RNA–Protein interactions for RNA: ENST00000333617.8

LSAMP-201, Transcript of limbic system associated membrane protein, humanhuman

TSL 2

Gene LSAMP, Length 1,561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-201ENST00000333617 TIGITQ495A1 244 aa6.86□□□□□ -1.31
LSAMP-201ENST00000333617 FAM120AOSQ5T036 256 aa6.86□□□□□ -1.31
LSAMP-201ENST00000333617 ASPHD1Q5U4P2 390 aa6.86□□□□□ -1.31
LSAMP-201ENST00000333617 TTC9CQ8N5M4 171 aa6.86□□□□□ -1.31
LSAMP-201ENST00000333617 Q8N9W7 124 aa6.86□□□□□ -1.31
LSAMP-201ENST00000333617 FXYD5Q96DB9 178 aa6.86□□□□□ -1.31
LSAMP-201ENST00000333617 IMMP2LQ96T52 175 aa6.86□□□□□ -1.31
LSAMP-201ENST00000333617 PYGO2Q9BRQ0 406 aa6.86□□□□□ -1.31
LSAMP-201ENST00000333617 ELOVL1Q9BW60 279 aa6.86□□□□□ -1.31
LSAMP-201ENST00000333617 HIGD1AQ9Y241 93 aa6.86□□□□□ -1.31
LSAMP-201ENST00000333617 IGLV11-55A0A075B6I3 123 aa6.86□□□□□ -1.31
LSAMP-201ENST00000333617 IGHV7-81A0A0B4J1V7 117 aa6.86□□□□□ -1.31
LSAMP-201ENST00000333617 AP4M1O00189 453 aa6.86□□□□□ -1.31
LSAMP-201ENST00000333617 UBE2CO00762 179 aa6.86□□□□□ -1.31
LSAMP-201ENST00000333617 HLA-DRB1P01911 266 aa6.86□□□□□ -1.31
LSAMP-201ENST00000333617 TRGC2P03986 189 aa6.86□□□□□ -1.31
LSAMP-201ENST00000333617 RD3LP0DJH9 198 aa6.86□□□□□ -1.31
LSAMP-201ENST00000333617 CENPWQ5EE01 88 aa6.86□□□□□ -1.31
LSAMP-201ENST00000333617 KLF17Q5JT82 389 aaPredicted RBP6.86□□□□□ -1.31
LSAMP-201ENST00000333617 ZNF843Q8N446 348 aa6.86□□□□□ -1.31
LSAMP-201ENST00000333617 OR10G8Q8NGN5 311 aa6.86□□□□□ -1.31
LSAMP-201ENST00000333617 THYN1Q9P016 225 aa6.86□□□□□ -1.31
LSAMP-201ENST00000333617 PTPN13Q12923 2485 aa6.86□□□□□ -1.31
LSAMP-201ENST00000333617 CR1P17927 2039 aa6.86□□□□□ -1.31
LSAMP-201ENST00000333617 IGHV4-30-2A0A087WSY4 118 aa6.85□□□□□ -1.31
LSAMP-201ENST00000333617 TRAV30A0A087WSZ9 112 aa6.85□□□□□ -1.31
LSAMP-201ENST00000333617 A0A1W2PPQ1 181 aa6.85□□□□□ -1.31
LSAMP-201ENST00000333617 PPP5D1E7EU14 171 aa6.85□□□□□ -1.31
LSAMP-201ENST00000333617 K7EN84 100 aa6.85□□□□□ -1.31
LSAMP-201ENST00000333617 GNG7O60262 68 aa6.85□□□□□ -1.31
LSAMP-201ENST00000333617 GGCTO75223 188 aaKnown RBP6.85□□□□□ -1.31
LSAMP-201ENST00000333617 IGKV1-17P01599 117 aa6.85□□□□□ -1.31
LSAMP-201ENST00000333617 MFAP4P55083 255 aa6.85□□□□□ -1.31
LSAMP-201ENST00000333617 FABP9Q0Z7S8 132 aa6.85□□□□□ -1.31
LSAMP-201ENST00000333617 TEX38Q6PEX7 206 aa6.85□□□□□ -1.31
LSAMP-201ENST00000333617 ZNF329Q86UD4 541 aa6.85□□□□□ -1.31
LSAMP-201ENST00000333617 BTF3L4Q96K17 158 aa6.85□□□□□ -1.31
LSAMP-201ENST00000333617 TCEAL7Q9BRU2 100 aa6.85□□□□□ -1.31
LSAMP-201ENST00000333617 SRD5A3Q9H8P0 318 aa6.85□□□□□ -1.31
LSAMP-201ENST00000333617 IGHV1-69DA0A0B4J2H0 117 aa6.84□□□□□ -1.31
LSAMP-201ENST00000333617 KRTAP9-7A8MTY7 169 aa6.84□□□□□ -1.31
LSAMP-201ENST00000333617 PEX7O00628 323 aa6.84□□□□□ -1.31
LSAMP-201ENST00000333617 HIST1H2BKO60814 126 aa6.84□□□□□ -1.31
LSAMP-201ENST00000333617 TOMM40O96008 361 aa6.84□□□□□ -1.31
LSAMP-201ENST00000333617 IGHV1-69P01742 117 aa6.84□□□□□ -1.31
LSAMP-201ENST00000333617 HIST1H2BJP06899 126 aa6.84□□□□□ -1.31
LSAMP-201ENST00000333617 NBEAP1P0C6P0 100 aa6.84□□□□□ -1.31
LSAMP-201ENST00000333617 EGR2P11161 476 aaPredicted RBP6.84□□□□□ -1.31
LSAMP-201ENST00000333617 GP9P14770 177 aa6.84□□□□□ -1.31
LSAMP-201ENST00000333617 HIST1H2BOP23527 126 aa6.84□□□□□ -1.31
LSAMP-201ENST00000333617 HIST1H2BBP33778 126 aa6.84□□□□□ -1.31
LSAMP-201ENST00000333617 CNN1P51911 297 aaKnown RBP6.84□□□□□ -1.31
LSAMP-201ENST00000333617 HIST1H2BDP58876 126 aa6.84□□□□□ -1.31
LSAMP-201ENST00000333617 LINC00310P59036 64 aa6.84□□□□□ -1.31
LSAMP-201ENST00000333617 HIST1H2BCP62807 126 aa6.84□□□□□ -1.31
LSAMP-201ENST00000333617 FOXL1Q12952 345 aa6.84□□□□□ -1.31
LSAMP-201ENST00000333617 HIST2H2BEQ16778 126 aa6.84□□□□□ -1.31
LSAMP-201ENST00000333617 CLEC12BQ2HXU8 276 aa6.84□□□□□ -1.31
LSAMP-201ENST00000333617 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.84□□□□□ -1.31
LSAMP-201ENST00000333617 LEMD1Q68G75 181 aa6.84□□□□□ -1.31
LSAMP-201ENST00000333617 SGMS2Q8NHU3 365 aa6.84□□□□□ -1.31
LSAMP-201ENST00000333617 BLNKQ8WV28 456 aa6.84□□□□□ -1.31
LSAMP-201ENST00000333617 HIST1H2BHQ93079 126 aa6.84□□□□□ -1.31
LSAMP-201ENST00000333617 ZNF48Q96MX3 618 aaPredicted RBP6.84□□□□□ -1.31
LSAMP-201ENST00000333617 HIST1H2BNQ99877 126 aa6.84□□□□□ -1.31
LSAMP-201ENST00000333617 HIST1H2BMQ99879 126 aa6.84□□□□□ -1.31
LSAMP-201ENST00000333617 SLC25A39Q9BZJ4 359 aaPredicted RBP6.84□□□□□ -1.31
LSAMP-201ENST00000333617 TYMSP04818 313 aa6.83□□□□□ -1.32
LSAMP-201ENST00000333617 SNRPCP09234 159 aaKnown RBP6.83□□□□□ -1.32
LSAMP-201ENST00000333617 COX6B1P14854 86 aa6.83□□□□□ -1.32
LSAMP-201ENST00000333617 NDUFA6P56556 154 aa6.83□□□□□ -1.32
LSAMP-201ENST00000333617 FAM3BP58499 235 aaPredicted RBP6.83□□□□□ -1.32
LSAMP-201ENST00000333617 DSCR9P59020 149 aa6.83□□□□□ -1.32
LSAMP-201ENST00000333617 TAS2R60P59551 318 aa6.83□□□□□ -1.32
LSAMP-201ENST00000333617 ERVFC1-1P60608 527 aa6.83□□□□□ -1.32
LSAMP-201ENST00000333617 YPEL3P61236 119 aaPredicted RBP6.83□□□□□ -1.32
LSAMP-201ENST00000333617 RANP62826 216 aaKnown RBP6.83□□□□□ -1.32
LSAMP-201ENST00000333617 Q56UQ5 140 aa6.83□□□□□ -1.32
LSAMP-201ENST00000333617 LINC00518Q8N0U6 118 aa6.83□□□□□ -1.32
LSAMP-201ENST00000333617 FRZBQ92765 325 aa6.83□□□□□ -1.32
LSAMP-201ENST00000333617 IGF2BP2-AS1Q96M15 143 aa6.83□□□□□ -1.32
LSAMP-201ENST00000333617 TMEM68Q96MH6 324 aa6.83□□□□□ -1.32
LSAMP-201ENST00000333617 HSPB9Q9BQS6 159 aa6.83□□□□□ -1.32
LSAMP-201ENST00000333617 C21orf62Q9NYP8 219 aa6.83□□□□□ -1.32
LSAMP-201ENST00000333617 MRPL27Q9P0M9 148 aaKnown RBP6.83□□□□□ -1.32
LSAMP-201ENST00000333617 TMEM14CQ9P0S9 112 aa6.83□□□□□ -1.32
LSAMP-201ENST00000333617 CDC42EP3Q9UKI2 254 aa6.83□□□□□ -1.32
LSAMP-201ENST00000333617 FBN2P35556 2912 aa6.83□□□□□ -1.32
LSAMP-201ENST00000333617 TEX15Q9BXT5 2789 aa6.83□□□□□ -1.32
LSAMP-201ENST00000333617 IGHV3OR16-10A0A075B7F0 116 aa6.82□□□□□ -1.32
LSAMP-201ENST00000333617 TRAV40A0A0B4J280 105 aa6.82□□□□□ -1.32
LSAMP-201ENST00000333617 A0A0U1RQK1 487 aa6.82□□□□□ -1.32
LSAMP-201ENST00000333617 WI2-2373I1.2A0A1W2PRP0 233 aa6.82□□□□□ -1.32
LSAMP-201ENST00000333617 ZNF320A2RRD8 509 aa6.82□□□□□ -1.32
LSAMP-201ENST00000333617 PGPA6NDG6 321 aa6.82□□□□□ -1.32
LSAMP-201ENST00000333617 PHOX2AO14813 284 aa6.82□□□□□ -1.32
LSAMP-201ENST00000333617 SCGB2A1O75556 95 aa6.82□□□□□ -1.32
LSAMP-201ENST00000333617 OR2J3O76001 311 aa6.82□□□□□ -1.32
LSAMP-201ENST00000333617 NDUFB8O95169 186 aa6.82□□□□□ -1.32
LSAMP-201ENST00000333617 GCGP01275 180 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms