RNA–Protein interactions for RNA: ENST00000346416.6

CDK5RAP1-202, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP1, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-202ENST00000346416 FOXL1Q12952 345 aa11.08□□□□□ -0.64
CDK5RAP1-202ENST00000346416 ZNF600Q6ZNG1 722 aa11.08□□□□□ -0.64
CDK5RAP1-202ENST00000346416 ZNF491Q8N8L2 437 aa11.08□□□□□ -0.64
CDK5RAP1-202ENST00000346416 ZNF48Q96MX3 618 aaPredicted RBP11.08□□□□□ -0.64
CDK5RAP1-202ENST00000346416 GAR1Q9NY12 217 aaKnown RBP11.08□□□□□ -0.64
CDK5RAP1-202ENST00000346416 C21orf62Q9NYP8 219 aa11.08□□□□□ -0.64
CDK5RAP1-202ENST00000346416 A0A0U1RQK1 487 aa11.08□□□□□ -0.64
CDK5RAP1-202ENST00000346416 PEX7O00628 323 aa11.08□□□□□ -0.64
CDK5RAP1-202ENST00000346416 ATP6V0E1O15342 81 aa11.08□□□□□ -0.64
CDK5RAP1-202ENST00000346416 IL4P05112 153 aa11.08□□□□□ -0.64
CDK5RAP1-202ENST00000346416 ECSCRQ19T08 205 aa11.08□□□□□ -0.64
CDK5RAP1-202ENST00000346416 Q56UQ5 140 aa11.08□□□□□ -0.64
CDK5RAP1-202ENST00000346416 RNF125Q96EQ8 232 aa11.08□□□□□ -0.64
CDK5RAP1-202ENST00000346416 IGF2BP2-AS1Q96M15 143 aa11.08□□□□□ -0.64
CDK5RAP1-202ENST00000346416 NIT2Q9NQR4 276 aa11.08□□□□□ -0.64
CDK5RAP1-202ENST00000346416 CDC42EP3Q9UKI2 254 aa11.08□□□□□ -0.64
CDK5RAP1-202ENST00000346416 PTPN13Q12923 2485 aa11.07□□□□□ -0.64
CDK5RAP1-202ENST00000346416 PGPA6NDG6 321 aa11.07□□□□□ -0.64
CDK5RAP1-202ENST00000346416 SH2D7A6NKC9 451 aaPredicted RBP11.07□□□□□ -0.64
CDK5RAP1-202ENST00000346416 H3BTX0 84 aa11.07□□□□□ -0.64
CDK5RAP1-202ENST00000346416 SLC17A3O00476 420 aa11.07□□□□□ -0.64
CDK5RAP1-202ENST00000346416 IGLV2-8P01709 118 aa11.07□□□□□ -0.64
CDK5RAP1-202ENST00000346416 IGHV3-23P01764 117 aa11.07□□□□□ -0.64
CDK5RAP1-202ENST00000346416 IGHV4-38-2P0DP08 117 aa11.07□□□□□ -0.64
CDK5RAP1-202ENST00000346416 CNN1P51911 297 aaKnown RBP11.07□□□□□ -0.64
CDK5RAP1-202ENST00000346416 ERVFC1-1P60608 527 aa11.07□□□□□ -0.64
CDK5RAP1-202ENST00000346416 YPEL3P61236 119 aaPredicted RBP11.07□□□□□ -0.64
CDK5RAP1-202ENST00000346416 UNQ5815/PRO19632Q6UWF5 114 aa11.07□□□□□ -0.64
CDK5RAP1-202ENST00000346416 TMEM219Q86XT9 240 aa11.07□□□□□ -0.64
CDK5RAP1-202ENST00000346416 BTF3L4Q96K17 158 aa11.07□□□□□ -0.64
CDK5RAP1-202ENST00000346416 C7orf69Q9H7B7 122 aa11.07□□□□□ -0.64
CDK5RAP1-202ENST00000346416 LINC01548A6NM66 108 aa11.06□□□□□ -0.64
CDK5RAP1-202ENST00000346416 TYMSP04818 313 aa11.06□□□□□ -0.64
CDK5RAP1-202ENST00000346416 PAX1P15863 534 aa11.06□□□□□ -0.64
CDK5RAP1-202ENST00000346416 DSCR9P59020 149 aa11.06□□□□□ -0.64
CDK5RAP1-202ENST00000346416 TAS2R60P59551 318 aa11.06□□□□□ -0.64
CDK5RAP1-202ENST00000346416 GNG5P63218 68 aa11.06□□□□□ -0.64
CDK5RAP1-202ENST00000346416 C5orf56Q8N8D9 126 aa11.06□□□□□ -0.64
CDK5RAP1-202ENST00000346416 FAM110DQ8TAY7 271 aaPredicted RBP11.06□□□□□ -0.64
CDK5RAP1-202ENST00000346416 SHANK2-AS3Q9BTD1 123 aa11.06□□□□□ -0.64
CDK5RAP1-202ENST00000346416 TMEM14CQ9P0S9 112 aa11.06□□□□□ -0.64
CDK5RAP1-202ENST00000346416 FBXL7Q9UJT9 491 aa11.06□□□□□ -0.64
CDK5RAP1-202ENST00000346416 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.06□□□□□ -0.642e-7■■■■□ 21.8
CDK5RAP1-202ENST00000346416 WI2-2373I1.2A0A1W2PRP0 233 aa11.06□□□□□ -0.64
CDK5RAP1-202ENST00000346416 SLC25A5P05141 298 aaKnown RBP11.06□□□□□ -0.64
CDK5RAP1-202ENST00000346416 PIFOQ8TCI5 191 aa11.06□□□□□ -0.64
CDK5RAP1-202ENST00000346416 EPDR1Q9UM22 224 aa11.06□□□□□ -0.64
CDK5RAP1-202ENST00000346416 TRAV34A0A0B4J273 112 aa11.05□□□□□ -0.64
CDK5RAP1-202ENST00000346416 OR2T8A6NH00 312 aa11.05□□□□□ -0.64
CDK5RAP1-202ENST00000346416 H3BRN7 92 aa11.05□□□□□ -0.64
CDK5RAP1-202ENST00000346416 GCGP01275 180 aa11.05□□□□□ -0.64
CDK5RAP1-202ENST00000346416 MGST1P10620 155 aaKnown RBP11.05□□□□□ -0.64
CDK5RAP1-202ENST00000346416 NHLRC2Q8NBF2 726 aa11.05□□□□□ -0.64
CDK5RAP1-202ENST00000346416 RNASE7Q9H1E1 156 aaKnown RBP11.05□□□□□ -0.64
CDK5RAP1-202ENST00000346416 MEGF9Q9H1U4 602 aa11.05□□□□□ -0.64
CDK5RAP1-202ENST00000346416 HIF1ANQ9NWT6 349 aa11.05□□□□□ -0.64
CDK5RAP1-202ENST00000346416 ZNF586Q9NXT0 402 aa11.05□□□□□ -0.64
CDK5RAP1-202ENST00000346416 ZNF320A2RRD8 509 aa11.05□□□□□ -0.64
CDK5RAP1-202ENST00000346416 IFITM10A6NMD0 228 aa11.05□□□□□ -0.64
CDK5RAP1-202ENST00000346416 B4DSR2 109 aa11.05□□□□□ -0.64
CDK5RAP1-202ENST00000346416 G3V318 75 aa11.05□□□□□ -0.64
CDK5RAP1-202ENST00000346416 ISLRO14498 428 aa11.05□□□□□ -0.64
CDK5RAP1-202ENST00000346416 HIST1H1EP10412 219 aaKnown RBP11.05□□□□□ -0.64
CDK5RAP1-202ENST00000346416 HIST1H1BP16401 226 aaKnown RBP11.05□□□□□ -0.64
CDK5RAP1-202ENST00000346416 USF2Q15853 346 aaPredicted RBP11.05□□□□□ -0.64
CDK5RAP1-202ENST00000346416 HIST3H2BBQ8N257 126 aa11.05□□□□□ -0.64
CDK5RAP1-202ENST00000346416 TMEM68Q96MH6 324 aa11.05□□□□□ -0.64
CDK5RAP1-202ENST00000346416 Q9H3A6 140 aa11.05□□□□□ -0.64
CDK5RAP1-202ENST00000346416 IL36BQ9NZH7 164 aa11.05□□□□□ -0.64
CDK5RAP1-202ENST00000346416 PITPNC1Q9UKF7 332 aa11.05□□□□□ -0.64
CDK5RAP1-202ENST00000346416 MOB4Q9Y3A3 225 aa11.05□□□□□ -0.64
CDK5RAP1-202ENST00000346416 V9GYV3 84 aa11.05□□□□□ -0.64
CDK5RAP1-202ENST00000346416 CTSGP08311 255 aa11.04□□□□□ -0.64
CDK5RAP1-202ENST00000346416 BPIFA4PQ86YQ2 179 aa11.04□□□□□ -0.64
CDK5RAP1-202ENST00000346416 BCL6BQ8N143 479 aaPredicted RBP11.04□□□□□ -0.64
CDK5RAP1-202ENST00000346416 SOX21Q9Y651 276 aaPredicted RBP11.04□□□□□ -0.64
CDK5RAP1-202ENST00000346416 ABCA12Q86UK0 2595 aa11.04□□□□□ -0.64
CDK5RAP1-202ENST00000346416 FCGR2BP31994 310 aaPredicted RBP11.03□□□□□ -0.64
CDK5RAP1-202ENST00000346416 C15orf32Q32M92 178 aa11.03□□□□□ -0.64
CDK5RAP1-202ENST00000346416 BAGE2Q86Y30 109 aa11.03□□□□□ -0.64
CDK5RAP1-202ENST00000346416 C5orf17Q8NAS9 161 aa11.03□□□□□ -0.64
CDK5RAP1-202ENST00000346416 OSTCQ9NRP0 149 aa11.03□□□□□ -0.64
CDK5RAP1-202ENST00000346416 RPH3ALQ9UNE2 315 aa11.03□□□□□ -0.64
CDK5RAP1-202ENST00000346416 CSPG4Q6UVK1 2322 aa11.03□□□□□ -0.64
CDK5RAP1-202ENST00000346416 AMY1AP04745 511 aa11.03□□□□□ -0.64
CDK5RAP1-202ENST00000346416 SLC25A16P16260 332 aa11.03□□□□□ -0.64
CDK5RAP1-202ENST00000346416 RHOGP84095 191 aa11.03□□□□□ -0.64
CDK5RAP1-202ENST00000346416 TMEM183BQ1AE95 376 aa11.03□□□□□ -0.64
CDK5RAP1-202ENST00000346416 KLK9Q2XQG4 91 aa11.03□□□□□ -0.64
CDK5RAP1-202ENST00000346416 IBA57Q5T440 356 aaKnown RBP11.03□□□□□ -0.64
CDK5RAP1-202ENST00000346416 VN1R17PQ8TDU5 208 aa11.03□□□□□ -0.64
CDK5RAP1-202ENST00000346416 TXN2Q99757 166 aa11.03□□□□□ -0.64
CDK5RAP1-202ENST00000346416 ATG101Q9BSB4 218 aa11.03□□□□□ -0.64
CDK5RAP1-202ENST00000346416 KLK9Q9UKQ9 250 aa11.03□□□□□ -0.64
CDK5RAP1-202ENST00000346416 TRBV9A0A0B4J1U6 114 aa11.02□□□□□ -0.64
CDK5RAP1-202ENST00000346416 SCGB2A1O75556 95 aa11.02□□□□□ -0.64
CDK5RAP1-202ENST00000346416 AVPP01185 164 aa11.02□□□□□ -0.64
CDK5RAP1-202ENST00000346416 UBE2G1P62253 170 aa11.02□□□□□ -0.64
CDK5RAP1-202ENST00000346416 RPEL1Q2QD12 228 aa11.02□□□□□ -0.64
CDK5RAP1-202ENST00000346416 ACTL10Q5JWF8 245 aa11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms