RNA–Protein interactions for RNA: ENST00000328111.6

DNMT3B-202, Transcript of DNA methyltransferase 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DNMT3B, Length 4,336 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-202ENST00000328111 CHODLQ9H9P2 273 aa11.19□□□□□ -0.62
DNMT3B-202ENST00000328111 PIP4P1Q86T03 277 aa11.19□□□□□ -0.62
DNMT3B-202ENST00000328111 PHLDA3Q9Y5J5 127 aa11.19□□□□□ -0.62
DNMT3B-202ENST00000328111 PLXNB1O43157 2135 aa11.19□□□□□ -0.62
DNMT3B-202ENST00000328111 IGHV2-5P01817 119 aa11.19□□□□□ -0.62
DNMT3B-202ENST00000328111 ZNF114Q8NC26 417 aa11.19□□□□□ -0.62
DNMT3B-202ENST00000328111 C10orf142B7Z368 130 aa11.18□□□□□ -0.62
DNMT3B-202ENST00000328111 K7EM74 188 aa11.18□□□□□ -0.62
DNMT3B-202ENST00000328111 SNAI2O43623 268 aa11.18□□□□□ -0.62
DNMT3B-202ENST00000328111 C12orf54Q6X4T0 127 aa11.18□□□□□ -0.62
DNMT3B-202ENST00000328111 LINC00527Q9UJ94 153 aa11.18□□□□□ -0.62
DNMT3B-202ENST00000328111 BUB1B-PAK6H3BSN5 160 aa11.18□□□□□ -0.62
DNMT3B-202ENST00000328111 DKK4Q9UBT3 224 aa11.18□□□□□ -0.62
DNMT3B-202ENST00000328111 LOC102724200A0A096LPH7 203 aaPredicted RBP11.18□□□□□ -0.62
DNMT3B-202ENST00000328111 A6NDN8 102 aa11.18□□□□□ -0.62
DNMT3B-202ENST00000328111 SRRM4A7MD48 611 aaKnown RBP11.18□□□□□ -0.62
DNMT3B-202ENST00000328111 IGHV3-11P01762 117 aa11.18□□□□□ -0.62
DNMT3B-202ENST00000328111 GPX1P07203 203 aa11.18□□□□□ -0.62
DNMT3B-202ENST00000328111 ID1P41134 155 aa11.18□□□□□ -0.62
DNMT3B-202ENST00000328111 SPRNQ5BIV9 151 aa11.18□□□□□ -0.62
DNMT3B-202ENST00000328111 GTF2H5Q6ZYL4 71 aa11.18□□□□□ -0.62
DNMT3B-202ENST00000328111 SLC25A39Q9BZJ4 359 aaPredicted RBP11.18□□□□□ -0.62
DNMT3B-202ENST00000328111 SOX21Q9Y651 276 aaPredicted RBP11.18□□□□□ -0.62
DNMT3B-202ENST00000328111 TRBV20OR9-2A0A075B6H5 130 aa11.18□□□□□ -0.62
DNMT3B-202ENST00000328111 RHOGP84095 191 aa11.18□□□□□ -0.62
DNMT3B-202ENST00000328111 F11RQ9Y624 299 aaKnown RBP11.18□□□□□ -0.62
DNMT3B-202ENST00000328111 HIST1H1AQ02539 215 aaPredicted RBP11.17□□□□□ -0.62
DNMT3B-202ENST00000328111 Q6ZPA2 131 aa11.17□□□□□ -0.62
DNMT3B-202ENST00000328111 TRGV9Q99603 122 aa11.17□□□□□ -0.62
DNMT3B-202ENST00000328111 MIEN1Q9BRT3 115 aa11.17□□□□□ -0.62
DNMT3B-202ENST00000328111 A0A1B0GWJ7 208 aa11.17□□□□□ -0.62
DNMT3B-202ENST00000328111 TCRAP04437 139 aa11.17□□□□□ -0.62
DNMT3B-202ENST00000328111 IGKV3-20P01619 116 aa11.17□□□□□ -0.62
DNMT3B-202ENST00000328111 RPL24P83731 157 aaKnown RBP11.17□□□□□ -0.62
DNMT3B-202ENST00000328111 J3QR89 54 aa11.16□□□□□ -0.62
DNMT3B-202ENST00000328111 DIAPH2-AS1Q14236 149 aa11.16□□□□□ -0.62
DNMT3B-202ENST00000328111 TPTE2P1Q5T6R2 138 aa11.16□□□□□ -0.62
DNMT3B-202ENST00000328111 CYB5R2Q6BCY4 276 aa11.16□□□□□ -0.62
DNMT3B-202ENST00000328111 FER1L6-AS1Q8NA97 138 aa11.16□□□□□ -0.62
DNMT3B-202ENST00000328111 NDUFA4L2Q9NRX3 87 aa11.16□□□□□ -0.62
DNMT3B-202ENST00000328111 BRCA2P51587 3418 aa11.16□□□□□ -0.62
DNMT3B-202ENST00000328111 FNDC10F2Z333 226 aa11.16□□□□□ -0.62
DNMT3B-202ENST00000328111 M0R381 172 aa11.16□□□□□ -0.62
DNMT3B-202ENST00000328111 SCGB1C2P0DMR2 95 aa11.16□□□□□ -0.62
DNMT3B-202ENST00000328111 PPIFP30405 207 aaKnown RBP11.16□□□□□ -0.62
DNMT3B-202ENST00000328111 SRSF9Q13242 221 aaKnown RBP eCLIP11.16□□□□□ -0.62
DNMT3B-202ENST00000328111 Q1RN00 199 aa11.16□□□□□ -0.62
DNMT3B-202ENST00000328111 TMEM155Q4W5P6 130 aa11.16□□□□□ -0.62
DNMT3B-202ENST00000328111 OR5AN1Q8NGI8 311 aa11.16□□□□□ -0.62
DNMT3B-202ENST00000328111 LY96Q9Y6Y9 160 aa11.16□□□□□ -0.62
DNMT3B-202ENST00000328111 CNTFRP26992 372 aa11.16□□□□□ -0.62
DNMT3B-202ENST00000328111 FAM106AQ4KMX7 169 aa11.16□□□□□ -0.62
DNMT3B-202ENST00000328111 CCL19Q99731 98 aa11.16□□□□□ -0.62
DNMT3B-202ENST00000328111 C7orf69Q9H7B7 122 aa11.16□□□□□ -0.62
DNMT3B-202ENST00000328111 LAMA2P24043 3122 aaKnown RBP11.15□□□□□ -0.62
DNMT3B-202ENST00000328111 NUDT3O95989 172 aa11.15□□□□□ -0.62
DNMT3B-202ENST00000328111 WT1-ASQ06250 92 aa11.15□□□□□ -0.62
DNMT3B-202ENST00000328111 ZNF664Q8N3J9 261 aa11.15□□□□□ -0.62
DNMT3B-202ENST00000328111 ZNF502Q8TBZ5 544 aa11.15□□□□□ -0.62
DNMT3B-202ENST00000328111 Q8TCH9 128 aa11.15□□□□□ -0.62
DNMT3B-202ENST00000328111 FAM168AQ92567 244 aa11.15□□□□□ -0.62
DNMT3B-202ENST00000328111 COL25A1Q9BXS0 654 aaPredicted RBP11.15□□□□□ -0.62
DNMT3B-202ENST00000328111 NPIPB5A8MRT5 1133 aa11.15□□□□□ -0.62
DNMT3B-202ENST00000328111 M0R3E3 92 aa11.15□□□□□ -0.62
DNMT3B-202ENST00000328111 LINC00614P0C842 121 aa11.15□□□□□ -0.62
DNMT3B-202ENST00000328111 LOXP28300 417 aaPredicted RBP11.15□□□□□ -0.62
DNMT3B-202ENST00000328111 DGAT2L7PQ6IED9 249 aa11.15□□□□□ -0.62
DNMT3B-202ENST00000328111 NIT1Q86X76 327 aa11.15□□□□□ -0.62
DNMT3B-202ENST00000328111 NUP35Q8NFH5 326 aa11.15□□□□□ -0.62
DNMT3B-202ENST00000328111 FBLL1A6NHQ2 334 aaKnown RBP11.15□□□□□ -0.63
DNMT3B-202ENST00000328111 OR10J3Q5JRS4 329 aa11.15□□□□□ -0.63
DNMT3B-202ENST00000328111 Q6AWC8 147 aa11.15□□□□□ -0.63
DNMT3B-202ENST00000328111 ORMDL3Q8N138 153 aa11.15□□□□□ -0.63
DNMT3B-202ENST00000328111 RAB37Q96AX2 223 aa11.15□□□□□ -0.63
DNMT3B-202ENST00000328111 MYO9AB2RTY4 2548 aa11.14□□□□□ -0.63
DNMT3B-202ENST00000328111 C7orf71A4D174 169 aa11.14□□□□□ -0.63
DNMT3B-202ENST00000328111 RPL15P61313 204 aaKnown RBP11.14□□□□□ -0.63
DNMT3B-202ENST00000328111 C5orf64Q2M2E5 130 aa11.14□□□□□ -0.63
DNMT3B-202ENST00000328111 VMO1Q7Z5L0 202 aa11.14□□□□□ -0.63
DNMT3B-202ENST00000328111 ZNF414Q96IQ9 312 aa11.14□□□□□ -0.63
DNMT3B-202ENST00000328111 NCOR1P1Q9H4R4 102 aa11.14□□□□□ -0.63
DNMT3B-202ENST00000328111 TPSG1Q9NRR2 321 aa11.14□□□□□ -0.63
DNMT3B-202ENST00000328111 GGTLC3B5MD39 225 aa11.14□□□□□ -0.63
DNMT3B-202ENST00000328111 LCN12Q6JVE5 192 aa11.14□□□□□ -0.63
DNMT3B-202ENST00000328111 EBLN2Q6P2I7 272 aa11.14□□□□□ -0.63
DNMT3B-202ENST00000328111 GCSHP23434 173 aa11.14□□□□□ -0.63
DNMT3B-202ENST00000328111 WNK1Q9H4A3 2382 aa11.14□□□□□ -0.63
DNMT3B-202ENST00000328111 FABP5P3A8MUU1 101 aa11.13□□□□□ -0.63
DNMT3B-202ENST00000328111 ASCL2Q99929 193 aa11.13□□□□□ -0.63
DNMT3B-202ENST00000328111 DYSFO75923 2080 aa11.13□□□□□ -0.63
DNMT3B-202ENST00000328111 C15orf32Q32M92 178 aa11.13□□□□□ -0.63
DNMT3B-202ENST00000328111 LAMTOR2Q9Y2Q5 125 aa11.13□□□□□ -0.63
DNMT3B-202ENST00000328111 IGFL2Q6UWQ7 119 aa11.13□□□□□ -0.63
DNMT3B-202ENST00000328111 ZNF833PQ6ZTB9 187 aa11.13□□□□□ -0.63
DNMT3B-202ENST00000328111 TMEM219Q86XT9 240 aa11.13□□□□□ -0.63
DNMT3B-202ENST00000328111 DYNLRB2Q8TF09 96 aa11.13□□□□□ -0.63
DNMT3B-202ENST00000328111 IGKV2-40A0A087WW87 121 aaPredicted RBP11.12□□□□□ -0.63
DNMT3B-202ENST00000328111 IGKV2D-40P01614 121 aaPredicted RBP11.12□□□□□ -0.63
DNMT3B-202ENST00000328111 FAM74A4Q5TZK3 123 aa11.12□□□□□ -0.63
DNMT3B-202ENST00000328111 CCDC168Q8NDH2 2452 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms