RNA–Protein interactions for RNA: ENST00000346495.6

TSPAN3-202, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-202ENST00000346495 A0A1W2PRE2 83 aa16.67■□□□□ 0.26
TSPAN3-202ENST00000346495 H3BRN7 92 aa16.67■□□□□ 0.26
TSPAN3-202ENST00000346495 TGOLN2O43493 480 aa16.67■□□□□ 0.26
TSPAN3-202ENST00000346495 PF4V1P10720 104 aa16.67■□□□□ 0.26
TSPAN3-202ENST00000346495 FXYD5Q96DB9 178 aa16.67■□□□□ 0.26
TSPAN3-202ENST00000346495 SHANK2-AS3Q9BTD1 123 aa16.67■□□□□ 0.26
TSPAN3-202ENST00000346495 TEX15Q9BXT5 2789 aa16.67■□□□□ 0.26
TSPAN3-202ENST00000346495 ZNF727A8MUV8 499 aa16.67■□□□□ 0.26
TSPAN3-202ENST00000346495 M0R036 132 aa16.67■□□□□ 0.26
TSPAN3-202ENST00000346495 USF2Q15853 346 aaPredicted RBP16.67■□□□□ 0.26
TSPAN3-202ENST00000346495 ITPR2Q14571 2701 aa16.66■□□□□ 0.26
TSPAN3-202ENST00000346495 TMEM95Q3KNT9 176 aa16.66■□□□□ 0.26
TSPAN3-202ENST00000346495 RPUSD4Q96CM3 377 aaKnown RBP16.66■□□□□ 0.26
TSPAN3-202ENST00000346495 TVP23CQ96ET8 276 aa16.66■□□□□ 0.26
TSPAN3-202ENST00000346495 PARLQ9H300 379 aa16.66■□□□□ 0.26
TSPAN3-202ENST00000346495 ZNF702PQ9H963 129 aa16.66■□□□□ 0.26
TSPAN3-202ENST00000346495 GNB4Q9HAV0 340 aa16.66■□□□□ 0.26
TSPAN3-202ENST00000346495 TMEM14CQ9P0S9 112 aa16.66■□□□□ 0.26
TSPAN3-202ENST00000346495 CCDC168Q8NDH2 2452 aa16.65■□□□□ 0.26
TSPAN3-202ENST00000346495 A0A0G2JLM5 398 aa16.65■□□□□ 0.26
TSPAN3-202ENST00000346495 TMEM89A2RUT3 159 aa16.65■□□□□ 0.26
TSPAN3-202ENST00000346495 GP9P14770 177 aa16.65■□□□□ 0.26
TSPAN3-202ENST00000346495 S100A7P31151 101 aa16.65■□□□□ 0.26
TSPAN3-202ENST00000346495 AWAT1Q58HT5 328 aa16.65■□□□□ 0.26
TSPAN3-202ENST00000346495 SMIM7Q9BQ49 75 aa16.65■□□□□ 0.26
TSPAN3-202ENST00000346495 TMEM160Q9NX00 188 aa16.65■□□□□ 0.26
TSPAN3-202ENST00000346495 IGHG4P01861 327 aa16.64■□□□□ 0.25
TSPAN3-202ENST00000346495 RELQ04864 619 aaPredicted RBP16.64■□□□□ 0.25
TSPAN3-202ENST00000346495 SCGB2A2Q13296 93 aa16.64■□□□□ 0.25
TSPAN3-202ENST00000346495 BTN1A1Q13410 526 aa16.64■□□□□ 0.25
TSPAN3-202ENST00000346495 ZNF674Q2M3X9 581 aa16.64■□□□□ 0.25
TSPAN3-202ENST00000346495 LEMD1Q68G75 181 aa16.64■□□□□ 0.25
TSPAN3-202ENST00000346495 RNF24Q9Y225 148 aa16.64■□□□□ 0.25
TSPAN3-202ENST00000346495 CSMD1Q96PZ7 3565 aa16.64■□□□□ 0.25
TSPAN3-202ENST00000346495 BMPR1BO00238 502 aa16.63■□□□□ 0.25
TSPAN3-202ENST00000346495 NPPCP23582 126 aa16.63■□□□□ 0.25
TSPAN3-202ENST00000346495 RAB9AP51151 201 aa16.63■□□□□ 0.25
TSPAN3-202ENST00000346495 PNRC1Q12796 327 aaPredicted RBP16.63■□□□□ 0.25
TSPAN3-202ENST00000346495 RHEBQ15382 184 aa16.63■□□□□ 0.25
TSPAN3-202ENST00000346495 C20orf24Q9BUV8 137 aa16.63■□□□□ 0.25
TSPAN3-202ENST00000346495 KLK15Q9H2R5 256 aa16.63■□□□□ 0.25
TSPAN3-202ENST00000346495 RABAC1Q9UI14 185 aa16.63■□□□□ 0.25
TSPAN3-202ENST00000346495 TOMM20LQ6UXN7 152 aa16.63■□□□□ 0.25
TSPAN3-202ENST00000346495 C11orf52Q96A22 123 aa16.63■□□□□ 0.25
TSPAN3-202ENST00000346495 DUX5Q96PT3 197 aa16.63■□□□□ 0.25
TSPAN3-202ENST00000346495 NAT8Q9UHE5 227 aa16.63■□□□□ 0.25
TSPAN3-202ENST00000346495 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.62■□□□□ 0.25
TSPAN3-202ENST00000346495 SCO2A0A1W2PP80 73 aa16.62■□□□□ 0.25
TSPAN3-202ENST00000346495 ZNF98A6NK75 572 aa16.62■□□□□ 0.25
TSPAN3-202ENST00000346495 NDUFB4O95168 129 aa16.62■□□□□ 0.25
TSPAN3-202ENST00000346495 NBEAP1P0C6P0 100 aa16.62■□□□□ 0.25
TSPAN3-202ENST00000346495 SLC35B1P78383 322 aa16.62■□□□□ 0.25
TSPAN3-202ENST00000346495 ZNF343Q6P1L6 599 aa16.62■□□□□ 0.25
TSPAN3-202ENST00000346495 BPIFA4PQ86YQ2 179 aa16.62■□□□□ 0.25
TSPAN3-202ENST00000346495 Q8N2B8 174 aa16.62■□□□□ 0.25
TSPAN3-202ENST00000346495 ZNF414Q96IQ9 312 aa16.62■□□□□ 0.25
TSPAN3-202ENST00000346495 ZFAND3Q9H8U3 227 aa16.62■□□□□ 0.25
TSPAN3-202ENST00000346495 ZFHX3Q15911 3703 aa16.61■□□□□ 0.25
TSPAN3-202ENST00000346495 FASNP49327 2511 aaKnown RBP16.61■□□□□ 0.25
TSPAN3-202ENST00000346495 FLNAP21333 2647 aaKnown RBP16.61■□□□□ 0.25
TSPAN3-202ENST00000346495 C7orf77A4D0Y5 90 aa16.61■□□□□ 0.25
TSPAN3-202ENST00000346495 GGTLC3B5MD39 225 aa16.61■□□□□ 0.25
TSPAN3-202ENST00000346495 PSMB8P28062 276 aa16.61■□□□□ 0.25
TSPAN3-202ENST00000346495 ARL3P36405 182 aa16.61■□□□□ 0.25
TSPAN3-202ENST00000346495 TMEM241Q24JQ0 296 aa16.61■□□□□ 0.25
TSPAN3-202ENST00000346495 ZNF329Q86UD4 541 aa16.61■□□□□ 0.25
TSPAN3-202ENST00000346495 SDF2L1Q9HCN8 221 aa16.61■□□□□ 0.25
TSPAN3-202ENST00000346495 RPS10P5Q9NQ39 176 aa16.61■□□□□ 0.25
TSPAN3-202ENST00000346495 IGHV3-35A0A0C4DH35 117 aa16.6■□□□□ 0.25
TSPAN3-202ENST00000346495 HIST1H1EP10412 219 aaKnown RBP16.6■□□□□ 0.25
TSPAN3-202ENST00000346495 SUMO1P63165 101 aaKnown RBP16.6■□□□□ 0.25
TSPAN3-202ENST00000346495 DNAJC9-AS1A6NH13 148 aa16.59■□□□□ 0.25
TSPAN3-202ENST00000346495 PPP5D1E7EU14 171 aa16.59■□□□□ 0.25
TSPAN3-202ENST00000346495 DNASE2O00115 360 aaPredicted RBP16.59■□□□□ 0.25
TSPAN3-202ENST00000346495 OR4F17Q8NGA8 305 aa16.59■□□□□ 0.25
TSPAN3-202ENST00000346495 BLNKQ8WV28 456 aa16.59■□□□□ 0.25
TSPAN3-202ENST00000346495 ZNF469Q96JG9 3925 aaPredicted RBP16.59■□□□□ 0.25
TSPAN3-202ENST00000346495 B4DEV8 164 aa16.59■□□□□ 0.25
TSPAN3-202ENST00000346495 FAM209BQ5JX69 171 aa16.59■□□□□ 0.25
TSPAN3-202ENST00000346495 OR4X2Q8NGF9 303 aa16.59■□□□□ 0.25
TSPAN3-202ENST00000346495 TCEAL7Q9BRU2 100 aa16.59■□□□□ 0.25
TSPAN3-202ENST00000346495 HECTD1Q9ULT8 2610 aa16.59■□□□□ 0.25
TSPAN3-202ENST00000346495 AKAP9Q99996 3911 aa16.58■□□□□ 0.24
TSPAN3-202ENST00000346495 IGHV3-11P01762 117 aa16.58■□□□□ 0.24
TSPAN3-202ENST00000346495 TEX38Q6PEX7 206 aa16.58■□□□□ 0.24
TSPAN3-202ENST00000346495 CRYBB3P26998 211 aa16.57■□□□□ 0.24
TSPAN3-202ENST00000346495 RANP62826 216 aaKnown RBP16.57■□□□□ 0.24
TSPAN3-202ENST00000346495 FOXE3Q13461 319 aa16.57■□□□□ 0.24
TSPAN3-202ENST00000346495 LCNL1Q6ZST4 164 aa16.57■□□□□ 0.24
TSPAN3-202ENST00000346495 DERL1Q9BUN8 251 aa16.57■□□□□ 0.24
TSPAN3-202ENST00000346495 ELOVL1Q9BW60 279 aa16.57■□□□□ 0.24
TSPAN3-202ENST00000346495 ZNF586Q9NXT0 402 aa16.57■□□□□ 0.24
TSPAN3-202ENST00000346495 MRPS12O15235 138 aaKnown RBP16.56■□□□□ 0.24
TSPAN3-202ENST00000346495 ELANEP08246 267 aa16.56■□□□□ 0.24
TSPAN3-202ENST00000346495 SNRPCP09234 159 aaKnown RBP16.56■□□□□ 0.24
TSPAN3-202ENST00000346495 IGLC2P0DOY2 106 aa16.56■□□□□ 0.24
TSPAN3-202ENST00000346495 MYCNOSP40205 109 aa16.56■□□□□ 0.24
TSPAN3-202ENST00000346495 AKR1C3P42330 323 aa16.56■□□□□ 0.24
TSPAN3-202ENST00000346495 TMEM88Q6PEY1 159 aa16.56■□□□□ 0.24
TSPAN3-202ENST00000346495 CLDN34H7C241 214 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms