RNA–Protein interactions for RNA: ENST00000346162.10

SRPK1-201, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 4,762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-201ENST00000346162 PSMB11A5LHX3 300 aa12.76□□□□□ -0.37
SRPK1-201ENST00000346162 AREGP15514 252 aa12.76□□□□□ -0.37
SRPK1-201ENST00000346162 CCL3L1P16619 93 aa12.76□□□□□ -0.37
SRPK1-201ENST00000346162 MFAP4P55083 255 aa12.76□□□□□ -0.37
SRPK1-201ENST00000346162 CFAP161Q6P656 301 aa12.76□□□□□ -0.37
SRPK1-201ENST00000346162 TREML4Q6UXN2 200 aa12.76□□□□□ -0.37
SRPK1-201ENST00000346162 TEX48A0A1B0GUV7 120 aa12.76□□□□□ -0.37
SRPK1-201ENST00000346162 LEPP41159 167 aa12.76□□□□□ -0.37
SRPK1-201ENST00000346162 DGAT2L7PQ6IED9 249 aa12.76□□□□□ -0.37
SRPK1-201ENST00000346162 ZCCHC24Q8N2G6 241 aaKnown RBP12.76□□□□□ -0.37
SRPK1-201ENST00000346162 MDS2Q8NDY4 140 aa12.76□□□□□ -0.37
SRPK1-201ENST00000346162 VKORC1Q9BQB6 163 aa12.76□□□□□ -0.37
SRPK1-201ENST00000346162 MRPL20Q9BYC9 149 aaKnown RBP12.76□□□□□ -0.37
SRPK1-201ENST00000346162 GAGE5Q13069 117 aa12.75□□□□□ -0.37
SRPK1-201ENST00000346162 GAGE6Q13070 117 aa12.75□□□□□ -0.37
SRPK1-201ENST00000346162 SAA2-SAA4A0A096LPE2 208 aa12.75□□□□□ -0.37
SRPK1-201ENST00000346162 A0A0G2JRQ6 117 aa12.75□□□□□ -0.37
SRPK1-201ENST00000346162 GFRA3O60609 400 aa12.75□□□□□ -0.37
SRPK1-201ENST00000346162 SAA2P0DJI9 122 aaPredicted RBP12.75□□□□□ -0.37
SRPK1-201ENST00000346162 SPATA31B1PQ5VZV4 182 aa12.75□□□□□ -0.37
SRPK1-201ENST00000346162 GTSCR1Q86UQ5 136 aa12.75□□□□□ -0.37
SRPK1-201ENST00000346162 KIR3DL3Q8N743 410 aa12.75□□□□□ -0.37
SRPK1-201ENST00000346162 F8W1H4 67 aa12.75□□□□□ -0.37
SRPK1-201ENST00000346162 IGKV1-5P01602 117 aa12.75□□□□□ -0.37
SRPK1-201ENST00000346162 DUTP33316 252 aaKnown RBP12.75□□□□□ -0.37
SRPK1-201ENST00000346162 CRYBA4P53673 196 aa12.75□□□□□ -0.37
SRPK1-201ENST00000346162 RCHY1Q96PM5 261 aa12.75□□□□□ -0.37
SRPK1-201ENST00000346162 RPL15P61313 204 aaKnown RBP12.74□□□□□ -0.37
SRPK1-201ENST00000346162 USF3Q68DE3 2245 aa12.74□□□□□ -0.37
SRPK1-201ENST00000346162 IGKCP01834 107 aa12.74□□□□□ -0.37
SRPK1-201ENST00000346162 Q6ZRM9 215 aa12.74□□□□□ -0.37
SRPK1-201ENST00000346162 RABAC1Q9UI14 185 aa12.74□□□□□ -0.37
SRPK1-201ENST00000346162 ANAPC10Q9UM13 185 aa12.74□□□□□ -0.37
SRPK1-201ENST00000346162 LY6G6EA0A0G2JKS1 128 aa12.74□□□□□ -0.37
SRPK1-201ENST00000346162 TMEM170BQ5T4T1 132 aa12.74□□□□□ -0.37
SRPK1-201ENST00000346162 U3KQA8 63 aa12.74□□□□□ -0.37
SRPK1-201ENST00000346162 SRRM5B3KS81 715 aa12.74□□□□□ -0.37
SRPK1-201ENST00000346162 ZNF114Q8NC26 417 aa12.74□□□□□ -0.37
SRPK1-201ENST00000346162 PYYP10082 97 aa12.73□□□□□ -0.37
SRPK1-201ENST00000346162 TMEM78Q5T7P6 136 aa12.73□□□□□ -0.37
SRPK1-201ENST00000346162 CIARTQ8N365 385 aaPredicted RBP12.73□□□□□ -0.37
SRPK1-201ENST00000346162 FBXL15Q9H469 300 aa12.73□□□□□ -0.37
SRPK1-201ENST00000346162 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.73□□□□□ -0.37
SRPK1-201ENST00000346162 SSBP2P81877 361 aaPredicted RBP12.73□□□□□ -0.37
SRPK1-201ENST00000346162 SLAQ13239 276 aa12.73□□□□□ -0.37
SRPK1-201ENST00000346162 C1orf147Q96MC9 270 aaPredicted RBP12.73□□□□□ -0.37
SRPK1-201ENST00000346162 SPANXA1Q9NS26 97 aa12.73□□□□□ -0.37
SRPK1-201ENST00000346162 LOXL3P58215 753 aa12.73□□□□□ -0.37
SRPK1-201ENST00000346162 ASCL4Q6XD76 172 aa12.73□□□□□ -0.37
SRPK1-201ENST00000346162 PCNX2A6NKB5 2137 aa12.72□□□□□ -0.37
SRPK1-201ENST00000346162 BOD1L2Q8IYS8 172 aa12.72□□□□□ -0.37
SRPK1-201ENST00000346162 EPDR1Q9UM22 224 aa12.72□□□□□ -0.37
SRPK1-201ENST00000346162 DENND4CQ5VZ89 1909 aa12.72□□□□□ -0.37
SRPK1-201ENST00000346162 SAA1P0DJI8 122 aaPredicted RBP12.72□□□□□ -0.37
SRPK1-201ENST00000346162 COX8AP10176 69 aa12.72□□□□□ -0.37
SRPK1-201ENST00000346162 CHAC1Q9BUX1 264 aa12.72□□□□□ -0.37
SRPK1-201ENST00000346162 DPM3Q9P2X0 92 aa12.72□□□□□ -0.37
SRPK1-201ENST00000346162 C15orf61A6NNL5 157 aa12.72□□□□□ -0.37
SRPK1-201ENST00000346162 FXYD7P58549 80 aa12.72□□□□□ -0.37
SRPK1-201ENST00000346162 C1orf122Q6ZSJ8 110 aa12.72□□□□□ -0.37
SRPK1-201ENST00000346162 NPIPB11E5RHQ5 1161 aa12.72□□□□□ -0.37
SRPK1-201ENST00000346162 UPK2O00526 184 aa12.72□□□□□ -0.37
SRPK1-201ENST00000346162 TMEM155Q4W5P6 130 aa12.72□□□□□ -0.37
SRPK1-201ENST00000346162 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.72□□□□□ -0.37
SRPK1-201ENST00000346162 OR13C6PQ8NH95 151 aa12.72□□□□□ -0.37
SRPK1-201ENST00000346162 SCGB3A1Q96QR1 104 aa12.72□□□□□ -0.37
SRPK1-201ENST00000346162 SLC25A2Q9BXI2 301 aa12.72□□□□□ -0.37
SRPK1-201ENST00000346162 FAM90A9PA6NNJ1 464 aa12.71□□□□□ -0.37
SRPK1-201ENST00000346162 FOXH1O75593 365 aa12.71□□□□□ -0.37
SRPK1-201ENST00000346162 TOMM40O96008 361 aa12.71□□□□□ -0.37
SRPK1-201ENST00000346162 PROK2Q9HC23 129 aa12.71□□□□□ -0.37
SRPK1-201ENST00000346162 GAGE12JA6NER3 117 aa12.71□□□□□ -0.37
SRPK1-201ENST00000346162 GAGE7O76087 117 aa12.71□□□□□ -0.37
SRPK1-201ENST00000346162 GAGE12FP0CL80 117 aa12.71□□□□□ -0.37
SRPK1-201ENST00000346162 GAGE12GP0CL81 117 aa12.71□□□□□ -0.37
SRPK1-201ENST00000346162 GAGE12IP0CL82 117 aa12.71□□□□□ -0.37
SRPK1-201ENST00000346162 GAGE4Q13068 117 aa12.71□□□□□ -0.37
SRPK1-201ENST00000346162 RPRMLQ8N4K4 120 aa12.71□□□□□ -0.37
SRPK1-201ENST00000346162 PGPEP1Q9NXJ5 209 aa12.71□□□□□ -0.37
SRPK1-201ENST00000346162 DOCK10Q96BY6 2186 aa12.71□□□□□ -0.38
SRPK1-201ENST00000346162 IGHV4-39P01824 125 aa12.71□□□□□ -0.38
SRPK1-201ENST00000346162 PAX9P55771 341 aa12.71□□□□□ -0.38
SRPK1-201ENST00000346162 OR5AN1Q8NGI8 311 aa12.71□□□□□ -0.38
SRPK1-201ENST00000346162 IGHV3-35A0A0C4DH35 117 aa12.7□□□□□ -0.38
SRPK1-201ENST00000346162 H3BMG7 143 aa12.7□□□□□ -0.38
SRPK1-201ENST00000346162 IGKV1D-33P01593 117 aa12.7□□□□□ -0.38
SRPK1-201ENST00000346162 IGKV1-33P01594 117 aa12.7□□□□□ -0.38
SRPK1-201ENST00000346162 CYYR1Q96J86 154 aa12.7□□□□□ -0.38
SRPK1-201ENST00000346162 VGLL1Q99990 258 aa12.7□□□□□ -0.38
SRPK1-201ENST00000346162 TRBV6-6A0A0A6YYG2 114 aa12.7□□□□□ -0.38
SRPK1-201ENST00000346162 LINC01559Q495D7 138 aa12.7□□□□□ -0.38
SRPK1-201ENST00000346162 ARPC1AQ92747 370 aa12.7□□□□□ -0.38
SRPK1-201ENST00000346162 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.7□□□□□ -0.383e-8■■■□□ 15.7
SRPK1-201ENST00000346162 IGHV1-46P01743 117 aa12.7□□□□□ -0.38
SRPK1-201ENST00000346162 ANXA2RQ3ZCQ2 193 aa12.7□□□□□ -0.38
SRPK1-201ENST00000346162 KLF17Q5JT82 389 aaPredicted RBP12.7□□□□□ -0.38
SRPK1-201ENST00000346162 PF4V1P10720 104 aa12.69□□□□□ -0.38
SRPK1-201ENST00000346162 ZC2HC1BQ5TFG8 222 aa12.69□□□□□ -0.38
SRPK1-201ENST00000346162 Q6ZS49 121 aa12.69□□□□□ -0.38
SRPK1-201ENST00000346162 METTL26Q96S19 204 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms