RNA–Protein interactions for RNA: ENST00000356183.8

GTF3C1-201, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-201ENST00000356183 ANAPC10Q9UM13 185 aa9.12□□□□□ -0.95
GTF3C1-201ENST00000356183 ESPL1Q14674 2120 aa9.12□□□□□ -0.95
GTF3C1-201ENST00000356183 NRXN2Q9P2S2 1712 aa9.12□□□□□ -0.95
GTF3C1-201ENST00000356183 POLR3KQ9Y2Y1 108 aaPredicted RBP9.12□□□□□ -0.95
GTF3C1-201ENST00000356183 FGF11Q92914 225 aa9.12□□□□□ -0.95
GTF3C1-201ENST00000356183 MBNL3Q9NUK0 354 aaKnown RBP9.12□□□□□ -0.95
GTF3C1-201ENST00000356183 ARHGEF17Q96PE2 2063 aaPredicted RBP9.12□□□□□ -0.95
GTF3C1-201ENST00000356183 TRAV1-1A0A0B4J248 108 aa9.12□□□□□ -0.95
GTF3C1-201ENST00000356183 CD5LO43866 347 aa9.12□□□□□ -0.95
GTF3C1-201ENST00000356183 TIAF1O95411 115 aa9.12□□□□□ -0.95
GTF3C1-201ENST00000356183 PSG7Q13046 419 aa9.12□□□□□ -0.95
GTF3C1-201ENST00000356183 C7orf69Q9H7B7 122 aa9.12□□□□□ -0.95
GTF3C1-201ENST00000356183 IGFL4Q6B9Z1 124 aa9.11□□□□□ -0.95
GTF3C1-201ENST00000356183 UBE2DNLQ8IWF7 75 aa9.11□□□□□ -0.95
GTF3C1-201ENST00000356183 SLC25A45Q8N413 288 aa9.11□□□□□ -0.95
GTF3C1-201ENST00000356183 LINC00527Q9UJ94 153 aa9.11□□□□□ -0.95
GTF3C1-201ENST00000356183 TRAV40A0A0B4J280 105 aa9.11□□□□□ -0.95
GTF3C1-201ENST00000356183 YPEL1O60688 119 aa9.11□□□□□ -0.95
GTF3C1-201ENST00000356183 C1orf53Q5VUE5 145 aa9.11□□□□□ -0.95
GTF3C1-201ENST00000356183 YPEL2Q96QA6 119 aa9.11□□□□□ -0.95
GTF3C1-201ENST00000356183 TIMM21Q9BVV7 248 aa9.11□□□□□ -0.95
GTF3C1-201ENST00000356183 HOXD3P31249 432 aaPredicted RBP9.11□□□□□ -0.95
GTF3C1-201ENST00000356183 IQCF6A8MYZ5 107 aa9.11□□□□□ -0.95
GTF3C1-201ENST00000356183 MYOD1P15172 320 aa9.11□□□□□ -0.95
GTF3C1-201ENST00000356183 PAX8Q06710 450 aa9.11□□□□□ -0.95
GTF3C1-201ENST00000356183 STPG1Q5TH74 334 aa9.11□□□□□ -0.95
GTF3C1-201ENST00000356183 FAM168AQ92567 244 aa9.11□□□□□ -0.95
GTF3C1-201ENST00000356183 SLC25A39Q9BZJ4 359 aaPredicted RBP9.11□□□□□ -0.95
GTF3C1-201ENST00000356183 SS18L2Q9UHA2 77 aa9.11□□□□□ -0.95
GTF3C1-201ENST00000356183 LRRC37AA6NMS7 1700 aa9.11□□□□□ -0.95
GTF3C1-201ENST00000356183 OVOL1O14753 267 aa9.11□□□□□ -0.95
GTF3C1-201ENST00000356183 SRSF8Q9BRL6 282 aaKnown RBP9.11□□□□□ -0.95
GTF3C1-201ENST00000356183 TMEM126AQ9H061 195 aa9.11□□□□□ -0.95
GTF3C1-201ENST00000356183 TRAV12-1A0A0B4J245 112 aa9.1□□□□□ -0.95
GTF3C1-201ENST00000356183 NPSP0C0P6 89 aa9.1□□□□□ -0.95
GTF3C1-201ENST00000356183 C6orf226Q5I0X4 101 aa9.1□□□□□ -0.95
GTF3C1-201ENST00000356183 PAQR4Q8N4S7 273 aaPredicted RBP9.1□□□□□ -0.95
GTF3C1-201ENST00000356183 Q8TAT8 98 aa9.1□□□□□ -0.95
GTF3C1-201ENST00000356183 TGFBR3LH3BV60 316 aa9.1□□□□□ -0.95
GTF3C1-201ENST00000356183 NDPQ00604 133 aa9.1□□□□□ -0.95
GTF3C1-201ENST00000356183 PRCDQ00LT1 54 aa9.1□□□□□ -0.95
GTF3C1-201ENST00000356183 RASL11AQ6T310 242 aa9.1□□□□□ -0.95
GTF3C1-201ENST00000356183 GBF1Q92538 1859 aa9.1□□□□□ -0.95
GTF3C1-201ENST00000356183 IGLV3-21P80748 117 aaPredicted RBP9.1□□□□□ -0.95
GTF3C1-201ENST00000356183 ID3Q02535 119 aa9.1□□□□□ -0.95
GTF3C1-201ENST00000356183 TREML4Q6UXN2 200 aa9.1□□□□□ -0.95
GTF3C1-201ENST00000356183 LINC01551Q86U37 167 aa9.1□□□□□ -0.95
GTF3C1-201ENST00000356183 ABCA7Q8IZY2 2146 aa9.1□□□□□ -0.95
GTF3C1-201ENST00000356183 SOCS3O14543 225 aa9.1□□□□□ -0.95
GTF3C1-201ENST00000356183 RPL35AP18077 110 aaKnown RBP9.1□□□□□ -0.95
GTF3C1-201ENST00000356183 SSC4DQ8WTU2 575 aa9.1□□□□□ -0.95
GTF3C1-201ENST00000356183 ATP6V0BQ99437 205 aa9.1□□□□□ -0.95
GTF3C1-201ENST00000356183 IGKV1D-8A0A087WSZ0 117 aa9.1□□□□□ -0.95
GTF3C1-201ENST00000356183 LYPD3O95274 346 aa9.1□□□□□ -0.95
GTF3C1-201ENST00000356183 A0A087WWL8 130 aa9.09□□□□□ -0.95
GTF3C1-201ENST00000356183 SLC25A48Q6ZT89 311 aaKnown RBP9.09□□□□□ -0.95
GTF3C1-201ENST00000356183 C14orf178Q8N769 122 aaPredicted RBP9.09□□□□□ -0.95
GTF3C1-201ENST00000356183 FDCSPQ8NFU4 85 aa9.09□□□□□ -0.95
GTF3C1-201ENST00000356183 SNHG12Q9BXW3 62 aa9.09□□□□□ -0.95
GTF3C1-201ENST00000356183 TRGV1A0A0A0MS02 117 aa9.09□□□□□ -0.95
GTF3C1-201ENST00000356183 MYMXA0A1B0GTQ4 84 aa9.09□□□□□ -0.95
GTF3C1-201ENST00000356183 SUPT4H1P63272 117 aaKnown RBP9.09□□□□□ -0.95
GTF3C1-201ENST00000356183 MST1LQ2TV78 715 aa9.09□□□□□ -0.95
GTF3C1-201ENST00000356183 ANK1P16157 1881 aa9.09□□□□□ -0.95
GTF3C1-201ENST00000356183 IGHV2-5P01817 119 aa9.09□□□□□ -0.95
GTF3C1-201ENST00000356183 HAPLN4Q86UW8 402 aa9.09□□□□□ -0.95
GTF3C1-201ENST00000356183 LHFPL1Q86WI0 220 aa9.09□□□□□ -0.95
GTF3C1-201ENST00000356183 CHCHD2Q9Y6H1 151 aaPredicted RBP9.09□□□□□ -0.95
GTF3C1-201ENST00000356183 MORN5Q5VZ52 161 aa9.09□□□□□ -0.95
GTF3C1-201ENST00000356183 AMN1Q8IY45 258 aa9.09□□□□□ -0.95
GTF3C1-201ENST00000356183 GREB1Q4ZG55 1949 aa9.09□□□□□ -0.95
GTF3C1-201ENST00000356183 TP53BP1Q12888 1972 aaPredicted RBP9.09□□□□□ -0.96
GTF3C1-201ENST00000356183 A0A1B0GUS0 222 aa9.08□□□□□ -0.96
GTF3C1-201ENST00000356183 LYL1P12980 280 aa9.08□□□□□ -0.96
GTF3C1-201ENST00000356183 C5orf47Q569G3 176 aa9.08□□□□□ -0.96
GTF3C1-201ENST00000356183 PATJQ8NI35 1801 aa9.08□□□□□ -0.96
GTF3C1-201ENST00000356183 RALGAPA1Q6GYQ0 2036 aa9.08□□□□□ -0.96
GTF3C1-201ENST00000356183 LINC01559Q495D7 138 aa9.08□□□□□ -0.96
GTF3C1-201ENST00000356183 C10orf91Q5T1B1 145 aa9.08□□□□□ -0.96
GTF3C1-201ENST00000356183 NEU4Q8WWR8 484 aaPredicted RBP9.08□□□□□ -0.96
GTF3C1-201ENST00000356183 C1orf159Q96HA4 380 aa9.08□□□□□ -0.96
GTF3C1-201ENST00000356183 VCYO14598 125 aa9.08□□□□□ -0.96
GTF3C1-201ENST00000356183 UCNP55089 124 aa9.08□□□□□ -0.96
GTF3C1-201ENST00000356183 SMRP1Q8NCR6 262 aa9.08□□□□□ -0.96
GTF3C1-201ENST00000356183 KLF2Q9Y5W3 355 aaPredicted RBP9.08□□□□□ -0.96
GTF3C1-201ENST00000356183 A0A087WX48 190 aa9.08□□□□□ -0.96
GTF3C1-201ENST00000356183 C9orf118A6NHY6 69 aa9.08□□□□□ -0.96
GTF3C1-201ENST00000356183 ZC2HC1BQ5TFG8 222 aa9.08□□□□□ -0.96
GTF3C1-201ENST00000356183 AGMATQ9BSE5 352 aa9.08□□□□□ -0.96
GTF3C1-201ENST00000356183 TRIOBPQ9H2D6 2365 aa9.08□□□□□ -0.96
GTF3C1-201ENST00000356183 PRIMA1Q86XR5 153 aa9.08□□□□□ -0.96
GTF3C1-201ENST00000356183 TMEM133Q9H2Q1 129 aa9.08□□□□□ -0.96
GTF3C1-201ENST00000356183 LYNX1G3V0Z9 82 aa9.07□□□□□ -0.96
GTF3C1-201ENST00000356183 LYNX1P0DP58 116 aa9.07□□□□□ -0.96
GTF3C1-201ENST00000356183 DUTP33316 252 aaKnown RBP9.07□□□□□ -0.96
GTF3C1-201ENST00000356183 PSME4Q14997 1843 aa9.07□□□□□ -0.96
GTF3C1-201ENST00000356183 TIMM23O14925 209 aa9.07□□□□□ -0.96
GTF3C1-201ENST00000356183 RS1O15537 224 aa9.07□□□□□ -0.96
GTF3C1-201ENST00000356183 PSCAO43653 123 aa9.07□□□□□ -0.96
GTF3C1-201ENST00000356183 TRAV25A0A0B4J276 109 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms