RNA–Protein interactions for RNA: ENST00000342409.3

FRMD4A-202, Transcript of FERM domain containing 4A, humanhuman

TSL 2

Gene FRMD4A, Length 1,741 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRMD4A-202ENST00000342409 OR51M1Q9H341 326 aa13.3□□□□□ -0.28
FRMD4A-202ENST00000342409 ARL2-SNX15V9GYD0 113 aa13.3□□□□□ -0.28
FRMD4A-202ENST00000342409 MTORP42345 2549 aa13.3□□□□□ -0.28
FRMD4A-202ENST00000342409 FAM223BA6NKX1 122 aa13.3□□□□□ -0.28
FRMD4A-202ENST00000342409 H3BRN7 92 aa13.3□□□□□ -0.28
FRMD4A-202ENST00000342409 TRGV3P03979 118 aa13.3□□□□□ -0.28
FRMD4A-202ENST00000342409 UBE2L3P68036 154 aaKnown RBP13.3□□□□□ -0.28
FRMD4A-202ENST00000342409 CLEC19AQ6UXS0 136 aa13.3□□□□□ -0.28
FRMD4A-202ENST00000342409 FAM223AQ8IWN6 122 aa13.3□□□□□ -0.28
FRMD4A-202ENST00000342409 EEF1AKMT3Q96AZ1 226 aa13.3□□□□□ -0.28
FRMD4A-202ENST00000342409 ZNF702PQ9H963 129 aa13.3□□□□□ -0.28
FRMD4A-202ENST00000342409 CUBNO60494 3623 aa13.29□□□□□ -0.28
FRMD4A-202ENST00000342409 NF1P21359 2839 aa13.29□□□□□ -0.28
FRMD4A-202ENST00000342409 GGTLC3B5MD39 225 aa13.29□□□□□ -0.28
FRMD4A-202ENST00000342409 H3BUA1 57 aa13.29□□□□□ -0.28
FRMD4A-202ENST00000342409 ATP5G2Q06055 141 aa13.29□□□□□ -0.28
FRMD4A-202ENST00000342409 LCNL1Q6ZST4 164 aa13.29□□□□□ -0.28
FRMD4A-202ENST00000342409 Q8WTZ3 238 aa13.29□□□□□ -0.28
FRMD4A-202ENST00000342409 RPUSD4Q96CM3 377 aaKnown RBP13.29□□□□□ -0.28
FRMD4A-202ENST00000342409 DUX5Q96PT3 197 aa13.29□□□□□ -0.28
FRMD4A-202ENST00000342409 TXNDC17Q9BRA2 123 aa13.29□□□□□ -0.28
FRMD4A-202ENST00000342409 SHANK2-AS3Q9BTD1 123 aa13.29□□□□□ -0.28
FRMD4A-202ENST00000342409 PARLQ9H300 379 aa13.29□□□□□ -0.28
FRMD4A-202ENST00000342409 YAE1D1Q9NRH1 226 aa13.29□□□□□ -0.28
FRMD4A-202ENST00000342409 TRBV7-1A0A0A6YYK4 115 aa13.28□□□□□ -0.28
FRMD4A-202ENST00000342409 SCO2A0A1W2PP80 73 aa13.28□□□□□ -0.28
FRMD4A-202ENST00000342409 PDE6DO43924 150 aa13.28□□□□□ -0.28
FRMD4A-202ENST00000342409 SNRPCP09234 159 aaKnown RBP13.28□□□□□ -0.28
FRMD4A-202ENST00000342409 DERL1Q9BUN8 251 aa13.28□□□□□ -0.28
FRMD4A-202ENST00000342409 ZFAND3Q9H8U3 227 aa13.28□□□□□ -0.28
FRMD4A-202ENST00000342409 IGHV3-35A0A0C4DH35 117 aa13.27□□□□□ -0.28
FRMD4A-202ENST00000342409 C7orf77A4D0Y5 90 aa13.27□□□□□ -0.28
FRMD4A-202ENST00000342409 TGOLN2O43493 480 aa13.27□□□□□ -0.28
FRMD4A-202ENST00000342409 AKR1C3P42330 323 aa13.27□□□□□ -0.28
FRMD4A-202ENST00000342409 TPPP2P59282 170 aa13.27□□□□□ -0.28
FRMD4A-202ENST00000342409 C10orf99Q6UWK7 81 aa13.27□□□□□ -0.28
FRMD4A-202ENST00000342409 TEX29Q8N6K0 151 aa13.27□□□□□ -0.28
FRMD4A-202ENST00000342409 SDF2L1Q9HCN8 221 aa13.27□□□□□ -0.28
FRMD4A-202ENST00000342409 A0A1W2PRE2 83 aa13.27□□□□□ -0.29
FRMD4A-202ENST00000342409 ZNF727A8MUV8 499 aa13.27□□□□□ -0.29
FRMD4A-202ENST00000342409 F6UZH7 168 aa13.27□□□□□ -0.29
FRMD4A-202ENST00000342409 MRPS12O15235 138 aaKnown RBP13.27□□□□□ -0.29
FRMD4A-202ENST00000342409 NUPL2O15504 423 aaKnown RBP13.27□□□□□ -0.29
FRMD4A-202ENST00000342409 ZNF674Q2M3X9 581 aa13.27□□□□□ -0.29
FRMD4A-202ENST00000342409 TMEM88Q6PEY1 159 aa13.27□□□□□ -0.29
FRMD4A-202ENST00000342409 ZNF600Q6ZNG1 722 aa13.27□□□□□ -0.29
FRMD4A-202ENST00000342409 CBLN2Q8IUK8 224 aa13.27□□□□□ -0.29
FRMD4A-202ENST00000342409 C11orf52Q96A22 123 aa13.27□□□□□ -0.29
FRMD4A-202ENST00000342409 TVP23CQ96ET8 276 aa13.27□□□□□ -0.29
FRMD4A-202ENST00000342409 SMIM7Q9BQ49 75 aa13.27□□□□□ -0.29
FRMD4A-202ENST00000342409 PPP5D1E7EU14 171 aa13.26□□□□□ -0.29
FRMD4A-202ENST00000342409 M0R036 132 aa13.26□□□□□ -0.29
FRMD4A-202ENST00000342409 NDUFB4O95168 129 aa13.26□□□□□ -0.29
FRMD4A-202ENST00000342409 TRBV12-3P01733 135 aa13.26□□□□□ -0.29
FRMD4A-202ENST00000342409 PF4V1P10720 104 aa13.26□□□□□ -0.29
FRMD4A-202ENST00000342409 SRP14P37108 136 aaKnown RBP13.26□□□□□ -0.29
FRMD4A-202ENST00000342409 TOMM20LQ6UXN7 152 aa13.26□□□□□ -0.29
FRMD4A-202ENST00000342409 ZNF329Q86UD4 541 aa13.26□□□□□ -0.29
FRMD4A-202ENST00000342409 STXBP6Q8NFX7 210 aa13.26□□□□□ -0.29
FRMD4A-202ENST00000342409 ATP6V0BQ99437 205 aa13.26□□□□□ -0.29
FRMD4A-202ENST00000342409 SMR3AQ99954 134 aa13.26□□□□□ -0.29
FRMD4A-202ENST00000342409 NIPSNAP3BQ9BS92 247 aa13.26□□□□□ -0.29
FRMD4A-202ENST00000342409 TMEM14CQ9P0S9 112 aa13.26□□□□□ -0.29
FRMD4A-202ENST00000342409 IGHG4P01861 327 aa13.25□□□□□ -0.29
FRMD4A-202ENST00000342409 MYCNOSP40205 109 aa13.25□□□□□ -0.29
FRMD4A-202ENST00000342409 ELOVL1Q9BW60 279 aa13.25□□□□□ -0.29
FRMD4A-202ENST00000342409 PRSS22Q9GZN4 317 aa13.25□□□□□ -0.29
FRMD4A-202ENST00000342409 IGHV3OR16-8A0A075B7F1 116 aa13.25□□□□□ -0.29
FRMD4A-202ENST00000342409 ZNF98A6NK75 572 aa13.25□□□□□ -0.29
FRMD4A-202ENST00000342409 PSMB8P28062 276 aa13.25□□□□□ -0.29
FRMD4A-202ENST00000342409 RAB9AP51151 201 aa13.25□□□□□ -0.29
FRMD4A-202ENST00000342409 GAR1Q9NY12 217 aaKnown RBP13.25□□□□□ -0.29
FRMD4A-202ENST00000342409 TRBV20OR9-2A0A075B6H5 130 aa13.24□□□□□ -0.29
FRMD4A-202ENST00000342409 CLPSL1A2RUU4 121 aa13.24□□□□□ -0.29
FRMD4A-202ENST00000342409 H3BTX0 84 aa13.24□□□□□ -0.29
FRMD4A-202ENST00000342409 NBEAP1P0C6P0 100 aa13.24□□□□□ -0.29
FRMD4A-202ENST00000342409 SUMO1P63165 101 aaKnown RBP13.24□□□□□ -0.29
FRMD4A-202ENST00000342409 Q8N2B8 174 aa13.24□□□□□ -0.29
FRMD4A-202ENST00000342409 TMEM86BQ8N661 226 aa13.24□□□□□ -0.29
FRMD4A-202ENST00000342409 USMG5Q96IX5 58 aa13.24□□□□□ -0.29
FRMD4A-202ENST00000342409 NPFFR1Q9GZQ6 430 aa13.24□□□□□ -0.29
FRMD4A-202ENST00000342409 ESM1Q9NQ30 184 aa13.24□□□□□ -0.29
FRMD4A-202ENST00000342409 RPS10P5Q9NQ39 176 aa13.24□□□□□ -0.29
FRMD4A-202ENST00000342409 ZNF586Q9NXT0 402 aa13.24□□□□□ -0.29
FRMD4A-202ENST00000342409 SCGB2A1O75556 95 aa13.23□□□□□ -0.29
FRMD4A-202ENST00000342409 IGHV3-11P01762 117 aa13.23□□□□□ -0.29
FRMD4A-202ENST00000342409 RHEBQ15382 184 aa13.23□□□□□ -0.29
FRMD4A-202ENST00000342409 BLNKQ8WV28 456 aa13.23□□□□□ -0.29
FRMD4A-202ENST00000342409 GNB4Q9HAV0 340 aa13.23□□□□□ -0.29
FRMD4A-202ENST00000342409 NAT8Q9UHE5 227 aa13.23□□□□□ -0.29
FRMD4A-202ENST00000342409 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.22□□□□□ -0.29
FRMD4A-202ENST00000342409 DNAJC9-AS1A6NH13 148 aa13.22□□□□□ -0.29
FRMD4A-202ENST00000342409 IGLC2P0DOY2 106 aa13.22□□□□□ -0.29
FRMD4A-202ENST00000342409 CRYBB3P26998 211 aa13.22□□□□□ -0.29
FRMD4A-202ENST00000342409 RPL23P62829 140 aaKnown RBP13.22□□□□□ -0.29
FRMD4A-202ENST00000342409 TMEM241Q24JQ0 296 aa13.22□□□□□ -0.29
FRMD4A-202ENST00000342409 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.22□□□□□ -0.29
FRMD4A-202ENST00000342409 C2CD4CQ8TF44 421 aa13.22□□□□□ -0.29
FRMD4A-202ENST00000342409 HIST1H1EP10412 219 aaKnown RBP13.22□□□□□ -0.29
FRMD4A-202ENST00000342409 C17orf77Q96MU5 243 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms