RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 RNF24Q9Y225 148 aa11.66□□□□□ -0.54
TSPAN4-201ENST00000346501 RCL1Q9Y2P8 373 aaKnown RBP11.66□□□□□ -0.54
TSPAN4-201ENST00000346501 ORM2P19652 201 aa11.65□□□□□ -0.54
TSPAN4-201ENST00000346501 GALR1P47211 349 aa11.65□□□□□ -0.54
TSPAN4-201ENST00000346501 CAV2P51636 162 aa11.65□□□□□ -0.54
TSPAN4-201ENST00000346501 S100A10P60903 97 aa11.65□□□□□ -0.54
TSPAN4-201ENST00000346501 RRAS2P62070 204 aaPredicted RBP11.65□□□□□ -0.54
TSPAN4-201ENST00000346501 TMEM41BQ5BJD5 291 aa11.65□□□□□ -0.54
TSPAN4-201ENST00000346501 PSMG4Q5JS54 123 aa11.65□□□□□ -0.54
TSPAN4-201ENST00000346501 CASC10Q5T4H9 136 aa11.65□□□□□ -0.54
TSPAN4-201ENST00000346501 TMEM14EPQ6UXP3 125 aa11.65□□□□□ -0.54
TSPAN4-201ENST00000346501 DCANP1Q8TF63 244 aa11.65□□□□□ -0.54
TSPAN4-201ENST00000346501 RNF183Q96D59 192 aa11.65□□□□□ -0.54
TSPAN4-201ENST00000346501 GGACTQ9BVM4 153 aa11.65□□□□□ -0.54
TSPAN4-201ENST00000346501 TENM3Q9P273 2699 aa11.64□□□□□ -0.55
TSPAN4-201ENST00000346501 C7orf66A4D0T2 115 aa11.64□□□□□ -0.55
TSPAN4-201ENST00000346501 MEOX2P50222 304 aa11.64□□□□□ -0.55
TSPAN4-201ENST00000346501 NUTF2P61970 127 aaKnown RBP11.64□□□□□ -0.55
TSPAN4-201ENST00000346501 RAB31Q13636 194 aa11.64□□□□□ -0.55
TSPAN4-201ENST00000346501 ZNF124Q15973 351 aa11.64□□□□□ -0.55
TSPAN4-201ENST00000346501 MORN3Q6PF18 240 aaPredicted RBP11.64□□□□□ -0.55
TSPAN4-201ENST00000346501 TEPPQ6URK8 271 aa11.64□□□□□ -0.55
TSPAN4-201ENST00000346501 CYP2G1PQ6ZSU1 146 aa11.64□□□□□ -0.55
TSPAN4-201ENST00000346501 OR1B1Q8NGR6 318 aa11.64□□□□□ -0.55
TSPAN4-201ENST00000346501 GATAD1Q8WUU5 269 aa11.64□□□□□ -0.55
TSPAN4-201ENST00000346501 GPR82Q96P67 336 aa11.64□□□□□ -0.55
TSPAN4-201ENST00000346501 IGKV1OR2-108A0A075B7D4 117 aa11.63□□□□□ -0.55
TSPAN4-201ENST00000346501 INMT-MINDY4F8WBC2 141 aa11.63□□□□□ -0.55
TSPAN4-201ENST00000346501 GOSR2O14653 212 aa11.63□□□□□ -0.55
TSPAN4-201ENST00000346501 CA1P00915 261 aaPredicted RBP11.63□□□□□ -0.55
TSPAN4-201ENST00000346501 RLN2P04090 185 aa11.63□□□□□ -0.55
TSPAN4-201ENST00000346501 SPP1P10451 314 aa11.63□□□□□ -0.55
TSPAN4-201ENST00000346501 PAX9P55771 341 aa11.63□□□□□ -0.55
TSPAN4-201ENST00000346501 ZFAND6Q6FIF0 208 aa11.63□□□□□ -0.55
TSPAN4-201ENST00000346501 FAM24BQ8N5W8 94 aa11.63□□□□□ -0.55
TSPAN4-201ENST00000346501 SLC25A22Q9H936 323 aa11.63□□□□□ -0.55
TSPAN4-201ENST00000346501 K7EPK0 472 aa11.62□□□□□ -0.55
TSPAN4-201ENST00000346501 HYPMO75409 117 aa11.62□□□□□ -0.55
TSPAN4-201ENST00000346501 OR5G3P0C626 314 aa11.62□□□□□ -0.55
TSPAN4-201ENST00000346501 ACTL10Q5JWF8 245 aa11.62□□□□□ -0.55
TSPAN4-201ENST00000346501 STX12Q86Y82 276 aa11.62□□□□□ -0.55
TSPAN4-201ENST00000346501 RARRES2Q99969 163 aa11.62□□□□□ -0.55
TSPAN4-201ENST00000346501 PMS2P5A8MQ11 134 aa11.61□□□□□ -0.55
TSPAN4-201ENST00000346501 DEDDO75618 318 aa11.61□□□□□ -0.55
TSPAN4-201ENST00000346501 LINC00869P0C866 280 aa11.61□□□□□ -0.55
TSPAN4-201ENST00000346501 HBG1P69891 147 aa11.61□□□□□ -0.55
TSPAN4-201ENST00000346501 HBG2P69892 147 aa11.61□□□□□ -0.55
TSPAN4-201ENST00000346501 CYCSP99999 105 aaKnown RBP11.61□□□□□ -0.55
TSPAN4-201ENST00000346501 PXDC1Q5TGL8 231 aa11.61□□□□□ -0.55
TSPAN4-201ENST00000346501 NRARPQ7Z6K4 114 aa11.61□□□□□ -0.55
TSPAN4-201ENST00000346501 ZNF546Q86UE3 836 aa11.61□□□□□ -0.55
TSPAN4-201ENST00000346501 HIGD1AQ9Y241 93 aa11.61□□□□□ -0.55
TSPAN4-201ENST00000346501 ZNF98A6NK75 572 aa11.6□□□□□ -0.55
TSPAN4-201ENST00000346501 KNCNA6PVL3 124 aa11.6□□□□□ -0.55
TSPAN4-201ENST00000346501 GATA2P23769 480 aaPredicted RBP11.6□□□□□ -0.55
TSPAN4-201ENST00000346501 PSMB3P49720 205 aa11.6□□□□□ -0.55
TSPAN4-201ENST00000346501 SLC38A11Q08AI6 406 aa11.6□□□□□ -0.55
TSPAN4-201ENST00000346501 LINC00052Q96N35 136 aa11.6□□□□□ -0.55
TSPAN4-201ENST00000346501 C1QTNF4Q9BXJ3 329 aa11.6□□□□□ -0.55
TSPAN4-201ENST00000346501 ISLRO14498 428 aa11.59□□□□□ -0.55
TSPAN4-201ENST00000346501 CCNKO75909 580 aa11.59□□□□□ -0.55
TSPAN4-201ENST00000346501 RPL7P18124 248 aaKnown RBP11.59□□□□□ -0.55
TSPAN4-201ENST00000346501 ATF4P18848 351 aaPredicted RBP11.59□□□□□ -0.55
TSPAN4-201ENST00000346501 S100A11P31949 105 aa11.59□□□□□ -0.55
TSPAN4-201ENST00000346501 RAB32Q13637 225 aa11.59□□□□□ -0.55
TSPAN4-201ENST00000346501 TRPT1Q86TN4 253 aaKnown RBP11.59□□□□□ -0.55
TSPAN4-201ENST00000346501 OR11H2Q8NH07 326 aa11.59□□□□□ -0.55
TSPAN4-201ENST00000346501 C16orf92Q96LL3 132 aa11.59□□□□□ -0.55
TSPAN4-201ENST00000346501 DOK5Q9P104 306 aa11.59□□□□□ -0.55
TSPAN4-201ENST00000346501 NBEAL2Q6ZNJ1 2754 aa11.58□□□□□ -0.56
TSPAN4-201ENST00000346501 A0A0J9YWU9 116 aa11.58□□□□□ -0.56
TSPAN4-201ENST00000346501 SSNA1O43805 119 aa11.58□□□□□ -0.56
TSPAN4-201ENST00000346501 CST7O76096 145 aa11.58□□□□□ -0.56
TSPAN4-201ENST00000346501 SULT1A1P50225 295 aa11.58□□□□□ -0.56
TSPAN4-201ENST00000346501 PLP1P60201 277 aa11.58□□□□□ -0.56
TSPAN4-201ENST00000346501 IFITM3Q01628 133 aa11.58□□□□□ -0.56
TSPAN4-201ENST00000346501 SPATA31B1PQ5VZV4 182 aa11.58□□□□□ -0.56
TSPAN4-201ENST00000346501 EBLN2Q6P2I7 272 aa11.58□□□□□ -0.56
TSPAN4-201ENST00000346501 Q6ZRG5 221 aa11.58□□□□□ -0.56
TSPAN4-201ENST00000346501 LRRC20Q8TCA0 184 aa11.58□□□□□ -0.56
TSPAN4-201ENST00000346501 MARVELD1Q9BSK0 173 aa11.58□□□□□ -0.56
TSPAN4-201ENST00000346501 RSG1Q9BU20 258 aa11.58□□□□□ -0.56
TSPAN4-201ENST00000346501 SLC25A31Q9H0C2 315 aa11.58□□□□□ -0.56
TSPAN4-201ENST00000346501 ARL6Q9H0F7 186 aa11.58□□□□□ -0.56
TSPAN4-201ENST00000346501 RPRMQ9NS64 109 aa11.58□□□□□ -0.56
TSPAN4-201ENST00000346501 LYRM2Q9NU23 88 aaPredicted RBP11.58□□□□□ -0.56
TSPAN4-201ENST00000346501 UQCC1Q9NVA1 299 aa11.58□□□□□ -0.56
TSPAN4-201ENST00000346501 FAM24AA6NFZ4 105 aa11.57□□□□□ -0.56
TSPAN4-201ENST00000346501 AGPAT2O15120 278 aa11.57□□□□□ -0.56
TSPAN4-201ENST00000346501 ATP6V1FQ16864 119 aa11.57□□□□□ -0.56
TSPAN4-201ENST00000346501 SHANK2-AS3Q9BTD1 123 aa11.57□□□□□ -0.56
TSPAN4-201ENST00000346501 SLC25A39Q9BZJ4 359 aaPredicted RBP11.57□□□□□ -0.56
TSPAN4-201ENST00000346501 NMES1Q9C002 83 aa11.57□□□□□ -0.56
TSPAN4-201ENST00000346501 SLC25A32Q9H2D1 315 aa11.57□□□□□ -0.56
TSPAN4-201ENST00000346501 ELOA3CA0A087WX78 387 aaPredicted RBP11.56□□□□□ -0.56
TSPAN4-201ENST00000346501 CXorf65A6NEN9 183 aa11.56□□□□□ -0.56
TSPAN4-201ENST00000346501 H3BRN7 92 aa11.56□□□□□ -0.56
TSPAN4-201ENST00000346501 COX7A2P2O60397 106 aa11.56□□□□□ -0.56
TSPAN4-201ENST00000346501 PET100P0DJ07 73 aa11.56□□□□□ -0.56
TSPAN4-201ENST00000346501 CAMLGP49069 296 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 124.8 ms