RNA–Protein interactions for RNA: ENST00000331148.5

CLSTN3-202, Transcript of calsyntenin 3, humanhuman

TSL 1 (best)

Gene CLSTN3, Length 2,288 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-202ENST00000331148 NEU4Q8WWR8 484 aaPredicted RBP14.55□□□□□ -0.08
CLSTN3-202ENST00000331148 PLSCR4Q9NRQ2 329 aa14.55□□□□□ -0.08
CLSTN3-202ENST00000331148 IGKV1D-37A0A075B6S9 117 aa14.54□□□□□ -0.08
CLSTN3-202ENST00000331148 A6NDN8 102 aa14.54□□□□□ -0.08
CLSTN3-202ENST00000331148 MBD3L4A6NDZ8 208 aaPredicted RBP14.54□□□□□ -0.08
CLSTN3-202ENST00000331148 MBD3L3A6NE82 208 aaPredicted RBP14.54□□□□□ -0.08
CLSTN3-202ENST00000331148 MBD3L5A6NJ08 208 aaPredicted RBP14.54□□□□□ -0.08
CLSTN3-202ENST00000331148 NCR2O95944 276 aa14.54□□□□□ -0.08
CLSTN3-202ENST00000331148 MZT1Q08AG7 82 aa14.54□□□□□ -0.08
CLSTN3-202ENST00000331148 LINC00305Q7Z4B0 112 aa14.54□□□□□ -0.08
CLSTN3-202ENST00000331148 C5orf17Q8NAS9 161 aa14.54□□□□□ -0.08
CLSTN3-202ENST00000331148 MBD3L2Q8NHZ7 208 aaPredicted RBP14.54□□□□□ -0.08
CLSTN3-202ENST00000331148 NPIPB3Q92617 1050 aa14.54□□□□□ -0.08
CLSTN3-202ENST00000331148 ZNF747Q9BV97 191 aa14.54□□□□□ -0.08
CLSTN3-202ENST00000331148 RAB9BQ9NP90 201 aa14.54□□□□□ -0.08
CLSTN3-202ENST00000331148 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.54□□□□□ -0.08
CLSTN3-202ENST00000331148 H3BUT2 72 aa14.54□□□□□ -0.08
CLSTN3-202ENST00000331148 CECR9P0C854 216 aa14.54□□□□□ -0.08
CLSTN3-202ENST00000331148 SEM1Q6ZVN7 128 aa14.54□□□□□ -0.08
CLSTN3-202ENST00000331148 DAZAP1Q96EP5 407 aaKnown RBP14.54□□□□□ -0.08
CLSTN3-202ENST00000331148 FMC1Q96HJ9 113 aa14.54□□□□□ -0.08
CLSTN3-202ENST00000331148 ZNF71Q9NQZ8 489 aaPredicted RBP14.54□□□□□ -0.08
CLSTN3-202ENST00000331148 NDUFA4L2Q9NRX3 87 aa14.54□□□□□ -0.08
CLSTN3-202ENST00000331148 SELENOKQ9Y6D0 94 aa14.54□□□□□ -0.08
CLSTN3-202ENST00000331148 ANKRD11Q6UB99 2663 aaPredicted RBP14.53□□□□□ -0.08
CLSTN3-202ENST00000331148 CEP295Q9C0D2 2601 aa14.53□□□□□ -0.08
CLSTN3-202ENST00000331148 HOXC12P31275 282 aa14.53□□□□□ -0.08
CLSTN3-202ENST00000331148 UCNP55089 124 aa14.53□□□□□ -0.08
CLSTN3-202ENST00000331148 MBNL2Q5VZF2 373 aaKnown RBP14.53□□□□□ -0.08
CLSTN3-202ENST00000331148 SVILO95425 2214 aa14.53□□□□□ -0.08
CLSTN3-202ENST00000331148 BOD1L1Q8NFC6 3051 aa14.53□□□□□ -0.08
CLSTN3-202ENST00000331148 TMEM8BA6NDV4 472 aa14.53□□□□□ -0.08
CLSTN3-202ENST00000331148 HAX1O00165 279 aa14.53□□□□□ -0.08
CLSTN3-202ENST00000331148 APOHP02749 345 aaPredicted RBP14.53□□□□□ -0.08
CLSTN3-202ENST00000331148 FAM87AP0C7U9 286 aa14.53□□□□□ -0.08
CLSTN3-202ENST00000331148 ERHP84090 104 aaKnown RBP14.53□□□□□ -0.08
CLSTN3-202ENST00000331148 NEGR1Q7Z3B1 354 aa14.53□□□□□ -0.08
CLSTN3-202ENST00000331148 LHFPL4Q7Z7J7 247 aa14.53□□□□□ -0.08
CLSTN3-202ENST00000331148 RABAC1Q9UI14 185 aa14.53□□□□□ -0.08
CLSTN3-202ENST00000331148 RAXQ9Y2V3 346 aa14.53□□□□□ -0.08
CLSTN3-202ENST00000331148 IGHV3-48P01763 117 aa14.52□□□□□ -0.08
CLSTN3-202ENST00000331148 NAA38Q9BRA0 125 aaKnown RBP14.52□□□□□ -0.08
CLSTN3-202ENST00000331148 AP5S1Q9NUS5 200 aa14.52□□□□□ -0.08
CLSTN3-202ENST00000331148 PROCRQ9UNN8 238 aa14.52□□□□□ -0.08
CLSTN3-202ENST00000331148 C1orf185Q5T7R7 199 aa14.52□□□□□ -0.09
CLSTN3-202ENST00000331148 STXBP6Q8NFX7 210 aa14.52□□□□□ -0.09
CLSTN3-202ENST00000331148 OR10AG1Q8NH19 301 aa14.52□□□□□ -0.09
CLSTN3-202ENST00000331148 A0A0G2JLM5 398 aa14.51□□□□□ -0.09
CLSTN3-202ENST00000331148 NPIPB6E9PJ23 425 aa14.51□□□□□ -0.09
CLSTN3-202ENST00000331148 CFHR2P36980 270 aa14.51□□□□□ -0.09
CLSTN3-202ENST00000331148 KIR3DS1Q14943 382 aa14.51□□□□□ -0.09
CLSTN3-202ENST00000331148 THAP8Q8NA92 274 aa14.51□□□□□ -0.09
CLSTN3-202ENST00000331148 Q8NA96 180 aa14.51□□□□□ -0.09
CLSTN3-202ENST00000331148 FAM57AQ8TBR7 257 aa14.51□□□□□ -0.09
CLSTN3-202ENST00000331148 DPF1Q92782 380 aa14.51□□□□□ -0.09
CLSTN3-202ENST00000331148 PERPQ96FX8 193 aa14.51□□□□□ -0.09
CLSTN3-202ENST00000331148 ZNRD1Q9P1U0 126 aa14.51□□□□□ -0.09
CLSTN3-202ENST00000331148 FAM215AQ9Y5M1 114 aa14.51□□□□□ -0.09
CLSTN3-202ENST00000331148 TNCP24821 2201 aa14.51□□□□□ -0.09
CLSTN3-202ENST00000331148 CACNA1GO43497 2377 aa14.5□□□□□ -0.09
CLSTN3-202ENST00000331148 SPRNQ5BIV9 151 aa14.5□□□□□ -0.09
CLSTN3-202ENST00000331148 C1orf162Q8NEQ5 155 aaPredicted RBP14.5□□□□□ -0.09
CLSTN3-202ENST00000331148 OR2K2Q8NGT1 345 aa14.5□□□□□ -0.09
CLSTN3-202ENST00000331148 RND1Q92730 232 aa14.5□□□□□ -0.09
CLSTN3-202ENST00000331148 MRPL36Q9P0J6 103 aaKnown RBP14.5□□□□□ -0.09
CLSTN3-202ENST00000331148 HILPDAQ9Y5L2 63 aa14.5□□□□□ -0.09
CLSTN3-202ENST00000331148 SPENQ96T58 3664 aaKnown RBP14.5□□□□□ -0.09
CLSTN3-202ENST00000331148 E7EUB6 86 aa14.5□□□□□ -0.09
CLSTN3-202ENST00000331148 TCRAP04437 139 aa14.5□□□□□ -0.09
CLSTN3-202ENST00000331148 DUX4L9Q6RFH8 374 aaPredicted RBP14.5□□□□□ -0.09
CLSTN3-202ENST00000331148 BHLHA15Q7RTS1 189 aaPredicted RBP14.5□□□□□ -0.09
CLSTN3-202ENST00000331148 MOGAT3Q86VF5 341 aa14.5□□□□□ -0.09
CLSTN3-202ENST00000331148 INS-IGF2F8WCM5 200 aa14.49□□□□□ -0.09
CLSTN3-202ENST00000331148 OVOL3O00110 214 aa14.49□□□□□ -0.09
CLSTN3-202ENST00000331148 ORM2P19652 201 aa14.49□□□□□ -0.09
CLSTN3-202ENST00000331148 COL8A1P27658 744 aa14.49□□□□□ -0.09
CLSTN3-202ENST00000331148 CSN1S1P47710 185 aa14.49□□□□□ -0.09
CLSTN3-202ENST00000331148 WT1-ASQ06250 92 aa14.49□□□□□ -0.09
CLSTN3-202ENST00000331148 RBPJQ06330 500 aa14.49□□□□□ -0.09
CLSTN3-202ENST00000331148 HSD52Q0P140 79 aa14.49□□□□□ -0.09
CLSTN3-202ENST00000331148 SLC25A48Q6ZT89 311 aaKnown RBP14.49□□□□□ -0.09
CLSTN3-202ENST00000331148 OR1N2Q8NGR9 330 aa14.49□□□□□ -0.09
CLSTN3-202ENST00000331148 HARBI1Q96MB7 349 aa14.49□□□□□ -0.09
CLSTN3-202ENST00000331148 NBEAQ8NFP9 2946 aa14.49□□□□□ -0.09
CLSTN3-202ENST00000331148 FAM201AQ5SY85 155 aa14.48□□□□□ -0.09
CLSTN3-202ENST00000331148 FA2HQ7L5A8 372 aa14.48□□□□□ -0.09
CLSTN3-202ENST00000331148 Q86TA4 180 aa14.48□□□□□ -0.09
CLSTN3-202ENST00000331148 BOD1L2Q8IYS8 172 aa14.48□□□□□ -0.09
CLSTN3-202ENST00000331148 RPRMLQ8N4K4 120 aa14.48□□□□□ -0.09
CLSTN3-202ENST00000331148 OR5AN1Q8NGI8 311 aa14.48□□□□□ -0.09
CLSTN3-202ENST00000331148 JKAMPQ9P055 326 aa14.48□□□□□ -0.09
CLSTN3-202ENST00000331148 PIP4P2Q8N4L2 257 aa14.48□□□□□ -0.09
CLSTN3-202ENST00000331148 OSR1Q8TAX0 266 aaPredicted RBP14.48□□□□□ -0.09
CLSTN3-202ENST00000331148 Q9H3A6 140 aa14.48□□□□□ -0.09
CLSTN3-202ENST00000331148 INTS1Q8N201 2190 aaKnown RBP14.48□□□□□ -0.09
CLSTN3-202ENST00000331148 H3BTX0 84 aa14.47□□□□□ -0.09
CLSTN3-202ENST00000331148 LGALS7P47929 136 aa14.47□□□□□ -0.09
CLSTN3-202ENST00000331148 MSMPQ1L6U9 139 aa14.47□□□□□ -0.09
CLSTN3-202ENST00000331148 OR5A1Q8NGJ0 315 aa14.47□□□□□ -0.09
CLSTN3-202ENST00000331148 VSTM2AQ8TAG5 236 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms