RNA–Protein interactions for RNA: ENST00000332682.8

TRIM49B-201, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 1,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-201ENST00000332682 RNF2Q99496 336 aa9.29□□□□□ -0.92
TRIM49B-201ENST00000332682 HIGD1AQ9Y241 93 aa9.29□□□□□ -0.92
TRIM49B-201ENST00000332682 IGHV3OR16-8A0A075B7F1 116 aa9.28□□□□□ -0.92
TRIM49B-201ENST00000332682 LINC00862A6NCI5 91 aa9.28□□□□□ -0.92
TRIM49B-201ENST00000332682 NDUFA4O00483 81 aa9.28□□□□□ -0.92
TRIM49B-201ENST00000332682 STAG3L2P0CL84 134 aa9.28□□□□□ -0.92
TRIM49B-201ENST00000332682 STAG3L3P0CL85 134 aa9.28□□□□□ -0.92
TRIM49B-201ENST00000332682 HIST2H2BDQ6DRA6 164 aa9.28□□□□□ -0.92
TRIM49B-201ENST00000332682 C11orf44Q8N8P7 122 aa9.28□□□□□ -0.92
TRIM49B-201ENST00000332682 C4orf3Q8WVX3 66 aa9.28□□□□□ -0.92
TRIM49B-201ENST00000332682 IGHV4OR15-8A0A075B7B6 117 aa9.27□□□□□ -0.93
TRIM49B-201ENST00000332682 A0A087WW49 117 aa9.27□□□□□ -0.93
TRIM49B-201ENST00000332682 HBE1P02100 147 aa9.27□□□□□ -0.93
TRIM49B-201ENST00000332682 CCL20P78556 96 aa9.27□□□□□ -0.93
TRIM49B-201ENST00000332682 UNQ9165/PRO28630Q6UXU0 137 aa9.27□□□□□ -0.93
TRIM49B-201ENST00000332682 KLHL30-AS1Q8NEE0 82 aa9.27□□□□□ -0.93
TRIM49B-201ENST00000332682 WFDC12Q8WWY7 111 aa9.27□□□□□ -0.93
TRIM49B-201ENST00000332682 FAM167A-AS1Q96KT0 104 aa9.27□□□□□ -0.93
TRIM49B-201ENST00000332682 CITED2Q99967 270 aaPredicted RBP9.27□□□□□ -0.93
TRIM49B-201ENST00000332682 SLC25A2Q9BXI2 301 aa9.27□□□□□ -0.93
TRIM49B-201ENST00000332682 SLC25A39Q9BZJ4 359 aaPredicted RBP9.27□□□□□ -0.93
TRIM49B-201ENST00000332682 MED9Q9NWA0 146 aa9.27□□□□□ -0.93
TRIM49B-201ENST00000332682 TRAV5A0A0B4J249 113 aa9.26□□□□□ -0.93
TRIM49B-201ENST00000332682 A0A1B0GUS0 222 aa9.26□□□□□ -0.93
TRIM49B-201ENST00000332682 H3BRN7 92 aa9.26□□□□□ -0.93
TRIM49B-201ENST00000332682 ARL14EPLP0DKL9 152 aa9.26□□□□□ -0.93
TRIM49B-201ENST00000332682 C8orf88P0DMB2 117 aa9.26□□□□□ -0.93
TRIM49B-201ENST00000332682 TAS2R45P59539 299 aa9.26□□□□□ -0.93
TRIM49B-201ENST00000332682 DEFB136Q30KP8 78 aa9.26□□□□□ -0.93
TRIM49B-201ENST00000332682 KHDC3LQ587J8 217 aa9.26□□□□□ -0.93
TRIM49B-201ENST00000332682 TMEM190Q8WZ59 177 aa9.26□□□□□ -0.93
TRIM49B-201ENST00000332682 ZNF503Q96F45 646 aa9.26□□□□□ -0.93
TRIM49B-201ENST00000332682 SHANK2-AS3Q9BTD1 123 aa9.26□□□□□ -0.93
TRIM49B-201ENST00000332682 SCRT1Q9BWW7 348 aa9.26□□□□□ -0.93
TRIM49B-201ENST00000332682 TECRQ9NZ01 308 aaKnown RBP9.26□□□□□ -0.93
TRIM49B-201ENST00000332682 CXorf1O96002 111 aa9.26□□□□□ -0.93
TRIM49B-201ENST00000332682 HSPB1P04792 205 aaKnown RBP9.26□□□□□ -0.93
TRIM49B-201ENST00000332682 NDUFA5Q16718 116 aa9.26□□□□□ -0.93
TRIM49B-201ENST00000332682 RPEL1Q2QD12 228 aa9.26□□□□□ -0.93
TRIM49B-201ENST00000332682 LEMD1Q68G75 181 aa9.26□□□□□ -0.93
TRIM49B-201ENST00000332682 IL34Q6ZMJ4 242 aa9.26□□□□□ -0.93
TRIM49B-201ENST00000332682 COMMD7Q86VX2 200 aa9.26□□□□□ -0.93
TRIM49B-201ENST00000332682 GPHB5Q86YW7 130 aa9.26□□□□□ -0.93
TRIM49B-201ENST00000332682 C20orf24Q9BUV8 137 aa9.26□□□□□ -0.93
TRIM49B-201ENST00000332682 PFDN2Q9UHV9 154 aa9.26□□□□□ -0.93
TRIM49B-201ENST00000332682 RABAC1Q9UI14 185 aa9.26□□□□□ -0.93
TRIM49B-201ENST00000332682 TSSC4Q9Y5U2 329 aaPredicted RBP9.26□□□□□ -0.93
TRIM49B-201ENST00000332682 NUDT19A8MXV4 375 aa9.25□□□□□ -0.93
TRIM49B-201ENST00000332682 GCHFRP30047 84 aa9.25□□□□□ -0.93
TRIM49B-201ENST00000332682 HOXD3P31249 432 aaPredicted RBP9.25□□□□□ -0.93
TRIM49B-201ENST00000332682 KRTAP10-3P60369 221 aa9.25□□□□□ -0.93
TRIM49B-201ENST00000332682 FOXL1Q12952 345 aa9.25□□□□□ -0.93
TRIM49B-201ENST00000332682 PQLC2Q6ZP29 291 aa9.25□□□□□ -0.93
TRIM49B-201ENST00000332682 C8orf86Q6ZUL3 223 aa9.25□□□□□ -0.93
TRIM49B-201ENST00000332682 TMPRSS5Q9H3S3 457 aa9.25□□□□□ -0.93
TRIM49B-201ENST00000332682 ATRQ13535 2644 aa9.25□□□□□ -0.93
TRIM49B-201ENST00000332682 A0A1W2PRX2 142 aa9.24□□□□□ -0.93
TRIM49B-201ENST00000332682 ZNF98A6NK75 572 aa9.24□□□□□ -0.93
TRIM49B-201ENST00000332682 ZNF207O43670 478 aaKnown RBP9.24□□□□□ -0.93
TRIM49B-201ENST00000332682 OR7C2O60412 319 aa9.24□□□□□ -0.93
TRIM49B-201ENST00000332682 GP9P14770 177 aa9.24□□□□□ -0.93
TRIM49B-201ENST00000332682 ZP3P21754 424 aa9.24□□□□□ -0.93
TRIM49B-201ENST00000332682 CRYBB3P26998 211 aa9.24□□□□□ -0.93
TRIM49B-201ENST00000332682 S100A7AQ86SG5 101 aa9.24□□□□□ -0.93
TRIM49B-201ENST00000332682 PRIMA1Q86XR5 153 aa9.24□□□□□ -0.93
TRIM49B-201ENST00000332682 IQCF2Q8IXL9 164 aa9.24□□□□□ -0.93
TRIM49B-201ENST00000332682 SLC7A5P1Q8MH63 180 aa9.24□□□□□ -0.93
TRIM49B-201ENST00000332682 OR11H1Q8NG94 326 aa9.24□□□□□ -0.93
TRIM49B-201ENST00000332682 MARC2Q969Z3 335 aa9.24□□□□□ -0.93
TRIM49B-201ENST00000332682 METTL26Q96S19 204 aa9.24□□□□□ -0.93
TRIM49B-201ENST00000332682 ZNF320A2RRD8 509 aa9.23□□□□□ -0.93
TRIM49B-201ENST00000332682 ADARB2-AS1A8MUL3 147 aa9.23□□□□□ -0.93
TRIM49B-201ENST00000332682 LINC01619G3V211 115 aa9.23□□□□□ -0.93
TRIM49B-201ENST00000332682 OR10J4P0C629 311 aa9.23□□□□□ -0.93
TRIM49B-201ENST00000332682 PYYP10082 97 aa9.23□□□□□ -0.93
TRIM49B-201ENST00000332682 NPPCP23582 126 aa9.23□□□□□ -0.93
TRIM49B-201ENST00000332682 PSMB3P49720 205 aa9.23□□□□□ -0.93
TRIM49B-201ENST00000332682 UBE2L3P68036 154 aaKnown RBP9.23□□□□□ -0.93
TRIM49B-201ENST00000332682 KRTAP24-1Q3LI83 254 aa9.23□□□□□ -0.93
TRIM49B-201ENST00000332682 FAM106AQ4KMX7 169 aa9.23□□□□□ -0.93
TRIM49B-201ENST00000332682 REC114Q7Z4M0 266 aa9.23□□□□□ -0.93
TRIM49B-201ENST00000332682 STXBP6Q8NFX7 210 aa9.23□□□□□ -0.93
TRIM49B-201ENST00000332682 OR1N2Q8NGR9 330 aa9.23□□□□□ -0.93
TRIM49B-201ENST00000332682 FAM210AQ96ND0 272 aa9.23□□□□□ -0.93
TRIM49B-201ENST00000332682 DUX3Q96PT4 197 aa9.23□□□□□ -0.93
TRIM49B-201ENST00000332682 PAXXQ9BUH6 204 aa9.23□□□□□ -0.93
TRIM49B-201ENST00000332682 DAZ1Q9NQZ3 744 aaKnown RBP9.23□□□□□ -0.93
TRIM49B-201ENST00000332682 GNG13Q9P2W3 67 aa9.23□□□□□ -0.93
TRIM49B-201ENST00000332682 U3KQE9 123 aa9.23□□□□□ -0.93
TRIM49B-201ENST00000332682 RAB19A4D1S5 217 aa9.22□□□□□ -0.93
TRIM49B-201ENST00000332682 A8MWP6 167 aa9.22□□□□□ -0.93
TRIM49B-201ENST00000332682 BUB3O43684 328 aa9.22□□□□□ -0.93
TRIM49B-201ENST00000332682 APOHP02749 345 aaPredicted RBP9.22□□□□□ -0.93
TRIM49B-201ENST00000332682 S100A7P31151 101 aa9.22□□□□□ -0.93
TRIM49B-201ENST00000332682 SLURP1P55000 103 aa9.22□□□□□ -0.93
TRIM49B-201ENST00000332682 SYNJ2BPP57105 145 aa9.22□□□□□ -0.93
TRIM49B-201ENST00000332682 FHL3Q13643 280 aa9.22□□□□□ -0.93
TRIM49B-201ENST00000332682 PMS2P11Q13670 270 aa9.22□□□□□ -0.93
TRIM49B-201ENST00000332682 C1QL4Q86Z23 238 aa9.22□□□□□ -0.93
TRIM49B-201ENST00000332682 SUN5Q8TC36 379 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms