RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 C20orf202A1L168 122 aa11.12□□□□□ -0.63
TRIM4-201ENST00000349062 ZFP36P26651 326 aaKnown RBP11.12□□□□□ -0.63
TRIM4-201ENST00000349062 MFAP2P55001 183 aa11.12□□□□□ -0.63
TRIM4-201ENST00000349062 POU2AF1Q16633 256 aa11.12□□□□□ -0.63
TRIM4-201ENST00000349062 TPTE2P1Q5T6R2 138 aa11.12□□□□□ -0.63
TRIM4-201ENST00000349062 NRGNQ92686 78 aa11.12□□□□□ -0.63
TRIM4-201ENST00000349062 BPESC1Q9GZL8 116 aa11.12□□□□□ -0.63
TRIM4-201ENST00000349062 FBXL7Q9UJT9 491 aa11.12□□□□□ -0.63
TRIM4-201ENST00000349062 RNF24Q9Y225 148 aa11.12□□□□□ -0.63
TRIM4-201ENST00000349062 TYMSP04818 313 aa11.12□□□□□ -0.63
TRIM4-201ENST00000349062 LCN12Q6JVE5 192 aa11.12□□□□□ -0.63
TRIM4-201ENST00000349062 MMD2Q8IY49 270 aa11.12□□□□□ -0.63
TRIM4-201ENST00000349062 ZNF596Q8TC21 504 aa11.12□□□□□ -0.63
TRIM4-201ENST00000349062 ZFHX3Q15911 3703 aa11.12□□□□□ -0.63
TRIM4-201ENST00000349062 HELTA6NFD8 242 aa11.11□□□□□ -0.63
TRIM4-201ENST00000349062 C22orf15Q8WYQ4 148 aa11.11□□□□□ -0.63
TRIM4-201ENST00000349062 TP53TG3Q9ULZ0 132 aa11.11□□□□□ -0.63
TRIM4-201ENST00000349062 PRR20EP86478 221 aa11.11□□□□□ -0.63
TRIM4-201ENST00000349062 PRR20CP86479 221 aa11.11□□□□□ -0.63
TRIM4-201ENST00000349062 PRR20DP86480 221 aa11.11□□□□□ -0.63
TRIM4-201ENST00000349062 PRR20BP86481 221 aa11.11□□□□□ -0.63
TRIM4-201ENST00000349062 PRR20AP86496 221 aa11.11□□□□□ -0.63
TRIM4-201ENST00000349062 MAJINQ3KP22 176 aa11.11□□□□□ -0.63
TRIM4-201ENST00000349062 CENPWQ5EE01 88 aa11.11□□□□□ -0.63
TRIM4-201ENST00000349062 GNB4Q9HAV0 340 aa11.11□□□□□ -0.63
TRIM4-201ENST00000349062 MYO9AB2RTY4 2548 aa11.11□□□□□ -0.63
TRIM4-201ENST00000349062 LOC102724200A0A096LPH7 203 aaPredicted RBP11.11□□□□□ -0.63
TRIM4-201ENST00000349062 A1L4Q6 167 aa11.11□□□□□ -0.63
TRIM4-201ENST00000349062 IGLV1-47P01700 117 aa11.11□□□□□ -0.63
TRIM4-201ENST00000349062 GNG4P50150 75 aa11.11□□□□□ -0.63
TRIM4-201ENST00000349062 PAFAH1B2P68402 229 aa11.11□□□□□ -0.63
TRIM4-201ENST00000349062 VMO1Q7Z5L0 202 aa11.11□□□□□ -0.63
TRIM4-201ENST00000349062 STPG4Q8N801 248 aa11.11□□□□□ -0.63
TRIM4-201ENST00000349062 DPM3Q9P2X0 92 aa11.11□□□□□ -0.63
TRIM4-201ENST00000349062 NOTCH3Q9UM47 2321 aa11.11□□□□□ -0.63
TRIM4-201ENST00000349062 LGALS7P47929 136 aa11.1□□□□□ -0.63
TRIM4-201ENST00000349062 FOXL1Q12952 345 aa11.1□□□□□ -0.63
TRIM4-201ENST00000349062 AARDQ4LEZ3 155 aa11.1□□□□□ -0.63
TRIM4-201ENST00000349062 SSX8Q7RTT4 187 aa11.1□□□□□ -0.63
TRIM4-201ENST00000349062 EAF1Q96JC9 268 aaPredicted RBP11.1□□□□□ -0.63
TRIM4-201ENST00000349062 PAXXQ9BUH6 204 aa11.1□□□□□ -0.63
TRIM4-201ENST00000349062 LINC00527Q9UJ94 153 aa11.1□□□□□ -0.63
TRIM4-201ENST00000349062 ANKRD17O75179 2603 aaKnown RBP11.1□□□□□ -0.63
TRIM4-201ENST00000349062 IGLC7A0M8Q6 106 aa11.1□□□□□ -0.63
TRIM4-201ENST00000349062 C8orf88P0DMB2 117 aa11.1□□□□□ -0.63
TRIM4-201ENST00000349062 SRIP30626 198 aa11.1□□□□□ -0.63
TRIM4-201ENST00000349062 TAS2R45P59539 299 aa11.1□□□□□ -0.63
TRIM4-201ENST00000349062 UNQ5815/PRO19632Q6UWF5 114 aa11.1□□□□□ -0.63
TRIM4-201ENST00000349062 NRN1Q9NPD7 142 aa11.1□□□□□ -0.63
TRIM4-201ENST00000349062 GGTLC3B5MD39 225 aa11.1□□□□□ -0.63
TRIM4-201ENST00000349062 H0Y8G0 127 aa11.1□□□□□ -0.63
TRIM4-201ENST00000349062 RPEL1Q2QD12 228 aa11.1□□□□□ -0.63
TRIM4-201ENST00000349062 DYNAPQ8N1N2 210 aa11.1□□□□□ -0.63
TRIM4-201ENST00000349062 ZNF503Q96F45 646 aa11.1□□□□□ -0.63
TRIM4-201ENST00000349062 RELQ04864 619 aaPredicted RBP11.09□□□□□ -0.63
TRIM4-201ENST00000349062 BORCS7Q96B45 105 aa11.09□□□□□ -0.63
TRIM4-201ENST00000349062 RCHY1Q96PM5 261 aa11.09□□□□□ -0.63
TRIM4-201ENST00000349062 SELENOKQ9Y6D0 94 aa11.09□□□□□ -0.63
TRIM4-201ENST00000349062 IGHV3OR16-13A0A075B7E8 117 aa11.09□□□□□ -0.63
TRIM4-201ENST00000349062 IGHV3-74A0A0B4J1X5 117 aa11.09□□□□□ -0.63
TRIM4-201ENST00000349062 TMEM30BQ3MIR4 351 aa11.09□□□□□ -0.63
TRIM4-201ENST00000349062 TIGITQ495A1 244 aa11.09□□□□□ -0.63
TRIM4-201ENST00000349062 Q56UQ5 140 aa11.08□□□□□ -0.64
TRIM4-201ENST00000349062 K7EN84 100 aa11.08□□□□□ -0.64
TRIM4-201ENST00000349062 SLC25A5P05141 298 aaKnown RBP11.08□□□□□ -0.64
TRIM4-201ENST00000349062 LINC00310P59036 64 aa11.08□□□□□ -0.64
TRIM4-201ENST00000349062 ECSCRQ19T08 205 aa11.08□□□□□ -0.64
TRIM4-201ENST00000349062 PATE2Q6UY27 113 aa11.08□□□□□ -0.64
TRIM4-201ENST00000349062 CHODLQ9H9P2 273 aa11.08□□□□□ -0.64
TRIM4-201ENST00000349062 IL36BQ9NZH7 164 aa11.08□□□□□ -0.64
TRIM4-201ENST00000349062 AMMECR1Q9Y4X0 333 aaPredicted RBP11.08□□□□□ -0.64
TRIM4-201ENST00000349062 FBXL19-AS1Q494R0 122 aa11.07□□□□□ -0.64
TRIM4-201ENST00000349062 TMEM219Q86XT9 240 aa11.07□□□□□ -0.64
TRIM4-201ENST00000349062 LINC00311Q8N616 119 aa11.07□□□□□ -0.64
TRIM4-201ENST00000349062 ITLN2Q8WWU7 325 aaPredicted RBP11.07□□□□□ -0.64
TRIM4-201ENST00000349062 TMUB1Q9BVT8 246 aa11.07□□□□□ -0.64
TRIM4-201ENST00000349062 PGPA6NDG6 321 aa11.07□□□□□ -0.64
TRIM4-201ENST00000349062 COMPP49747 757 aaPredicted RBP11.07□□□□□ -0.64
TRIM4-201ENST00000349062 CAMPP49913 170 aa11.07□□□□□ -0.64
TRIM4-201ENST00000349062 BRD3OSQ6XYD6 125 aa11.07□□□□□ -0.64
TRIM4-201ENST00000349062 C20orf144Q9BQM9 153 aa11.07□□□□□ -0.64
TRIM4-201ENST00000349062 TCRBV4S1A1TA0A5B7 111 aa11.07□□□□□ -0.64
TRIM4-201ENST00000349062 BPIFB3P59826 476 aa11.07□□□□□ -0.64
TRIM4-201ENST00000349062 FAM120AOSQ5T036 256 aa11.07□□□□□ -0.64
TRIM4-201ENST00000349062 TEX43Q6ZNM6 134 aa11.07□□□□□ -0.64
TRIM4-201ENST00000349062 PSG1P11464 419 aa11.06□□□□□ -0.64
TRIM4-201ENST00000349062 S100A7P31151 101 aa11.06□□□□□ -0.64
TRIM4-201ENST00000349062 MAPK1IP1LQ8NDC0 245 aa11.06□□□□□ -0.64
TRIM4-201ENST00000349062 SLC25A2Q9BXI2 301 aa11.06□□□□□ -0.64
TRIM4-201ENST00000349062 TMEM167BQ9NRX6 74 aa11.06□□□□□ -0.64
TRIM4-201ENST00000349062 LAMTOR2Q9Y2Q5 125 aa11.06□□□□□ -0.64
TRIM4-201ENST00000349062 TRAV8-1A0A0A6YYK1 113 aa11.06□□□□□ -0.64
TRIM4-201ENST00000349062 GPX1P07203 203 aa11.06□□□□□ -0.64
TRIM4-201ENST00000349062 VAMP3Q15836 100 aa11.06□□□□□ -0.64
TRIM4-201ENST00000349062 RNASE8Q8TDE3 154 aaKnown RBP11.06□□□□□ -0.64
TRIM4-201ENST00000349062 RASL11BQ9BPW5 248 aa11.06□□□□□ -0.64
TRIM4-201ENST00000349062 TP73-AS1Q9UF72 201 aa11.06□□□□□ -0.64
TRIM4-201ENST00000349062 IGHV3-49A0A0A0MS15 119 aa11.05□□□□□ -0.64
TRIM4-201ENST00000349062 CBY3A6NI87 242 aa11.05□□□□□ -0.64
TRIM4-201ENST00000349062 OR2J3O76001 311 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 167.5 ms