RNA–Protein interactions for RNA: ENST00000326828.5

CHRNA3-201, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA3, Length 3,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-201ENST00000326828 NKX2-8O15522 239 aa11.49□□□□□ -0.57
CHRNA3-201ENST00000326828 LIPFP07098 398 aa11.49□□□□□ -0.57
CHRNA3-201ENST00000326828 CGB3P0DN86 165 aa11.49□□□□□ -0.57
CHRNA3-201ENST00000326828 CGB7P0DN87 165 aa11.49□□□□□ -0.57
CHRNA3-201ENST00000326828 NHLH1Q02575 133 aa11.49□□□□□ -0.57
CHRNA3-201ENST00000326828 ZPBPQ9BS86 351 aa11.49□□□□□ -0.57
CHRNA3-201ENST00000326828 NDUFA4L2Q9NRX3 87 aa11.49□□□□□ -0.57
CHRNA3-201ENST00000326828 F11RQ9Y624 299 aaKnown RBP11.49□□□□□ -0.57
CHRNA3-201ENST00000326828 IGKV1D-37A0A075B6S9 117 aa11.49□□□□□ -0.57
CHRNA3-201ENST00000326828 FBLL1A6NHQ2 334 aaKnown RBP11.49□□□□□ -0.57
CHRNA3-201ENST00000326828 ARMS2P0C7Q2 107 aa11.49□□□□□ -0.57
CHRNA3-201ENST00000326828 WT1P19544 449 aaPredicted RBP11.49□□□□□ -0.57
CHRNA3-201ENST00000326828 MZT1Q08AG7 82 aa11.49□□□□□ -0.57
CHRNA3-201ENST00000326828 RBPMS2Q6ZRY4 209 aaKnown RBP11.49□□□□□ -0.57
CHRNA3-201ENST00000326828 C22orf46C9J442 243 aa11.48□□□□□ -0.57
CHRNA3-201ENST00000326828 SPRY4Q9C004 299 aa11.48□□□□□ -0.57
CHRNA3-201ENST00000326828 RNF7Q9UBF6 113 aa11.48□□□□□ -0.57
CHRNA3-201ENST00000326828 PROCRQ9UNN8 238 aa11.48□□□□□ -0.57
CHRNA3-201ENST00000326828 TECTAO75443 2155 aa11.48□□□□□ -0.57
CHRNA3-201ENST00000326828 K7ERU9 68 aa11.48□□□□□ -0.57
CHRNA3-201ENST00000326828 MBNL2Q5VZF2 373 aaKnown RBP11.48□□□□□ -0.57
CHRNA3-201ENST00000326828 FA2HQ7L5A8 372 aa11.48□□□□□ -0.57
CHRNA3-201ENST00000326828 RPRMLQ8N4K4 120 aa11.48□□□□□ -0.57
CHRNA3-201ENST00000326828 ZNF714Q96N38 554 aa11.48□□□□□ -0.57
CHRNA3-201ENST00000326828 C7orf69Q9H7B7 122 aa11.48□□□□□ -0.57
CHRNA3-201ENST00000326828 AP5S1Q9NUS5 200 aa11.48□□□□□ -0.57
CHRNA3-201ENST00000326828 RHOGP84095 191 aa11.48□□□□□ -0.57
CHRNA3-201ENST00000326828 FDCSPQ8NFU4 85 aa11.48□□□□□ -0.57
CHRNA3-201ENST00000326828 RPUSD1Q9UJJ7 312 aaKnown RBP11.48□□□□□ -0.57
CHRNA3-201ENST00000326828 NBASA2RRP1 2371 aa11.48□□□□□ -0.57
CHRNA3-201ENST00000326828 GOSR1O95249 250 aa11.47□□□□□ -0.57
CHRNA3-201ENST00000326828 LOXL1Q08397 574 aaPredicted RBP11.47□□□□□ -0.57
CHRNA3-201ENST00000326828 GUSBP1Q15486 140 aa11.47□□□□□ -0.57
CHRNA3-201ENST00000326828 SLC25A48Q6ZT89 311 aaKnown RBP11.47□□□□□ -0.57
CHRNA3-201ENST00000326828 CACNG8Q8WXS5 425 aa11.47□□□□□ -0.57
CHRNA3-201ENST00000326828 PERPQ96FX8 193 aa11.47□□□□□ -0.57
CHRNA3-201ENST00000326828 GAFA1Q96PS6 74 aa11.47□□□□□ -0.57
CHRNA3-201ENST00000326828 S4R3C0 116 aa11.47□□□□□ -0.57
CHRNA3-201ENST00000326828 FNDC10F2Z333 226 aa11.47□□□□□ -0.57
CHRNA3-201ENST00000326828 CFHR2P36980 270 aa11.47□□□□□ -0.57
CHRNA3-201ENST00000326828 ATP5L2Q7Z4Y8 100 aa11.47□□□□□ -0.57
CHRNA3-201ENST00000326828 THYN1Q9P016 225 aa11.47□□□□□ -0.57
CHRNA3-201ENST00000326828 PEF1Q9UBV8 284 aaKnown RBP11.47□□□□□ -0.57
CHRNA3-201ENST00000326828 TCRAP04437 139 aa11.47□□□□□ -0.57
CHRNA3-201ENST00000326828 NMUP48645 174 aa11.47□□□□□ -0.57
CHRNA3-201ENST00000326828 HIST1H1AQ02539 215 aaPredicted RBP11.47□□□□□ -0.57
CHRNA3-201ENST00000326828 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.47□□□□□ -0.57
CHRNA3-201ENST00000326828 CHCHD1Q96BP2 118 aaKnown RBP11.47□□□□□ -0.57
CHRNA3-201ENST00000326828 HSPB8Q9UJY1 196 aa11.47□□□□□ -0.57
CHRNA3-201ENST00000326828 A0A1W2PPI3 338 aa11.46□□□□□ -0.57
CHRNA3-201ENST00000326828 CGB1A6NKQ9 187 aa11.46□□□□□ -0.58
CHRNA3-201ENST00000326828 PPBPP02775 128 aa11.46□□□□□ -0.58
CHRNA3-201ENST00000326828 IFI27P40305 119 aaPredicted RBP11.46□□□□□ -0.58
CHRNA3-201ENST00000326828 SUB1P53999 127 aaKnown RBP eCLIP11.46□□□□□ -0.58
CHRNA3-201ENST00000326828 TMEM97Q5BJF2 176 aa11.46□□□□□ -0.58
CHRNA3-201ENST00000326828 C17orf77Q96MU5 243 aa11.46□□□□□ -0.58
CHRNA3-201ENST00000326828 CSTL1Q9H114 145 aa11.46□□□□□ -0.58
CHRNA3-201ENST00000326828 ZNF71Q9NQZ8 489 aaPredicted RBP11.46□□□□□ -0.58
CHRNA3-201ENST00000326828 DSCAML1Q8TD84 2053 aa11.45□□□□□ -0.58
CHRNA3-201ENST00000326828 SVEP1Q4LDE5 3571 aa11.45□□□□□ -0.58
CHRNA3-201ENST00000326828 CD5LO43866 347 aa11.45□□□□□ -0.58
CHRNA3-201ENST00000326828 RBP4P02753 201 aa11.45□□□□□ -0.58
CHRNA3-201ENST00000326828 POU2AF1Q16633 256 aa11.45□□□□□ -0.58
CHRNA3-201ENST00000326828 CR1LQ2VPA4 569 aa11.45□□□□□ -0.58
CHRNA3-201ENST00000326828 CNTFRP26992 372 aa11.45□□□□□ -0.58
CHRNA3-201ENST00000326828 FAM162BQ5T6X4 162 aa11.45□□□□□ -0.58
CHRNA3-201ENST00000326828 C5orf17Q8NAS9 161 aa11.45□□□□□ -0.58
CHRNA3-201ENST00000326828 K7EMI3 77 aa11.45□□□□□ -0.58
CHRNA3-201ENST00000326828 CRXO43186 299 aaPredicted RBP11.45□□□□□ -0.58
CHRNA3-201ENST00000326828 RAB9BQ9NP90 201 aa11.45□□□□□ -0.58
CHRNA3-201ENST00000326828 ABCA4P78363 2273 aa11.44□□□□□ -0.58
CHRNA3-201ENST00000326828 C22orf34Q6ZV56 151 aa11.44□□□□□ -0.58
CHRNA3-201ENST00000326828 C2orf91Q6ZV80 131 aa11.44□□□□□ -0.58
CHRNA3-201ENST00000326828 NEU4Q8WWR8 484 aaPredicted RBP11.44□□□□□ -0.58
CHRNA3-201ENST00000326828 CCL17Q92583 94 aa11.44□□□□□ -0.58
CHRNA3-201ENST00000326828 JMJD8Q96S16 334 aa11.44□□□□□ -0.58
CHRNA3-201ENST00000326828 RABAC1Q9UI14 185 aa11.44□□□□□ -0.58
CHRNA3-201ENST00000326828 LRBAP50851 2863 aa11.44□□□□□ -0.58
CHRNA3-201ENST00000326828 IGLV1-44P01699 117 aa11.44□□□□□ -0.58
CHRNA3-201ENST00000326828 IGHV1-46P01743 117 aa11.44□□□□□ -0.58
CHRNA3-201ENST00000326828 CACNG7P62955 275 aa11.44□□□□□ -0.58
CHRNA3-201ENST00000326828 PET117Q6UWS5 81 aa11.44□□□□□ -0.58
CHRNA3-201ENST00000326828 C1orf210Q8IVY1 113 aa11.44□□□□□ -0.58
CHRNA3-201ENST00000326828 OSR1Q8TAX0 266 aaPredicted RBP11.44□□□□□ -0.58
CHRNA3-201ENST00000326828 C18orf15Q96N68 181 aa11.44□□□□□ -0.58
CHRNA3-201ENST00000326828 MLST8Q9BVC4 326 aa11.44□□□□□ -0.58
CHRNA3-201ENST00000326828 SLC25A15Q9Y619 301 aa11.44□□□□□ -0.58
CHRNA3-201ENST00000326828 MALRD1Q5VYJ5 2156 aa11.43□□□□□ -0.58
CHRNA3-201ENST00000326828 LHBP01229 141 aa11.43□□□□□ -0.58
CHRNA3-201ENST00000326828 OR4C13Q8NGP0 309 aa11.43□□□□□ -0.58
CHRNA3-201ENST00000326828 ACACAQ13085 2346 aa11.43□□□□□ -0.58
CHRNA3-201ENST00000326828 SMKR1H3BMG3 65 aa11.43□□□□□ -0.58
CHRNA3-201ENST00000326828 FSTL3O95633 263 aa11.43□□□□□ -0.58
CHRNA3-201ENST00000326828 TNFRSF1AP19438 455 aa11.43□□□□□ -0.58
CHRNA3-201ENST00000326828 RPL24P83731 157 aaKnown RBP11.43□□□□□ -0.58
CHRNA3-201ENST00000326828 FAM222BQ8WU58 562 aa11.43□□□□□ -0.58
CHRNA3-201ENST00000326828 IGFBPL1Q8WX77 278 aa11.43□□□□□ -0.58
CHRNA3-201ENST00000326828 TTTY13Q9BZ97 58 aa11.43□□□□□ -0.58
CHRNA3-201ENST00000326828 RAI1Q7Z5J4 1906 aaPredicted RBP11.42□□□□□ -0.58
CHRNA3-201ENST00000326828 A0A1B0GUT8 65 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms