RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 J3QKU1 62 aa11.67□□□□□ -0.54
TPM3-205ENST00000328159 PPP1R2P9O14990 202 aa11.67□□□□□ -0.54
TPM3-205ENST00000328159 PFN1P07737 140 aaKnown RBP11.67□□□□□ -0.54
TPM3-205ENST00000328159 S100PP25815 95 aa11.67□□□□□ -0.54
TPM3-205ENST00000328159 GNG4P50150 75 aa11.67□□□□□ -0.54
TPM3-205ENST00000328159 CRIP2P52943 208 aaPredicted RBP11.67□□□□□ -0.54
TPM3-205ENST00000328159 RANP62826 216 aaKnown RBP11.67□□□□□ -0.54
TPM3-205ENST00000328159 C15orf32Q32M92 178 aa11.67□□□□□ -0.54
TPM3-205ENST00000328159 C19orf54Q5BKX5 351 aa11.67□□□□□ -0.54
TPM3-205ENST00000328159 C9orf152Q5JTZ5 239 aa11.67□□□□□ -0.54
TPM3-205ENST00000328159 ZNF600Q6ZNG1 722 aa11.67□□□□□ -0.54
TPM3-205ENST00000328159 NECAP1Q8NC96 275 aa11.67□□□□□ -0.54
TPM3-205ENST00000328159 ZNF502Q8TBZ5 544 aa11.67□□□□□ -0.54
TPM3-205ENST00000328159 TCEAL7Q9BRU2 100 aa11.67□□□□□ -0.54
TPM3-205ENST00000328159 CENPEQ02224 2701 aa11.66□□□□□ -0.54
TPM3-205ENST00000328159 K7EN84 100 aa11.66□□□□□ -0.54
TPM3-205ENST00000328159 M0QZK8 103 aa11.66□□□□□ -0.54
TPM3-205ENST00000328159 CTSGP08311 255 aa11.66□□□□□ -0.54
TPM3-205ENST00000328159 IGHV4-31P0DP07 118 aa11.66□□□□□ -0.54
TPM3-205ENST00000328159 USF2Q15853 346 aaPredicted RBP11.66□□□□□ -0.54
TPM3-205ENST00000328159 C1QL4Q86Z23 238 aa11.66□□□□□ -0.54
TPM3-205ENST00000328159 SFRP2Q96HF1 295 aa11.66□□□□□ -0.54
TPM3-205ENST00000328159 FAM210BQ96KR6 192 aa11.66□□□□□ -0.54
TPM3-205ENST00000328159 PITPNC1Q9UKF7 332 aa11.66□□□□□ -0.54
TPM3-205ENST00000328159 ABCA12Q86UK0 2595 aa11.66□□□□□ -0.54
TPM3-205ENST00000328159 PEX7O00628 323 aa11.65□□□□□ -0.54
TPM3-205ENST00000328159 HIST1H1EP10412 219 aaKnown RBP11.65□□□□□ -0.54
TPM3-205ENST00000328159 TEX38Q6PEX7 206 aa11.65□□□□□ -0.54
TPM3-205ENST00000328159 S100A7AQ86SG5 101 aa11.65□□□□□ -0.54
TPM3-205ENST00000328159 MBD6Q96DN6 1003 aa11.65□□□□□ -0.54
TPM3-205ENST00000328159 CHRDL1Q9BU40 450 aa11.65□□□□□ -0.54
TPM3-205ENST00000328159 NAV2Q8IVL1 2488 aa11.65□□□□□ -0.54
TPM3-205ENST00000328159 DOPEY2Q9Y3R5 2298 aa11.65□□□□□ -0.55
TPM3-205ENST00000328159 PGPA6NDG6 321 aa11.64□□□□□ -0.55
TPM3-205ENST00000328159 H3BTX0 84 aa11.64□□□□□ -0.55
TPM3-205ENST00000328159 SLC25A5P05141 298 aaKnown RBP11.64□□□□□ -0.55
TPM3-205ENST00000328159 ADMP35318 185 aa11.64□□□□□ -0.55
TPM3-205ENST00000328159 SRP14P37108 136 aaKnown RBP11.64□□□□□ -0.55
TPM3-205ENST00000328159 CNN1P51911 297 aaKnown RBP11.64□□□□□ -0.55
TPM3-205ENST00000328159 IGF2BP2-AS1Q96M15 143 aa11.64□□□□□ -0.55
TPM3-205ENST00000328159 MS4A10Q96PG2 267 aa11.64□□□□□ -0.55
TPM3-205ENST00000328159 PYGO2Q9BRQ0 406 aa11.64□□□□□ -0.55
TPM3-205ENST00000328159 ZNF586Q9NXT0 402 aa11.64□□□□□ -0.55
TPM3-205ENST00000328159 EPDR1Q9UM22 224 aa11.64□□□□□ -0.55
TPM3-205ENST00000328159 IGHG2P01859 326 aa11.64□□□□□ -0.55
TPM3-205ENST00000328159 GPR183P32249 361 aa11.64□□□□□ -0.55
TPM3-205ENST00000328159 TAS2R60P59551 318 aa11.64□□□□□ -0.55
TPM3-205ENST00000328159 BPIFA4PQ86YQ2 179 aa11.64□□□□□ -0.55
TPM3-205ENST00000328159 BCL6BQ8N143 479 aaPredicted RBP11.64□□□□□ -0.55
TPM3-205ENST00000328159 OR10G8Q8NGN5 311 aa11.64□□□□□ -0.55
TPM3-205ENST00000328159 Q96MF0 132 aa11.64□□□□□ -0.55
TPM3-205ENST00000328159 Q9H3A6 140 aa11.64□□□□□ -0.55
TPM3-205ENST00000328159 GAR1Q9NY12 217 aaKnown RBP11.64□□□□□ -0.55
TPM3-205ENST00000328159 CDC42EP3Q9UKI2 254 aa11.64□□□□□ -0.55
TPM3-205ENST00000328159 CSPG4Q6UVK1 2322 aa11.64□□□□□ -0.55
TPM3-205ENST00000328159 VPS13CQ709C8 3753 aa11.64□□□□□ -0.55
TPM3-205ENST00000328159 ZNF98A6NK75 572 aa11.63□□□□□ -0.55
TPM3-205ENST00000328159 IGF1P05019 195 aa11.63□□□□□ -0.55
TPM3-205ENST00000328159 GNG5P63218 68 aa11.63□□□□□ -0.55
TPM3-205ENST00000328159 DEFB112Q30KQ8 113 aa11.63□□□□□ -0.55
TPM3-205ENST00000328159 PRSS57Q6UWY2 283 aa11.63□□□□□ -0.55
TPM3-205ENST00000328159 OR4F17Q8NGA8 305 aa11.63□□□□□ -0.55
TPM3-205ENST00000328159 EEF1AKMT3Q96AZ1 226 aa11.63□□□□□ -0.55
TPM3-205ENST00000328159 BIN3Q9NQY0 253 aa11.63□□□□□ -0.55
TPM3-205ENST00000328159 OTORQ9NRC9 128 aa11.63□□□□□ -0.55
TPM3-205ENST00000328159 LINC00527Q9UJ94 153 aa11.63□□□□□ -0.55
TPM3-205ENST00000328159 RNF24Q9Y225 148 aa11.63□□□□□ -0.55
TPM3-205ENST00000328159 TGOLN2O43493 480 aa11.62□□□□□ -0.55
TPM3-205ENST00000328159 IGLV2-8P01709 118 aa11.62□□□□□ -0.55
TPM3-205ENST00000328159 ATP5G2Q06055 141 aa11.62□□□□□ -0.55
TPM3-205ENST00000328159 KCNIP4Q6PIL6 250 aa11.62□□□□□ -0.55
TPM3-205ENST00000328159 KRTAP1-3Q8IUG1 177 aa11.62□□□□□ -0.55
TPM3-205ENST00000328159 C5orf17Q8NAS9 161 aa11.62□□□□□ -0.55
TPM3-205ENST00000328159 LINC00479Q96M42 142 aa11.62□□□□□ -0.55
TPM3-205ENST00000328159 CCDC140Q96MF4 163 aa11.62□□□□□ -0.55
TPM3-205ENST00000328159 IMMP2LQ96T52 175 aa11.62□□□□□ -0.55
TPM3-205ENST00000328159 CELSR2Q9HCU4 2923 aa11.62□□□□□ -0.55
TPM3-205ENST00000328159 MAP1AP78559 2803 aaPredicted RBP11.62□□□□□ -0.55
TPM3-205ENST00000328159 FAM223BA6NKX1 122 aa11.62□□□□□ -0.55
TPM3-205ENST00000328159 MRPS12O15235 138 aaKnown RBP11.62□□□□□ -0.55
TPM3-205ENST00000328159 GGCTO75223 188 aaKnown RBP11.62□□□□□ -0.55
TPM3-205ENST00000328159 FSHBP01225 129 aa11.62□□□□□ -0.55
TPM3-205ENST00000328159 CLEC3BP05452 202 aa11.62□□□□□ -0.55
TPM3-205ENST00000328159 IGLC2P0DOY2 106 aa11.62□□□□□ -0.55
TPM3-205ENST00000328159 OR5I1Q13606 314 aa11.62□□□□□ -0.55
TPM3-205ENST00000328159 FAM223AQ8IWN6 122 aa11.62□□□□□ -0.55
TPM3-205ENST00000328159 ZNF414Q96IQ9 312 aa11.62□□□□□ -0.55
TPM3-205ENST00000328159 PSMG3-AS1Q96PY0 264 aa11.62□□□□□ -0.55
TPM3-205ENST00000328159 PRRC2AP48634 2157 aaKnown RBP11.61□□□□□ -0.55
TPM3-205ENST00000328159 TRBV7-1A0A0A6YYK4 115 aa11.61□□□□□ -0.55
TPM3-205ENST00000328159 TRAV34A0A0B4J273 112 aa11.61□□□□□ -0.55
TPM3-205ENST00000328159 GCGP01275 180 aa11.61□□□□□ -0.55
TPM3-205ENST00000328159 BLCAPP62952 87 aa11.61□□□□□ -0.55
TPM3-205ENST00000328159 HIST2H2BCQ6DN03 193 aa11.61□□□□□ -0.55
TPM3-205ENST00000328159 CLEC19AQ6UXS0 136 aa11.61□□□□□ -0.55
TPM3-205ENST00000328159 SAV1Q9H4B6 383 aaPredicted RBP11.61□□□□□ -0.55
TPM3-205ENST00000328159 RABAC1Q9UI14 185 aa11.61□□□□□ -0.55
TPM3-205ENST00000328159 TRBV19A0A075B6N1 114 aa11.6□□□□□ -0.55
TPM3-205ENST00000328159 A0A1W2PPQ1 181 aa11.6□□□□□ -0.55
TPM3-205ENST00000328159 ISLRO14498 428 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms