RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 HBDP02042 147 aa11.97□□□□□ -0.49
NUP50-201ENST00000347635 JMJD8Q96S16 334 aa11.97□□□□□ -0.49
NUP50-201ENST00000347635 PSG1P11464 419 aa11.96□□□□□ -0.49
NUP50-201ENST00000347635 EXOC3-AS1Q8N2X6 119 aa11.96□□□□□ -0.49
NUP50-201ENST00000347635 ZNF502Q8TBZ5 544 aa11.96□□□□□ -0.49
NUP50-201ENST00000347635 SLC25A39Q9BZJ4 359 aaPredicted RBP11.96□□□□□ -0.49
NUP50-201ENST00000347635 TMEM160Q9NX00 188 aa11.96□□□□□ -0.49
NUP50-201ENST00000347635 DCAF16Q9NXF7 216 aa11.96□□□□□ -0.49
NUP50-201ENST00000347635 OOSP1A8MZH6 123 aa11.96□□□□□ -0.49
NUP50-201ENST00000347635 TOMM40O96008 361 aa11.96□□□□□ -0.49
NUP50-201ENST00000347635 WFDC3Q8IUB2 231 aa11.96□□□□□ -0.49
NUP50-201ENST00000347635 TMEM190Q8WZ59 177 aa11.96□□□□□ -0.49
NUP50-201ENST00000347635 H3BUT2 72 aa11.96□□□□□ -0.49
NUP50-201ENST00000347635 ZNF134P52741 427 aa11.96□□□□□ -0.49
NUP50-201ENST00000347635 C17orf58Q2M2W7 97 aa11.96□□□□□ -0.49
NUP50-201ENST00000347635 UBE2V1Q13404 147 aa11.96□□□□□ -0.5
NUP50-201ENST00000347635 PSMG4Q5JS54 123 aa11.96□□□□□ -0.5
NUP50-201ENST00000347635 IGHV1-8P0DP01 117 aa11.95□□□□□ -0.5
NUP50-201ENST00000347635 SPCS1Q9Y6A9 102 aa11.95□□□□□ -0.5
NUP50-201ENST00000347635 A0A0G2JLM5 398 aa11.95□□□□□ -0.5
NUP50-201ENST00000347635 ADIPOQQ15848 244 aa11.95□□□□□ -0.5
NUP50-201ENST00000347635 IGLV2-14P01704 120 aa11.95□□□□□ -0.5
NUP50-201ENST00000347635 LY6EQ16553 131 aa11.95□□□□□ -0.5
NUP50-201ENST00000347635 ZNF418Q8TF45 676 aaPredicted RBP11.95□□□□□ -0.5
NUP50-201ENST00000347635 FOXC2Q99958 501 aa11.95□□□□□ -0.5
NUP50-201ENST00000347635 NCOR1P1Q9H4R4 102 aa11.95□□□□□ -0.5
NUP50-201ENST00000347635 KIR2DL5BA0A0G2JN68 375 aa11.95□□□□□ -0.5
NUP50-201ENST00000347635 KIR2DL5BA0A0G2JPC4 375 aa11.95□□□□□ -0.5
NUP50-201ENST00000347635 TMEM155Q4W5P6 130 aa11.95□□□□□ -0.5
NUP50-201ENST00000347635 TM4SF20Q53R12 229 aa11.95□□□□□ -0.5
NUP50-201ENST00000347635 MPV17L2Q567V2 206 aa11.95□□□□□ -0.5
NUP50-201ENST00000347635 KIR2DL5AQ8N109 375 aa11.95□□□□□ -0.5
NUP50-201ENST00000347635 OR4X2Q8NGF9 303 aa11.95□□□□□ -0.5
NUP50-201ENST00000347635 NDUFS8O00217 210 aa11.94□□□□□ -0.5
NUP50-201ENST00000347635 IGLC2P0DOY2 106 aa11.94□□□□□ -0.5
NUP50-201ENST00000347635 IGLC3P0DOY3 106 aa11.94□□□□□ -0.5
NUP50-201ENST00000347635 LEPP41159 167 aa11.94□□□□□ -0.5
NUP50-201ENST00000347635 LDLRAD2Q5SZI1 272 aa11.94□□□□□ -0.5
NUP50-201ENST00000347635 Q6ZPA2 131 aa11.94□□□□□ -0.5
NUP50-201ENST00000347635 ODF3L1Q8IXM7 274 aa11.94□□□□□ -0.5
NUP50-201ENST00000347635 ZNRD1Q9P1U0 126 aa11.94□□□□□ -0.5
NUP50-201ENST00000347635 PHLDA3Q9Y5J5 127 aa11.94□□□□□ -0.5
NUP50-201ENST00000347635 ATP5LO75964 103 aa11.94□□□□□ -0.5
NUP50-201ENST00000347635 CACNG7P62955 275 aa11.94□□□□□ -0.5
NUP50-201ENST00000347635 FAM71F2Q6NXP2 309 aa11.94□□□□□ -0.5
NUP50-201ENST00000347635 GFRA4Q9GZZ7 299 aa11.94□□□□□ -0.5
NUP50-201ENST00000347635 IGHV2-26A0A0B4J1V2 119 aa11.94□□□□□ -0.5
NUP50-201ENST00000347635 SLC25A16P16260 332 aa11.94□□□□□ -0.5
NUP50-201ENST00000347635 SEC11AP67812 179 aa11.94□□□□□ -0.5
NUP50-201ENST00000347635 PRR30Q53SZ7 412 aaPredicted RBP11.94□□□□□ -0.5
NUP50-201ENST00000347635 NDUFA4L2Q9NRX3 87 aa11.94□□□□□ -0.5
NUP50-201ENST00000347635 KIAA2026Q5HYC2 2103 aa11.94□□□□□ -0.5
NUP50-201ENST00000347635 TRAV8-6A0A0B4J262 113 aa11.94□□□□□ -0.5
NUP50-201ENST00000347635 SMAD7O15105 426 aaKnown RBP11.94□□□□□ -0.5
NUP50-201ENST00000347635 NPPCP23582 126 aa11.94□□□□□ -0.5
NUP50-201ENST00000347635 SLAQ13239 276 aa11.94□□□□□ -0.5
NUP50-201ENST00000347635 AMMECR1LQ6DCA0 310 aa11.94□□□□□ -0.5
NUP50-201ENST00000347635 KLK15Q9H2R5 256 aa11.94□□□□□ -0.5
NUP50-201ENST00000347635 FNDC4Q9H6D8 234 aaPredicted RBP11.94□□□□□ -0.5
NUP50-201ENST00000347635 PMS2P5A8MQ11 134 aa11.94□□□□□ -0.5
NUP50-201ENST00000347635 NPSP0C0P6 89 aa11.94□□□□□ -0.5
NUP50-201ENST00000347635 DNAJC13O75165 2243 aa11.93□□□□□ -0.5
NUP50-201ENST00000347635 PCNX2A6NKB5 2137 aa11.93□□□□□ -0.5
NUP50-201ENST00000347635 H3BVH4 76 aa11.93□□□□□ -0.5
NUP50-201ENST00000347635 M0R1W7 72 aa11.93□□□□□ -0.5
NUP50-201ENST00000347635 PRR20EP86478 221 aa11.93□□□□□ -0.5
NUP50-201ENST00000347635 PRR20CP86479 221 aa11.93□□□□□ -0.5
NUP50-201ENST00000347635 PRR20DP86480 221 aa11.93□□□□□ -0.5
NUP50-201ENST00000347635 PRR20BP86481 221 aa11.93□□□□□ -0.5
NUP50-201ENST00000347635 PRR20AP86496 221 aa11.93□□□□□ -0.5
NUP50-201ENST00000347635 GAGE1Q13065 139 aa11.93□□□□□ -0.5
NUP50-201ENST00000347635 JKAMPQ9P055 326 aa11.93□□□□□ -0.5
NUP50-201ENST00000347635 COX11Q9Y6N1 276 aa11.93□□□□□ -0.5
NUP50-201ENST00000347635 F2Z2F3 143 aa11.93□□□□□ -0.5
NUP50-201ENST00000347635 MINOS1Q5TGZ0 78 aa11.93□□□□□ -0.5
NUP50-201ENST00000347635 FAM231DQ6ZW35 169 aa11.93□□□□□ -0.5
NUP50-201ENST00000347635 C11orf53Q8IXP5 236 aa11.93□□□□□ -0.5
NUP50-201ENST00000347635 C5orf30Q96GV9 206 aa11.93□□□□□ -0.5
NUP50-201ENST00000347635 MINOS1-NBL1R4GNA1 71 aa11.93□□□□□ -0.5
NUP50-201ENST00000347635 RNF5Q99942 180 aa11.93□□□□□ -0.5
NUP50-201ENST00000347635 IGHV3-66A0A0C4DH42 116 aa11.92□□□□□ -0.5
NUP50-201ENST00000347635 DLX1P56177 255 aa11.92□□□□□ -0.5
NUP50-201ENST00000347635 TPTE2P1Q5T6R2 138 aa11.92□□□□□ -0.5
NUP50-201ENST00000347635 Q86TA4 180 aa11.92□□□□□ -0.5
NUP50-201ENST00000347635 IGHV1-3A0A0C4DH29 117 aa11.92□□□□□ -0.5
NUP50-201ENST00000347635 IGHV3OR16-13A0A075B7E8 117 aa11.92□□□□□ -0.5
NUP50-201ENST00000347635 IGHV3-74A0A0B4J1X5 117 aa11.92□□□□□ -0.5
NUP50-201ENST00000347635 LOC107984156A0A0G2JMH3 177 aa11.92□□□□□ -0.5
NUP50-201ENST00000347635 B4DSR2 109 aa11.92□□□□□ -0.5
NUP50-201ENST00000347635 ARL17AQ8IVW1 177 aa11.92□□□□□ -0.5
NUP50-201ENST00000347635 TTC28Q96AY4 2481 aa11.92□□□□□ -0.5
NUP50-201ENST00000347635 FABP5P3A8MUU1 101 aa11.92□□□□□ -0.5
NUP50-201ENST00000347635 TIMM23O14925 209 aa11.92□□□□□ -0.5
NUP50-201ENST00000347635 PRB4P10163 310 aaPredicted RBP11.92□□□□□ -0.5
NUP50-201ENST00000347635 GATA4P43694 442 aa11.92□□□□□ -0.5
NUP50-201ENST00000347635 ZNF833PQ6ZTB9 187 aa11.92□□□□□ -0.5
NUP50-201ENST00000347635 YPEL4Q96NS1 127 aa11.92□□□□□ -0.5
NUP50-201ENST00000347635 RCHY1Q96PM5 261 aa11.92□□□□□ -0.5
NUP50-201ENST00000347635 FAM215AQ9Y5M1 114 aa11.92□□□□□ -0.5
NUP50-201ENST00000347635 NUP210LQ5VU65 1888 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms