RNA–Protein interactions for RNA: ENST00000332853.8

VSTM4-202, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSTM4, Length 6,392 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-202ENST00000332853 A0A1W2PPI3 338 aa10.56□□□□□ -0.72
VSTM4-202ENST00000332853 M0R1W7 72 aa10.56□□□□□ -0.72
VSTM4-202ENST00000332853 MAPK1IP1LQ8NDC0 245 aa10.56□□□□□ -0.72
VSTM4-202ENST00000332853 PRSS22Q9GZN4 317 aa10.56□□□□□ -0.72
VSTM4-202ENST00000332853 NPFFR1Q9GZQ6 430 aa10.56□□□□□ -0.72
VSTM4-202ENST00000332853 NRN1Q9NPD7 142 aa10.56□□□□□ -0.72
VSTM4-202ENST00000332853 DIAPH2-AS1Q14236 149 aa10.55□□□□□ -0.72
VSTM4-202ENST00000332853 SIGLEC15Q6ZMC9 328 aa10.55□□□□□ -0.72
VSTM4-202ENST00000332853 CBY1Q9Y3M2 126 aa10.55□□□□□ -0.72
VSTM4-202ENST00000332853 COL4A4P53420 1690 aaPredicted RBP10.55□□□□□ -0.72
VSTM4-202ENST00000332853 RNF138Q8WVD3 245 aa10.55□□□□□ -0.72
VSTM4-202ENST00000332853 TRGV9Q99603 122 aa10.55□□□□□ -0.72
VSTM4-202ENST00000332853 TCF15Q12870 199 aa10.55□□□□□ -0.72
VSTM4-202ENST00000332853 TMEM131Q92545 1883 aa10.55□□□□□ -0.72
VSTM4-202ENST00000332853 TRAV8-1A0A0A6YYK1 113 aa10.55□□□□□ -0.72
VSTM4-202ENST00000332853 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.55□□□□□ -0.72
VSTM4-202ENST00000332853 CD7P09564 240 aa10.55□□□□□ -0.72
VSTM4-202ENST00000332853 SAA4P35542 130 aa10.55□□□□□ -0.72
VSTM4-202ENST00000332853 LBHQ53QV2 105 aaPredicted RBP10.55□□□□□ -0.72
VSTM4-202ENST00000332853 ORMDL3Q8N138 153 aa10.55□□□□□ -0.72
VSTM4-202ENST00000332853 LINC00479Q96M42 142 aa10.55□□□□□ -0.72
VSTM4-202ENST00000332853 PCNX1Q96RV3 2341 aa10.55□□□□□ -0.72
VSTM4-202ENST00000332853 FAM181BA6NEQ2 426 aa10.54□□□□□ -0.72
VSTM4-202ENST00000332853 C15orf65H3BRN8 121 aa10.54□□□□□ -0.72
VSTM4-202ENST00000332853 MINOS1Q5TGZ0 78 aa10.54□□□□□ -0.72
VSTM4-202ENST00000332853 SLC50A1Q9BRV3 221 aa10.54□□□□□ -0.72
VSTM4-202ENST00000332853 MINOS1-NBL1R4GNA1 71 aa10.54□□□□□ -0.72
VSTM4-202ENST00000332853 DOCK10Q96BY6 2186 aa10.54□□□□□ -0.72
VSTM4-202ENST00000332853 GATA4P43694 442 aa10.54□□□□□ -0.72
VSTM4-202ENST00000332853 LDLRAD2Q5SZI1 272 aa10.54□□□□□ -0.72
VSTM4-202ENST00000332853 ZNF329Q86UD4 541 aa10.54□□□□□ -0.72
VSTM4-202ENST00000332853 FOXC2Q99958 501 aa10.54□□□□□ -0.72
VSTM4-202ENST00000332853 TRAV8-6A0A0B4J262 113 aa10.54□□□□□ -0.72
VSTM4-202ENST00000332853 LINC01587Q99440 93 aa10.54□□□□□ -0.72
VSTM4-202ENST00000332853 COL25A1Q9BXS0 654 aaPredicted RBP10.54□□□□□ -0.72
VSTM4-202ENST00000332853 SOX21Q9Y651 276 aaPredicted RBP10.54□□□□□ -0.72
VSTM4-202ENST00000332853 PCNX2A6NKB5 2137 aa10.54□□□□□ -0.72
VSTM4-202ENST00000332853 NBASA2RRP1 2371 aa10.54□□□□□ -0.72
VSTM4-202ENST00000332853 UBE2CO00762 179 aa10.54□□□□□ -0.72
VSTM4-202ENST00000332853 Q8TCH9 128 aa10.54□□□□□ -0.72
VSTM4-202ENST00000332853 C19orf54Q5BKX5 351 aa10.54□□□□□ -0.72
VSTM4-202ENST00000332853 Q8TAT8 98 aa10.54□□□□□ -0.72
VSTM4-202ENST00000332853 GRNP28799 593 aaKnown RBP10.53□□□□□ -0.72
VSTM4-202ENST00000332853 EMP1P54849 157 aa10.53□□□□□ -0.72
VSTM4-202ENST00000332853 LYRM7Q5U5X0 104 aa10.53□□□□□ -0.72
VSTM4-202ENST00000332853 TSKUQ8WUA8 353 aa10.53□□□□□ -0.72
VSTM4-202ENST00000332853 LEPP41159 167 aa10.53□□□□□ -0.72
VSTM4-202ENST00000332853 TMEM155Q4W5P6 130 aa10.53□□□□□ -0.72
VSTM4-202ENST00000332853 DEFB104AQ8WTQ1 72 aa10.53□□□□□ -0.72
VSTM4-202ENST00000332853 USF3Q68DE3 2245 aa10.53□□□□□ -0.72
VSTM4-202ENST00000332853 FAM90A2PQ658T7 463 aa10.53□□□□□ -0.72
VSTM4-202ENST00000332853 TPSG1Q9NRR2 321 aa10.53□□□□□ -0.72
VSTM4-202ENST00000332853 TMEM14BQ9NUH8 114 aa10.53□□□□□ -0.72
VSTM4-202ENST00000332853 LGALS3P17931 250 aaKnown RBP10.53□□□□□ -0.72
VSTM4-202ENST00000332853 TMEM242Q9NWH2 141 aa10.53□□□□□ -0.72
VSTM4-202ENST00000332853 PSMB11A5LHX3 300 aa10.53□□□□□ -0.72
VSTM4-202ENST00000332853 NBL1P41271 181 aa10.53□□□□□ -0.72
VSTM4-202ENST00000332853 GNB1LQ9BYB4 327 aa10.53□□□□□ -0.72
VSTM4-202ENST00000332853 ZNF256Q9Y2P7 627 aaPredicted RBP10.53□□□□□ -0.72
VSTM4-202ENST00000332853 LOC107984156A0A0G2JMH3 177 aa10.52□□□□□ -0.72
VSTM4-202ENST00000332853 Q6AWC8 147 aa10.52□□□□□ -0.72
VSTM4-202ENST00000332853 ARL17AQ8IVW1 177 aa10.52□□□□□ -0.72
VSTM4-202ENST00000332853 LOXP28300 417 aaPredicted RBP10.52□□□□□ -0.73
VSTM4-202ENST00000332853 C12orf54Q6X4T0 127 aa10.52□□□□□ -0.73
VSTM4-202ENST00000332853 LINC00587B1AMM8 73 aa10.52□□□□□ -0.73
VSTM4-202ENST00000332853 WISP2O76076 250 aa10.52□□□□□ -0.73
VSTM4-202ENST00000332853 TCRAP04437 139 aa10.52□□□□□ -0.73
VSTM4-202ENST00000332853 SCGB3A1Q96QR1 104 aa10.52□□□□□ -0.73
VSTM4-202ENST00000332853 HIST1H2BLQ99880 126 aa10.52□□□□□ -0.73
VSTM4-202ENST00000332853 NDUFA3O95167 84 aa10.52□□□□□ -0.73
VSTM4-202ENST00000332853 C3orf36Q3SXR2 165 aa10.52□□□□□ -0.73
VSTM4-202ENST00000332853 TMEM170BQ5T4T1 132 aa10.52□□□□□ -0.73
VSTM4-202ENST00000332853 ZNF833PQ6ZTB9 187 aa10.52□□□□□ -0.73
VSTM4-202ENST00000332853 RNF5Q99942 180 aa10.52□□□□□ -0.73
VSTM4-202ENST00000332853 TRBV24-1A0A075B6N3 115 aa10.51□□□□□ -0.73
VSTM4-202ENST00000332853 ZNF726P1Q15940 193 aa10.51□□□□□ -0.73
VSTM4-202ENST00000332853 C11orf53Q8IXP5 236 aa10.51□□□□□ -0.73
VSTM4-202ENST00000332853 IGFBPL1Q8WX77 278 aa10.51□□□□□ -0.73
VSTM4-202ENST00000332853 PSMG4Q5JS54 123 aa10.51□□□□□ -0.73
VSTM4-202ENST00000332853 NIT1Q86X76 327 aa10.51□□□□□ -0.73
VSTM4-202ENST00000332853 PRSS2P07478 247 aa10.51□□□□□ -0.73
VSTM4-202ENST00000332853 HIST3H2BBQ8N257 126 aa10.51□□□□□ -0.73
VSTM4-202ENST00000332853 PARD6GQ9BYG4 376 aaPredicted RBP10.51□□□□□ -0.73
VSTM4-202ENST00000332853 TNFRSF18Q9Y5U5 241 aa10.51□□□□□ -0.73
VSTM4-202ENST00000332853 DOCK11Q5JSL3 2073 aa10.51□□□□□ -0.73
VSTM4-202ENST00000332853 PEMTQ9UBM1 199 aa10.51□□□□□ -0.73
VSTM4-202ENST00000332853 B4DSR2 109 aa10.51□□□□□ -0.73
VSTM4-202ENST00000332853 PRTN3P24158 256 aa10.51□□□□□ -0.73
VSTM4-202ENST00000332853 IGLV3-9A0A075B6K5 115 aa10.5□□□□□ -0.73
VSTM4-202ENST00000332853 GAGE10A6NGK3 116 aa10.5□□□□□ -0.73
VSTM4-202ENST00000332853 LINC00614P0C842 121 aa10.5□□□□□ -0.73
VSTM4-202ENST00000332853 NSUN5P1Q3KNT7 163 aa10.5□□□□□ -0.73
VSTM4-202ENST00000332853 CACNA1HO95180 2353 aa10.5□□□□□ -0.73
VSTM4-202ENST00000332853 NDUFA4L2Q9NRX3 87 aa10.5□□□□□ -0.73
VSTM4-202ENST00000332853 A0A1B0GW15 77 aa10.5□□□□□ -0.73
VSTM4-202ENST00000332853 PAX1P15863 534 aa10.5□□□□□ -0.73
VSTM4-202ENST00000332853 FXYD7P58549 80 aa10.5□□□□□ -0.73
VSTM4-202ENST00000332853 CADP27708 2225 aa10.5□□□□□ -0.73
VSTM4-202ENST00000332853 ZGRF1Q86YA3 2104 aa10.5□□□□□ -0.73
VSTM4-202ENST00000332853 ITGB1BP1O14713 200 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 172 ms