RNA–Protein interactions for RNA: ENST00000355637.8

RBFOX1-203, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 3,321 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-203ENST00000355637 PMVKQ15126 192 aa7.24□□□□□ -1.25
RBFOX1-203ENST00000355637 ZNF56Q15929 161 aa7.24□□□□□ -1.25
RBFOX1-203ENST00000355637 SLC25A47Q6Q0C1 308 aa7.24□□□□□ -1.25
RBFOX1-203ENST00000355637 DSCR8Q96T75 97 aa7.24□□□□□ -1.25
RBFOX1-203ENST00000355637 SZT2Q5T011 3432 aa7.24□□□□□ -1.25
RBFOX1-203ENST00000355637 IGKV1D-13A0A0B4J2D9 117 aa7.24□□□□□ -1.25
RBFOX1-203ENST00000355637 SMIM27A0A1W2PRY6 76 aa7.24□□□□□ -1.25
RBFOX1-203ENST00000355637 FAM90A18PA6NE21 464 aa7.24□□□□□ -1.25
RBFOX1-203ENST00000355637 FAM90A16PA6NEW6 464 aa7.24□□□□□ -1.25
RBFOX1-203ENST00000355637 EPOPA6NHQ4 379 aa7.24□□□□□ -1.25
RBFOX1-203ENST00000355637 FAM90A8PA6NJQ4 464 aa7.24□□□□□ -1.25
RBFOX1-203ENST00000355637 FAM90A9PA6NNJ1 464 aa7.24□□□□□ -1.25
RBFOX1-203ENST00000355637 IGKV1-13P0DP09 117 aa7.24□□□□□ -1.25
RBFOX1-203ENST00000355637 GP1BBP13224 206 aa7.24□□□□□ -1.25
RBFOX1-203ENST00000355637 FAM57AQ8TBR7 257 aa7.24□□□□□ -1.25
RBFOX1-203ENST00000355637 IGKV1-9A0A0C4DH69 117 aa7.24□□□□□ -1.25
RBFOX1-203ENST00000355637 HOXA3O43365 443 aaPredicted RBP7.24□□□□□ -1.25
RBFOX1-203ENST00000355637 MIC13Q5XKP0 118 aa7.24□□□□□ -1.25
RBFOX1-203ENST00000355637 ZGRF1Q86YA3 2104 aa7.24□□□□□ -1.25
RBFOX1-203ENST00000355637 FGFRL1Q8N441 504 aa7.24□□□□□ -1.25
RBFOX1-203ENST00000355637 JPT2Q9H910 190 aa7.24□□□□□ -1.25
RBFOX1-203ENST00000355637 PRDM6Q9NQX0 595 aa7.24□□□□□ -1.25
RBFOX1-203ENST00000355637 PRO0628Q9UI54 55 aa7.24□□□□□ -1.25
RBFOX1-203ENST00000355637 TRAV8-4A0A0B4J246 113 aa7.23□□□□□ -1.25
RBFOX1-203ENST00000355637 SPTY2D1-AS1A0A0U1RR47 76 aa7.23□□□□□ -1.25
RBFOX1-203ENST00000355637 C9JCJ5 164 aa7.23□□□□□ -1.25
RBFOX1-203ENST00000355637 CD3EP07766 207 aa7.23□□□□□ -1.25
RBFOX1-203ENST00000355637 ACP1P24666 158 aa7.23□□□□□ -1.25
RBFOX1-203ENST00000355637 RSPO4Q2I0M5 234 aaPredicted RBP7.23□□□□□ -1.25
RBFOX1-203ENST00000355637 ZNF493Q6ZR52 646 aa7.23□□□□□ -1.25
RBFOX1-203ENST00000355637 GTSCR1Q86UQ5 136 aa7.23□□□□□ -1.25
RBFOX1-203ENST00000355637 PGLYRP4Q96LB8 373 aa7.23□□□□□ -1.25
RBFOX1-203ENST00000355637 RETNQ9HD89 108 aa7.23□□□□□ -1.25
RBFOX1-203ENST00000355637 TRGV11A0A075B6L2 103 aa7.23□□□□□ -1.25
RBFOX1-203ENST00000355637 IGKV2D-26A0A0A0MRZ7 120 aa7.23□□□□□ -1.25
RBFOX1-203ENST00000355637 NPIPB13A6NJU9 1138 aa7.23□□□□□ -1.25
RBFOX1-203ENST00000355637 NPIPB4C9JG80 1138 aa7.23□□□□□ -1.25
RBFOX1-203ENST00000355637 CELA2AP08217 269 aa7.23□□□□□ -1.25
RBFOX1-203ENST00000355637 GCHFRP30047 84 aa7.23□□□□□ -1.25
RBFOX1-203ENST00000355637 PIGYQ3MUY2 71 aa7.23□□□□□ -1.25
RBFOX1-203ENST00000355637 EXOC3-AS1Q8N2X6 119 aa7.23□□□□□ -1.25
RBFOX1-203ENST00000355637 ZNF524Q96C55 264 aa7.23□□□□□ -1.25
RBFOX1-203ENST00000355637 TXNDC17Q9BRA2 123 aa7.23□□□□□ -1.25
RBFOX1-203ENST00000355637 LINC01549A6NIU2 74 aa7.22□□□□□ -1.25
RBFOX1-203ENST00000355637 NPIPB11E5RHQ5 1161 aa7.22□□□□□ -1.25
RBFOX1-203ENST00000355637 MPV17P39210 176 aa7.22□□□□□ -1.25
RBFOX1-203ENST00000355637 ASIPP42127 132 aa7.22□□□□□ -1.25
RBFOX1-203ENST00000355637 FAM27E3Q08E93 113 aa7.22□□□□□ -1.25
RBFOX1-203ENST00000355637 OR1C1Q15619 314 aa7.22□□□□□ -1.25
RBFOX1-203ENST00000355637 DKK2Q9UBU2 259 aa7.22□□□□□ -1.25
RBFOX1-203ENST00000355637 C2orf16Q68DN1 1984 aa7.22□□□□□ -1.25
RBFOX1-203ENST00000355637 IGHV5-51A0A0C4DH38 117 aa7.22□□□□□ -1.25
RBFOX1-203ENST00000355637 A0A0U1RRA0 63 aa7.22□□□□□ -1.25
RBFOX1-203ENST00000355637 H3BTX0 84 aa7.22□□□□□ -1.25
RBFOX1-203ENST00000355637 MGST3O14880 152 aa7.22□□□□□ -1.25
RBFOX1-203ENST00000355637 DHRS3O75911 302 aa7.22□□□□□ -1.25
RBFOX1-203ENST00000355637 IGHV4-34P06331 123 aa7.22□□□□□ -1.25
RBFOX1-203ENST00000355637 HBBP68871 147 aa7.22□□□□□ -1.25
RBFOX1-203ENST00000355637 MRPS21P82921 87 aaKnown RBP7.22□□□□□ -1.25
RBFOX1-203ENST00000355637 DEFB133Q30KQ1 61 aa7.22□□□□□ -1.25
RBFOX1-203ENST00000355637 C3orf22Q8N5N4 141 aa7.22□□□□□ -1.25
RBFOX1-203ENST00000355637 SNRNP40Q96DI7 357 aaKnown RBP7.22□□□□□ -1.25
RBFOX1-203ENST00000355637 PGLYRP1O75594 196 aaPredicted RBP7.22□□□□□ -1.25
RBFOX1-203ENST00000355637 MALP21145 153 aa7.22□□□□□ -1.25
RBFOX1-203ENST00000355637 HERVK_113P61574 105 aa7.22□□□□□ -1.25
RBFOX1-203ENST00000355637 Q6ZS52 159 aa7.22□□□□□ -1.25
RBFOX1-203ENST00000355637 LINC00336Q6ZUF6 198 aa7.22□□□□□ -1.25
RBFOX1-203ENST00000355637 PIP4P1Q86T03 277 aa7.22□□□□□ -1.25
RBFOX1-203ENST00000355637 RNF152Q8N8N0 203 aa7.22□□□□□ -1.25
RBFOX1-203ENST00000355637 FGFBP3Q8TAT2 258 aa7.22□□□□□ -1.25
RBFOX1-203ENST00000355637 VCANP13611 3396 aa7.21□□□□□ -1.25
RBFOX1-203ENST00000355637 IGLV1-36A0A0B4J1U3 117 aa7.21□□□□□ -1.25
RBFOX1-203ENST00000355637 A0A1B0GX51 115 aa7.21□□□□□ -1.25
RBFOX1-203ENST00000355637 SCTP09683 121 aa7.21□□□□□ -1.25
RBFOX1-203ENST00000355637 C1orf195Q5TG92 126 aa7.21□□□□□ -1.25
RBFOX1-203ENST00000355637 HIGD1BQ9P298 99 aa7.21□□□□□ -1.25
RBFOX1-203ENST00000355637 REV3LO60673 3130 aa7.21□□□□□ -1.26
RBFOX1-203ENST00000355637 USF3Q68DE3 2245 aa7.21□□□□□ -1.26
RBFOX1-203ENST00000355637 TMED7-TICAM2A0A0A6YYA0 188 aa7.21□□□□□ -1.26
RBFOX1-203ENST00000355637 IFI6P09912 130 aa7.21□□□□□ -1.26
RBFOX1-203ENST00000355637 TRIP6Q15654 476 aaKnown RBP7.21□□□□□ -1.26
RBFOX1-203ENST00000355637 ZNF441Q8N8Z8 693 aa7.21□□□□□ -1.26
RBFOX1-203ENST00000355637 NTN5Q8WTR8 489 aaPredicted RBP7.21□□□□□ -1.26
RBFOX1-203ENST00000355637 TRANK1O15050 2925 aa7.21□□□□□ -1.26
RBFOX1-203ENST00000355637 hADV29S1A0JD25 119 aa7.21□□□□□ -1.26
RBFOX1-203ENST00000355637 WFDC11Q8NEX6 87 aa7.21□□□□□ -1.26
RBFOX1-203ENST00000355637 MED13Q9UHV7 2174 aa7.2□□□□□ -1.26
RBFOX1-203ENST00000355637 C2CD4DB7Z1M9 353 aa7.2□□□□□ -1.26
RBFOX1-203ENST00000355637 WISP1O95388 367 aa7.2□□□□□ -1.26
RBFOX1-203ENST00000355637 DLX6P56179 175 aa7.2□□□□□ -1.26
RBFOX1-203ENST00000355637 IGLV3-21P80748 117 aaPredicted RBP7.2□□□□□ -1.26
RBFOX1-203ENST00000355637 Q6Q795 121 aa7.2□□□□□ -1.26
RBFOX1-203ENST00000355637 AAMDCQ9H7C9 122 aa7.2□□□□□ -1.26
RBFOX1-203ENST00000355637 IGHV3-20A0A0C4DH32 117 aa7.2□□□□□ -1.26
RBFOX1-203ENST00000355637 ZG16O60844 167 aa7.2□□□□□ -1.26
RBFOX1-203ENST00000355637 MPDU1O75352 247 aa7.2□□□□□ -1.26
RBFOX1-203ENST00000355637 PRSS1P07477 247 aa7.2□□□□□ -1.26
RBFOX1-203ENST00000355637 PRDX2P32119 198 aa7.2□□□□□ -1.26
RBFOX1-203ENST00000355637 C16orf47Q6ZP98 133 aaPredicted RBP7.2□□□□□ -1.26
RBFOX1-203ENST00000355637 MBD3L2Q8NHZ7 208 aaPredicted RBP7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms