RNA–Protein interactions for RNA: ENST00000345512.7

PTPRU-201, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRU, Length 4,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-201ENST00000345512 PSG8Q9UQ74 426 aa12.62□□□□□ -0.39
PTPRU-201ENST00000345512 PSG9Q00887 426 aa12.61□□□□□ -0.39
PTPRU-201ENST00000345512 SAPCD1Q5SSQ6 148 aa12.61□□□□□ -0.39
PTPRU-201ENST00000345512 MKI67P46013 3256 aaKnown RBP12.61□□□□□ -0.39
PTPRU-201ENST00000345512 MBD3L4A6NDZ8 208 aaPredicted RBP12.61□□□□□ -0.39
PTPRU-201ENST00000345512 MBD3L3A6NE82 208 aaPredicted RBP12.61□□□□□ -0.39
PTPRU-201ENST00000345512 MBD3L5A6NJ08 208 aaPredicted RBP12.61□□□□□ -0.39
PTPRU-201ENST00000345512 FABP2P12104 132 aa12.61□□□□□ -0.39
PTPRU-201ENST00000345512 MBD3L2Q8NHZ7 208 aaPredicted RBP12.61□□□□□ -0.39
PTPRU-201ENST00000345512 LINC01560Q8TB33 94 aa12.61□□□□□ -0.39
PTPRU-201ENST00000345512 RABAC1Q9UI14 185 aa12.61□□□□□ -0.39
PTPRU-201ENST00000345512 APOBEC3AP31941 199 aaPredicted RBP12.6□□□□□ -0.39
PTPRU-201ENST00000345512 TM4SF20Q53R12 229 aa12.6□□□□□ -0.39
PTPRU-201ENST00000345512 ORMDL3Q8N138 153 aa12.6□□□□□ -0.39
PTPRU-201ENST00000345512 C7orf71A4D174 169 aa12.6□□□□□ -0.39
PTPRU-201ENST00000345512 B9A039 149 aa12.6□□□□□ -0.39
PTPRU-201ENST00000345512 RPS20P60866 119 aaKnown RBP12.6□□□□□ -0.39
PTPRU-201ENST00000345512 TMEM78Q5T7P6 136 aa12.6□□□□□ -0.39
PTPRU-201ENST00000345512 RPRMLQ8N4K4 120 aa12.6□□□□□ -0.39
PTPRU-201ENST00000345512 RNF125Q96EQ8 232 aa12.6□□□□□ -0.39
PTPRU-201ENST00000345512 NDUFA4L2Q9NRX3 87 aa12.6□□□□□ -0.39
PTPRU-201ENST00000345512 DPM3Q9P2X0 92 aa12.6□□□□□ -0.39
PTPRU-201ENST00000345512 LRP4O75096 1905 aa12.6□□□□□ -0.39
PTPRU-201ENST00000345512 F5H697 171 aa12.6□□□□□ -0.39
PTPRU-201ENST00000345512 SYS1-DBNDD2H3BUS1 97 aa12.6□□□□□ -0.39
PTPRU-201ENST00000345512 LDLRAD2Q5SZI1 272 aa12.6□□□□□ -0.39
PTPRU-201ENST00000345512 IGLV1-44P01699 117 aa12.59□□□□□ -0.39
PTPRU-201ENST00000345512 FRMD6-AS1P0C7T7 363 aa12.59□□□□□ -0.39
PTPRU-201ENST00000345512 DAZAP2Q15038 168 aaPredicted RBP12.59□□□□□ -0.39
PTPRU-201ENST00000345512 SCGB1D4Q6XE38 83 aa12.59□□□□□ -0.39
PTPRU-201ENST00000345512 SPACA3Q8IXA5 215 aa12.59□□□□□ -0.39
PTPRU-201ENST00000345512 FAM168AQ92567 244 aa12.59□□□□□ -0.39
PTPRU-201ENST00000345512 RNASE6Q93091 150 aaKnown RBP12.59□□□□□ -0.39
PTPRU-201ENST00000345512 TRGV9Q99603 122 aa12.59□□□□□ -0.39
PTPRU-201ENST00000345512 SLC25A2Q9BXI2 301 aa12.59□□□□□ -0.39
PTPRU-201ENST00000345512 A0A1W2PPI3 338 aa12.59□□□□□ -0.39
PTPRU-201ENST00000345512 CCL21O00585 134 aa12.59□□□□□ -0.39
PTPRU-201ENST00000345512 Q6AWC8 147 aa12.59□□□□□ -0.39
PTPRU-201ENST00000345512 SMIM27A0A1W2PRY6 76 aa12.59□□□□□ -0.39
PTPRU-201ENST00000345512 CFHR2P36980 270 aa12.59□□□□□ -0.39
PTPRU-201ENST00000345512 OR5AN1Q8NGI8 311 aa12.59□□□□□ -0.39
PTPRU-201ENST00000345512 SLC25A39Q9BZJ4 359 aaPredicted RBP12.59□□□□□ -0.39
PTPRU-201ENST00000345512 TMEM178BH3BS89 294 aa12.58□□□□□ -0.39
PTPRU-201ENST00000345512 BRWD1-AS2P59051 145 aa12.58□□□□□ -0.39
PTPRU-201ENST00000345512 PLP1P60201 277 aa12.58□□□□□ -0.39
PTPRU-201ENST00000345512 IGHV1-8P0DP01 117 aa12.58□□□□□ -0.4
PTPRU-201ENST00000345512 LYPD2Q6UXB3 125 aa12.58□□□□□ -0.4
PTPRU-201ENST00000345512 FAM169BQ8N8A8 192 aa12.58□□□□□ -0.4
PTPRU-201ENST00000345512 A0A1B0GW15 77 aa12.58□□□□□ -0.4
PTPRU-201ENST00000345512 WT1-ASQ06250 92 aa12.58□□□□□ -0.4
PTPRU-201ENST00000345512 UBE2V1Q13404 147 aa12.58□□□□□ -0.4
PTPRU-201ENST00000345512 Q8TCH9 128 aa12.58□□□□□ -0.4
PTPRU-201ENST00000345512 ASCL2Q99929 193 aa12.58□□□□□ -0.4
PTPRU-201ENST00000345512 C21orf62Q9NYP8 219 aa12.58□□□□□ -0.4
PTPRU-201ENST00000345512 SELENOKQ9Y6D0 94 aa12.58□□□□□ -0.4
PTPRU-201ENST00000345512 ZGRF1Q86YA3 2104 aa12.58□□□□□ -0.4
PTPRU-201ENST00000345512 P0C879 139 aa12.58□□□□□ -0.4
PTPRU-201ENST00000345512 AMMECR1LQ6DCA0 310 aa12.57□□□□□ -0.4
PTPRU-201ENST00000345512 STPG4Q8N801 248 aa12.57□□□□□ -0.4
PTPRU-201ENST00000345512 ORAOV1Q8WV07 137 aa12.57□□□□□ -0.4
PTPRU-201ENST00000345512 MGPP08493 103 aa12.57□□□□□ -0.4
PTPRU-201ENST00000345512 ABHD17AQ96GS6 310 aa12.57□□□□□ -0.4
PTPRU-201ENST00000345512 MRPS16Q9Y3D3 137 aaKnown RBP12.57□□□□□ -0.4
PTPRU-201ENST00000345512 CACNG7P62955 275 aa12.57□□□□□ -0.4
PTPRU-201ENST00000345512 SPRNQ5BIV9 151 aa12.57□□□□□ -0.4
PTPRU-201ENST00000345512 FER1L6-AS1Q8NA97 138 aa12.57□□□□□ -0.4
PTPRU-201ENST00000345512 A0A087X0K7 114 aa12.56□□□□□ -0.4
PTPRU-201ENST00000345512 IGHV3-49A0A0A0MS15 119 aa12.56□□□□□ -0.4
PTPRU-201ENST00000345512 MAJINQ3KP22 176 aa12.56□□□□□ -0.4
PTPRU-201ENST00000345512 TOMM40O96008 361 aa12.56□□□□□ -0.4
PTPRU-201ENST00000345512 HIST1H1AQ02539 215 aaPredicted RBP12.56□□□□□ -0.4
PTPRU-201ENST00000345512 LOC105371242A0A075B767 164 aa12.56□□□□□ -0.4
PTPRU-201ENST00000345512 H3BUT2 72 aa12.56□□□□□ -0.4
PTPRU-201ENST00000345512 IGLL1P15814 213 aa12.56□□□□□ -0.4
PTPRU-201ENST00000345512 KLK15Q9H2R5 256 aa12.56□□□□□ -0.4
PTPRU-201ENST00000345512 IGHV2-26A0A0B4J1V2 119 aa12.56□□□□□ -0.4
PTPRU-201ENST00000345512 IGHV3-66A0A0C4DH42 116 aa12.56□□□□□ -0.4
PTPRU-201ENST00000345512 TIMM23O14925 209 aa12.56□□□□□ -0.4
PTPRU-201ENST00000345512 COX11Q9Y6N1 276 aa12.56□□□□□ -0.4
PTPRU-201ENST00000345512 SCGB1C2P0DMR2 95 aa12.55□□□□□ -0.4
PTPRU-201ENST00000345512 SRSF9Q13242 221 aaKnown RBP eCLIP12.55□□□□□ -0.4
PTPRU-201ENST00000345512 POU2AF1Q16633 256 aa12.55□□□□□ -0.4
PTPRU-201ENST00000345512 KLF17Q5JT82 389 aaPredicted RBP12.55□□□□□ -0.4
PTPRU-201ENST00000345512 GATA4P43694 442 aa12.55□□□□□ -0.4
PTPRU-201ENST00000345512 ADIPOQQ15848 244 aa12.55□□□□□ -0.4
PTPRU-201ENST00000345512 FNDC4Q9H6D8 234 aaPredicted RBP12.55□□□□□ -0.4
PTPRU-201ENST00000345512 ZFHX2Q9C0A1 2572 aaPredicted RBP12.55□□□□□ -0.4
PTPRU-201ENST00000345512 NBR2O15453 112 aa12.55□□□□□ -0.4
PTPRU-201ENST00000345512 PROP1O75360 226 aa12.55□□□□□ -0.4
PTPRU-201ENST00000345512 PVRIGQ6DKI7 326 aa12.55□□□□□ -0.4
PTPRU-201ENST00000345512 FAM231DQ6ZW35 169 aa12.55□□□□□ -0.4
PTPRU-201ENST00000345512 TMEM160Q9NX00 188 aa12.55□□□□□ -0.4
PTPRU-201ENST00000345512 SIGLEC9Q9Y336 463 aa12.55□□□□□ -0.4
PTPRU-201ENST00000345512 FAM106CPP0CH98 169 aa12.54□□□□□ -0.4
PTPRU-201ENST00000345512 FXYD7P58549 80 aa12.54□□□□□ -0.4
PTPRU-201ENST00000345512 NCOR1P1Q9H4R4 102 aa12.54□□□□□ -0.4
PTPRU-201ENST00000345512 TRAV8-6A0A0B4J262 113 aa12.54□□□□□ -0.4
PTPRU-201ENST00000345512 M0R3E3 92 aa12.54□□□□□ -0.4
PTPRU-201ENST00000345512 SSBP2P81877 361 aaPredicted RBP12.54□□□□□ -0.4
PTPRU-201ENST00000345512 C16orf92Q96LL3 132 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms