RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 SLC45A2Q9UMX9 530 aa8.95□□□□□ -0.98
SNCA-202ENST00000345009 IGHV3-49A0A0A0MS15 119 aa8.94□□□□□ -0.98
SNCA-202ENST00000345009 UBE2L5PA0A1B0GUS4 154 aa8.94□□□□□ -0.98
SNCA-202ENST00000345009 HELTA6NFD8 242 aa8.94□□□□□ -0.98
SNCA-202ENST00000345009 HYPMO75409 117 aa8.94□□□□□ -0.98
SNCA-202ENST00000345009 IFNA5P01569 189 aa8.94□□□□□ -0.98
SNCA-202ENST00000345009 ORM2P19652 201 aa8.94□□□□□ -0.98
SNCA-202ENST00000345009 CAMLGP49069 296 aa8.94□□□□□ -0.98
SNCA-202ENST00000345009 CMC4P56277 68 aaPredicted RBP8.94□□□□□ -0.98
SNCA-202ENST00000345009 KRTAP10-11P60412 298 aa8.94□□□□□ -0.98
SNCA-202ENST00000345009 CDPF1Q6NVV7 123 aa8.94□□□□□ -0.98
SNCA-202ENST00000345009 Q6ZNX1 250 aa8.94□□□□□ -0.98
SNCA-202ENST00000345009 Q6ZRG5 221 aa8.94□□□□□ -0.98
SNCA-202ENST00000345009 SCGB1C1Q8TD33 95 aa8.94□□□□□ -0.98
SNCA-202ENST00000345009 SPAG8Q99932 426 aaPredicted RBP8.94□□□□□ -0.98
SNCA-202ENST00000345009 VSIRQ9H7M9 311 aa8.94□□□□□ -0.98
SNCA-202ENST00000345009 KCNIP2Q9NS61 270 aa8.94□□□□□ -0.98
SNCA-202ENST00000345009 FBXL17Q9UF56 701 aa8.94□□□□□ -0.98
SNCA-202ENST00000345009 WDR83OSQ9Y284 106 aa8.94□□□□□ -0.98
SNCA-202ENST00000345009 LSM4Q9Y4Z0 139 aaKnown RBP8.94□□□□□ -0.98
SNCA-202ENST00000345009 HSPB11Q9Y547 144 aa8.94□□□□□ -0.98
SNCA-202ENST00000345009 MEGF8Q7Z7M0 2845 aa8.94□□□□□ -0.98
SNCA-202ENST00000345009 IGHV3OR16-13A0A075B7E8 117 aa8.93□□□□□ -0.98
SNCA-202ENST00000345009 IGHV3-74A0A0B4J1X5 117 aa8.93□□□□□ -0.98
SNCA-202ENST00000345009 OR4C46A6NHA9 309 aa8.93□□□□□ -0.98
SNCA-202ENST00000345009 TSPAN4O14817 238 aa8.93□□□□□ -0.98
SNCA-202ENST00000345009 AGPAT2O15120 278 aa8.93□□□□□ -0.98
SNCA-202ENST00000345009 LINC00869P0C866 280 aa8.93□□□□□ -0.98
SNCA-202ENST00000345009 FGF7P21781 194 aa8.93□□□□□ -0.98
SNCA-202ENST00000345009 CLINT1Q14677 625 aa8.93□□□□□ -0.98
SNCA-202ENST00000345009 USF2Q15853 346 aaPredicted RBP8.93□□□□□ -0.98
SNCA-202ENST00000345009 C1orf194Q5T5A4 169 aa8.93□□□□□ -0.98
SNCA-202ENST00000345009 TCF24Q7RTU0 167 aa8.93□□□□□ -0.98
SNCA-202ENST00000345009 TMEM61Q8N0U2 210 aa8.93□□□□□ -0.98
SNCA-202ENST00000345009 OR1B1Q8NGR6 318 aa8.93□□□□□ -0.98
SNCA-202ENST00000345009 CHAC2Q8WUX2 184 aa8.93□□□□□ -0.98
SNCA-202ENST00000345009 RNF2Q99496 336 aa8.93□□□□□ -0.98
SNCA-202ENST00000345009 ATP5SQ99766 215 aa8.93□□□□□ -0.98
SNCA-202ENST00000345009 AURKAIP1Q9NWT8 199 aaPredicted RBP8.93□□□□□ -0.98
SNCA-202ENST00000345009 FXYD6-FXYD2A0A087WZ82 144 aa8.92□□□□□ -0.98
SNCA-202ENST00000345009 KRTAP9-6A0A140TA67 174 aa8.92□□□□□ -0.98
SNCA-202ENST00000345009 C17orf112F2Z3M2 114 aa8.92□□□□□ -0.98
SNCA-202ENST00000345009 DNASE2O00115 360 aaPredicted RBP8.92□□□□□ -0.98
SNCA-202ENST00000345009 BUB3O43684 328 aa8.92□□□□□ -0.98
SNCA-202ENST00000345009 OR5G3P0C626 314 aa8.92□□□□□ -0.98
SNCA-202ENST00000345009 EDN2P20800 178 aa8.92□□□□□ -0.98
SNCA-202ENST00000345009 DEFB121Q5J5C9 76 aa8.92□□□□□ -0.98
SNCA-202ENST00000345009 ST8SIA2Q92186 375 aa8.92□□□□□ -0.98
SNCA-202ENST00000345009 ZNF414Q96IQ9 312 aa8.92□□□□□ -0.98
SNCA-202ENST00000345009 AQP10Q96PS8 301 aa8.92□□□□□ -0.98
SNCA-202ENST00000345009 PRR25Q96S07 402 aa8.92□□□□□ -0.98
SNCA-202ENST00000345009 ARL6Q9H0F7 186 aa8.92□□□□□ -0.98
SNCA-202ENST00000345009 HIGD1AQ9Y241 93 aa8.92□□□□□ -0.98
SNCA-202ENST00000345009 U3KQE9 123 aa8.92□□□□□ -0.98
SNCA-202ENST00000345009 IGHV3-66A0A0C4DH42 116 aa8.91□□□□□ -0.98
SNCA-202ENST00000345009 IZUMO1RA6ND01 250 aa8.91□□□□□ -0.98
SNCA-202ENST00000345009 ZNF785A8K8V0 405 aa8.91□□□□□ -0.98
SNCA-202ENST00000345009 COX7A2P2O60397 106 aa8.91□□□□□ -0.98
SNCA-202ENST00000345009 APOHP02749 345 aaPredicted RBP8.91□□□□□ -0.98
SNCA-202ENST00000345009 GATA2P23769 480 aaPredicted RBP8.91□□□□□ -0.98
SNCA-202ENST00000345009 RPL29P47914 159 aaKnown RBP8.91□□□□□ -0.98
SNCA-202ENST00000345009 PLP1P60201 277 aa8.91□□□□□ -0.98
SNCA-202ENST00000345009 ZNF266Q14584 549 aa8.91□□□□□ -0.98
SNCA-202ENST00000345009 C16orf54Q6UWD8 224 aa8.91□□□□□ -0.98
SNCA-202ENST00000345009 OR8I2Q8N0Y5 310 aa8.91□□□□□ -0.98
SNCA-202ENST00000345009 OR1L4Q8NGR5 311 aa8.91□□□□□ -0.98
SNCA-202ENST00000345009 GPR82Q96P67 336 aa8.91□□□□□ -0.98
SNCA-202ENST00000345009 MGST2Q99735 147 aa8.91□□□□□ -0.98
SNCA-202ENST00000345009 TRAV2A0A0B4J234 112 aa8.9□□□□□ -0.98
SNCA-202ENST00000345009 PRB2P02812 416 aaPredicted RBP8.9□□□□□ -0.98
SNCA-202ENST00000345009 CD81P60033 236 aa8.9□□□□□ -0.98
SNCA-202ENST00000345009 B2MP61769 119 aa8.9□□□□□ -0.98
SNCA-202ENST00000345009 SAMD13Q5VXD3 122 aa8.9□□□□□ -0.98
SNCA-202ENST00000345009 STPG3Q8N7X2 389 aa8.9□□□□□ -0.98
SNCA-202ENST00000345009 MRAPQ8TCY5 172 aa8.9□□□□□ -0.98
SNCA-202ENST00000345009 PFDN5Q99471 154 aa8.9□□□□□ -0.98
SNCA-202ENST00000345009 NEURL2Q9BR09 285 aa8.9□□□□□ -0.98
SNCA-202ENST00000345009 GGTLC1Q9BX51 225 aa8.9□□□□□ -0.98
SNCA-202ENST00000345009 NPCDR1Q9BY65 106 aa8.9□□□□□ -0.98
SNCA-202ENST00000345009 SMIM3Q9BZL3 60 aa8.9□□□□□ -0.98
SNCA-202ENST00000345009 WDR61Q9GZS3 305 aaKnown RBP8.9□□□□□ -0.98
SNCA-202ENST00000345009 DNAJC4Q9NNZ3 241 aa8.9□□□□□ -0.98
SNCA-202ENST00000345009 SMAD5-AS1Q9Y6J3 95 aa8.9□□□□□ -0.98
SNCA-202ENST00000345009 IGKV3-7A0A075B6H7 116 aa8.89□□□□□ -0.99
SNCA-202ENST00000345009 BORCS7-ASMTA0A0B4J1R7 106 aa8.89□□□□□ -0.99
SNCA-202ENST00000345009 ZNF98A6NK75 572 aa8.89□□□□□ -0.99
SNCA-202ENST00000345009 GALR1P47211 349 aa8.89□□□□□ -0.99
SNCA-202ENST00000345009 Q5BKY6 102 aa8.89□□□□□ -0.99
SNCA-202ENST00000345009 C10orf113Q5VZT2 155 aa8.89□□□□□ -0.99
SNCA-202ENST00000345009 FAM90A2PQ658T7 463 aa8.89□□□□□ -0.99
SNCA-202ENST00000345009 SIGLEC15Q6ZMC9 328 aa8.89□□□□□ -0.99
SNCA-202ENST00000345009 TMEM182Q6ZP80 229 aaPredicted RBP8.89□□□□□ -0.99
SNCA-202ENST00000345009 GBGT1Q8N5D6 347 aa8.89□□□□□ -0.99
SNCA-202ENST00000345009 PARD6GQ9BYG4 376 aaPredicted RBP8.89□□□□□ -0.99
SNCA-202ENST00000345009 TUBA4BQ9H853 241 aa8.89□□□□□ -0.99
SNCA-202ENST00000345009 SLC39A9Q9NUM3 307 aa8.89□□□□□ -0.99
SNCA-202ENST00000345009 DOK5Q9P104 306 aa8.89□□□□□ -0.99
SNCA-202ENST00000345009 TNFSF18Q9UNG2 199 aa8.89□□□□□ -0.99
SNCA-202ENST00000345009 SELENOKQ9Y6D0 94 aa8.89□□□□□ -0.99
SNCA-202ENST00000345009 TAAR5O14804 337 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms