RNA–Protein interactions for RNA: ENST00000340209.8

RBFOX1-202, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-202ENST00000340209 TEX15Q9BXT5 2789 aa8.06□□□□□ -1.12
RBFOX1-202ENST00000340209 HIST1H1BP16401 226 aaKnown RBP8.05□□□□□ -1.12
RBFOX1-202ENST00000340209 SP5Q6BEB4 398 aaPredicted RBP8.05□□□□□ -1.12
RBFOX1-202ENST00000340209 TUBA4BQ9H853 241 aa8.05□□□□□ -1.12
RBFOX1-202ENST00000340209 NPFFO15130 113 aa8.05□□□□□ -1.12
RBFOX1-202ENST00000340209 ATP6V0E1O15342 81 aa8.05□□□□□ -1.12
RBFOX1-202ENST00000340209 COX6B1P14854 86 aa8.05□□□□□ -1.12
RBFOX1-202ENST00000340209 TEX38Q6PEX7 206 aa8.05□□□□□ -1.12
RBFOX1-202ENST00000340209 OR11H6Q8NGC7 330 aa8.05□□□□□ -1.12
RBFOX1-202ENST00000340209 CFHR4Q92496 578 aa8.05□□□□□ -1.12
RBFOX1-202ENST00000340209 FLNAP21333 2647 aaKnown RBP8.05□□□□□ -1.12
RBFOX1-202ENST00000340209 ZNF98A6NK75 572 aa8.05□□□□□ -1.12
RBFOX1-202ENST00000340209 M0R3E3 92 aa8.05□□□□□ -1.12
RBFOX1-202ENST00000340209 C8orf31Q8N9H6 132 aa8.05□□□□□ -1.12
RBFOX1-202ENST00000340209 CTDSP1Q9GZU7 261 aa8.05□□□□□ -1.12
RBFOX1-202ENST00000340209 HIF1ANQ9NWT6 349 aa8.05□□□□□ -1.12
RBFOX1-202ENST00000340209 MUC21A0A0G2JKD1 596 aa8.04□□□□□ -1.12
RBFOX1-202ENST00000340209 MUC21A0A140T8X8 626 aa8.04□□□□□ -1.12
RBFOX1-202ENST00000340209 MUC21Q5SSG8 566 aa8.04□□□□□ -1.12
RBFOX1-202ENST00000340209 CLEC19AQ6UXS0 136 aa8.04□□□□□ -1.12
RBFOX1-202ENST00000340209 ZNF600Q6ZNG1 722 aa8.04□□□□□ -1.12
RBFOX1-202ENST00000340209 LY6LH3BQJ8 138 aa8.04□□□□□ -1.12
RBFOX1-202ENST00000340209 IBA57Q5T440 356 aaKnown RBP8.04□□□□□ -1.12
RBFOX1-202ENST00000340209 LINC00518Q8N0U6 118 aa8.04□□□□□ -1.12
RBFOX1-202ENST00000340209 C8orf46Q8TAG6 207 aa8.04□□□□□ -1.12
RBFOX1-202ENST00000340209 FAM167A-AS1Q96KT0 104 aa8.04□□□□□ -1.12
RBFOX1-202ENST00000340209 NOL4LQ96MY1 436 aaPredicted RBP8.04□□□□□ -1.12
RBFOX1-202ENST00000340209 C21orf62Q9NYP8 219 aa8.04□□□□□ -1.12
RBFOX1-202ENST00000340209 J3KRW8 73 aa8.04□□□□□ -1.12
RBFOX1-202ENST00000340209 PEX7O00628 323 aa8.04□□□□□ -1.12
RBFOX1-202ENST00000340209 IGLC1P0CG04 106 aa8.04□□□□□ -1.12
RBFOX1-202ENST00000340209 RPL11P62913 178 aaKnown RBP8.04□□□□□ -1.12
RBFOX1-202ENST00000340209 ANAPC16Q96DE5 110 aa8.04□□□□□ -1.12
RBFOX1-202ENST00000340209 SNURFLB1AK76 121 aa8.03□□□□□ -1.12
RBFOX1-202ENST00000340209 H3BUX3 64 aa8.03□□□□□ -1.12
RBFOX1-202ENST00000340209 TGFAP01135 160 aa8.03□□□□□ -1.12
RBFOX1-202ENST00000340209 MEOX2P50222 304 aa8.03□□□□□ -1.12
RBFOX1-202ENST00000340209 C15orf32Q32M92 178 aa8.03□□□□□ -1.12
RBFOX1-202ENST00000340209 Q71RC1 249 aaPredicted RBP8.03□□□□□ -1.12
RBFOX1-202ENST00000340209 ARL6IP6Q8N6S5 226 aa8.03□□□□□ -1.12
RBFOX1-202ENST00000340209 OR1L6Q8NGR2 347 aa8.03□□□□□ -1.12
RBFOX1-202ENST00000340209 SLC25A39Q9BZJ4 359 aaPredicted RBP8.03□□□□□ -1.12
RBFOX1-202ENST00000340209 SIRPDQ9H106 197 aa8.03□□□□□ -1.12
RBFOX1-202ENST00000340209 Q9H3A6 140 aa8.03□□□□□ -1.12
RBFOX1-202ENST00000340209 CENPVL3A0A0U1RRI6 287 aa8.03□□□□□ -1.12
RBFOX1-202ENST00000340209 K7EIM0 57 aa8.03□□□□□ -1.12
RBFOX1-202ENST00000340209 CORTO00230 105 aa8.03□□□□□ -1.12
RBFOX1-202ENST00000340209 RHOGP84095 191 aa8.03□□□□□ -1.12
RBFOX1-202ENST00000340209 RNF125Q96EQ8 232 aa8.03□□□□□ -1.12
RBFOX1-202ENST00000340209 MRPL32Q9BYC8 188 aaKnown RBP8.03□□□□□ -1.12
RBFOX1-202ENST00000340209 NAT8BQ9UHF3 227 aa8.03□□□□□ -1.12
RBFOX1-202ENST00000340209 CXorf65A6NEN9 183 aa8.03□□□□□ -1.12
RBFOX1-202ENST00000340209 C5orf52A6NGY3 159 aa8.03□□□□□ -1.12
RBFOX1-202ENST00000340209 IGKV1-17P01599 117 aa8.03□□□□□ -1.12
RBFOX1-202ENST00000340209 RPEL1Q2QD12 228 aa8.03□□□□□ -1.12
RBFOX1-202ENST00000340209 OR4F17Q8NGA8 305 aa8.03□□□□□ -1.12
RBFOX1-202ENST00000340209 C1RLQ9NZP8 487 aa8.03□□□□□ -1.12
RBFOX1-202ENST00000340209 CRYGBP07316 175 aa8.03□□□□□ -1.12
RBFOX1-202ENST00000340209 PFN1P07737 140 aaKnown RBP8.03□□□□□ -1.12
RBFOX1-202ENST00000340209 GZMBP10144 247 aa8.03□□□□□ -1.12
RBFOX1-202ENST00000340209 MFAP4P55083 255 aa8.03□□□□□ -1.12
RBFOX1-202ENST00000340209 TMEM95Q3KNT9 176 aa8.03□□□□□ -1.12
RBFOX1-202ENST00000340209 DAZAP1Q96EP5 407 aaKnown RBP8.03□□□□□ -1.12
RBFOX1-202ENST00000340209 ELOA3CA0A087WX78 387 aaPredicted RBP8.02□□□□□ -1.13
RBFOX1-202ENST00000340209 ODF3BA8MYP8 253 aa8.02□□□□□ -1.13
RBFOX1-202ENST00000340209 ZNF329Q86UD4 541 aa8.02□□□□□ -1.13
RBFOX1-202ENST00000340209 FXYD5Q96DB9 178 aa8.02□□□□□ -1.13
RBFOX1-202ENST00000340209 GAR1Q9NY12 217 aaKnown RBP8.02□□□□□ -1.13
RBFOX1-202ENST00000340209 CLEC3BP05452 202 aa8.02□□□□□ -1.13
RBFOX1-202ENST00000340209 MAS1LP35410 378 aa8.02□□□□□ -1.13
RBFOX1-202ENST00000340209 UBE2E1P51965 193 aa8.02□□□□□ -1.13
RBFOX1-202ENST00000340209 CHRDL1Q9BU40 450 aa8.02□□□□□ -1.13
RBFOX1-202ENST00000340209 IGHV7-81A0A0B4J1V7 117 aa8.02□□□□□ -1.13
RBFOX1-202ENST00000340209 RNF223E7ERA6 249 aa8.02□□□□□ -1.13
RBFOX1-202ENST00000340209 I3L2K1 104 aa8.02□□□□□ -1.13
RBFOX1-202ENST00000340209 CD33P20138 364 aa8.02□□□□□ -1.13
RBFOX1-202ENST00000340209 PMS2P11Q13670 270 aa8.02□□□□□ -1.13
RBFOX1-202ENST00000340209 USF2Q15853 346 aaPredicted RBP8.02□□□□□ -1.13
RBFOX1-202ENST00000340209 CDPF1Q6NVV7 123 aa8.02□□□□□ -1.13
RBFOX1-202ENST00000340209 SMAD7O15105 426 aaKnown RBP8.01□□□□□ -1.13
RBFOX1-202ENST00000340209 GATCO43716 136 aaKnown RBP8.01□□□□□ -1.13
RBFOX1-202ENST00000340209 PF4V1P10720 104 aa8.01□□□□□ -1.13
RBFOX1-202ENST00000340209 FOLR2P14207 255 aa8.01□□□□□ -1.13
RBFOX1-202ENST00000340209 ATP5IP56385 69 aaPredicted RBP8.01□□□□□ -1.13
RBFOX1-202ENST00000340209 KRTAP10-9P60411 292 aa8.01□□□□□ -1.13
RBFOX1-202ENST00000340209 TRGV9Q99603 122 aa8.01□□□□□ -1.13
RBFOX1-202ENST00000340209 THYN1Q9P016 225 aa8.01□□□□□ -1.13
RBFOX1-202ENST00000340209 ZNF562Q6V9R5 426 aa8.01□□□□□ -1.13
RBFOX1-202ENST00000340209 TCF24Q7RTU0 167 aa8.01□□□□□ -1.13
RBFOX1-202ENST00000340209 BAGE3Q86Y29 109 aa8.01□□□□□ -1.13
RBFOX1-202ENST00000340209 CIARTQ8N365 385 aaPredicted RBP8.01□□□□□ -1.13
RBFOX1-202ENST00000340209 TMEM116Q8NCL8 245 aa8.01□□□□□ -1.13
RBFOX1-202ENST00000340209 RNF2Q99496 336 aa8.01□□□□□ -1.13
RBFOX1-202ENST00000340209 SSBP4Q9BWG4 385 aaPredicted RBP8.01□□□□□ -1.13
RBFOX1-202ENST00000340209 ITPR3Q14573 2671 aa8.01□□□□□ -1.13
RBFOX1-202ENST00000340209 FBN2P35556 2912 aa8.01□□□□□ -1.13
RBFOX1-202ENST00000340209 ZNF785A8K8V0 405 aa8.01□□□□□ -1.13
RBFOX1-202ENST00000340209 HIST2H2BDQ6DRA6 164 aa8.01□□□□□ -1.13
RBFOX1-202ENST00000340209 Q8N9W7 124 aa8.01□□□□□ -1.13
RBFOX1-202ENST00000340209 JMJD1CQ15652 2540 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms