRAPPC11-202ENST00000357207 RAX2Q96IS3 184 aa12.77□□□□□ -0.36
TRAPPC11-202ENST00000357207 A0A0G2JLM5 398 aa12.77□□□□□ -0.37
TRAPPC11-202ENST00000357207 TGFAP01135 160 aa12.77□□□□□ -0.37
TRAPPC11-202ENST00000357207 TMPRSS3P57727 454 aa12.77□□□□□ -0.37
TRAPPC11-202ENST00000357207 RPRMLQ8N4K4 120 aa12.77□□□□□ -0.37
TRAPPC11-202ENST00000357207 KIR3DL3Q8N743 410 aa12.77□□□□□ -0.37
TRAPPC11-202ENST00000357207 NEU4Q8WWR8 484 aaPredicted RBP12.77□□□□□ -0.37
TRAPPC11-202ENST00000357207 TMEM190Q8WZ59 177 aa12.77□□□□□ -0.37
TRAPPC11-202ENST00000357207 VCX2Q9H322 139 aa12.77□□□□□ -0.37
TRAPPC11-202ENST00000357207 SMPXQ9UHP9 88 aa12.77□□□□□ -0.37
TRAPPC11-202ENST00000357207 SUMO2P61956 95 aaKnown RBP12.77□□□□□ -0.37
TRAPPC11-202ENST00000357207 YLPM1P49750 1951 aaKnown RBP12.77□□□□□ -0.37
TRAPPC11-202ENST00000357207 ANAPC1Q9H1A4 1944 aa12.77□□□□□ -0.37
TRAPPC11-202ENST00000357207 A0A1B0GWJ7 208 aa12.76□□□□□ -0.37
TRAPPC11-202ENST00000357207 UBE2L6O14933 153 aa12.76□□□□□ -0.37
TRAPPC11-202ENST00000357207 YPEL3P61236 119 aaPredicted RBP12.76□□□□□ -0.37
TRAPPC11-202ENST00000357207 LYNX1G3V0Z9 82 aa12.76□□□□□ -0.37
TRAPPC11-202ENST00000357207 NCR2O95944 276 aa12.76□□□□□ -0.37
TRAPPC11-202ENST00000357207 LYNX1P0DP58 116 aa12.76□□□□□ -0.37
TRAPPC11-202ENST00000357207 ORMDL2Q53FV1 153 aa12.76□□□□□ -0.37
TRAPPC11-202ENST00000357207 LYZL1Q6UWQ5 148 aa12.76□□□□□ -0.37
TRAPPC11-202ENST00000357207 BCL6BQ8N143 479 aaPredicted RBP12.76□□□□□ -0.37
TRAPPC11-202ENST00000357207 FAM169BQ8N8A8 192 aa12.76□□□□□ -0.37
TRAPPC11-202ENST00000357207 JMJD8Q96S16 334 aa12.76□□□□□ -0.37
TRAPPC11-202ENST00000357207 LINC01559Q495D7 138 aa12.76□□□□□ -0.37
TRAPPC11-202ENST00000357207 TMEM200BQ69YZ2 307 aa12.76□□□□□ -0.37
TRAPPC11-202ENST00000357207 C18orf32Q8TCD1 76 aa12.76□□□□□ -0.37
TRAPPC11-202ENST00000357207 TNFRSF18Q9Y5U5 241 aa12.76□□□□□ -0.37
TRAPPC11-202ENST00000357207 COX11Q9Y6N1 276 aa12.76□□□□□ -0.37
TRAPPC11-202ENST00000357207 ABHD17AQ96GS6 310 aa12.75□□□□□ -0.37
TRAPPC11-202ENST00000357207 SLC25A15Q9Y619 301 aa12.75□□□□□ -0.37
TRAPPC11-202ENST00000357207 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.75□□□□□ -0.37
TRAPPC11-202ENST00000357207 HOXA3O43365 443 aaPredicted RBP12.75□□□□□ -0.37
TRAPPC11-202ENST00000357207 RNF166Q96A37 237 aaPredicted RBP12.75□□□□□ -0.37
TRAPPC11-202ENST00000357207 CYSLTR1Q9Y271 337 aa12.75□□□□□ -0.37
TRAPPC11-202ENST00000357207 H0YJW9 148 aa12.75□□□□□ -0.37
TRAPPC11-202ENST00000357207 CYYR1Q96J86 154 aa12.75□□□□□ -0.37
TRAPPC11-202ENST00000357207 NOTCH4Q99466 2003 aa12.74□□□□□ -0.37
TRAPPC11-202ENST00000357207 CD5LO43866 347 aa12.74□□□□□ -0.37
TRAPPC11-202ENST00000357207 DNAL4O96015 105 aa12.74□□□□□ -0.37
TRAPPC11-202ENST00000357207 RHOGP84095 191 aa12.74□□□□□ -0.37
TRAPPC11-202ENST00000357207 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.74□□□□□ -0.37
TRAPPC11-202ENST00000357207 PSMB11A5LHX3 300 aa12.74□□□□□ -0.37
TRAPPC11-202ENST00000357207 IGKV1-16P04430 117 aa12.74□□□□□ -0.37
TRAPPC11-202ENST00000357207 LMO1P25800 156 aa12.74□□□□□ -0.37
TRAPPC11-202ENST00000357207 RNASE4P34096 147 aaKnown RBP12.74□□□□□ -0.37
TRAPPC11-202ENST00000357207 PAX1P15863 534 aa12.74□□□□□ -0.37
TRAPPC11-202ENST00000357207 RRN3P1Q2M238 152 aa12.74□□□□□ -0.37
TRAPPC11-202ENST00000357207 MCRIP2Q9BUT9 160 aaKnown RBP12.74□□□□□ -0.37
TRAPPC11-202ENST00000357207 SLC25A2Q9BXI2 301 aa12.74□□□□□ -0.37
TRAPPC11-202ENST00000357207 IGLC2P0DOY2 106 aa12.74□□□□□ -0.37
TRAPPC11-202ENST00000357207 IGLC3P0DOY3 106 aa12.74□□□□□ -0.37
TRAPPC11-202ENST00000357207 IGHV1-8P0DP01 117 aa12.74□□□□□ -0.37
TRAPPC11-202ENST00000357207 GAGE13Q4V321 117 aa12.74□□□□□ -0.37
TRAPPC11-202ENST00000357207 Q6ZWC4 215 aa12.74□□□□□ -0.37
TRAPPC11-202ENST00000357207 TRAV21A0A0B4J279 112 aa12.73□□□□□ -0.37
TRAPPC11-202ENST00000357207 ZNF815PA8K554 130 aa12.73□□□□□ -0.37
TRAPPC11-202ENST00000357207 GTSCR1Q86UQ5 136 aa12.73□□□□□ -0.37
TRAPPC11-202ENST00000357207 HAPLN4Q86UW8 402 aa12.73□□□□□ -0.37
TRAPPC11-202ENST00000357207 PIMREGQ9BSJ6 248 aa12.73□□□□□ -0.37
TRAPPC11-202ENST00000357207 IGKV2-40A0A087WW87 121 aaPredicted RBP12.73□□□□□ -0.37
TRAPPC11-202ENST00000357207 GAGE12BA1L429 117 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms