RNA–Protein interactions for RNA: ENST00000324238.6

CRLF3-201, Transcript of cytokine receptor like factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRLF3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-201ENST00000324238 CSN3P07498 182 aa15.9■□□□□ 0.14
CRLF3-201ENST00000324238 IGLL1P15814 213 aa15.9■□□□□ 0.14
CRLF3-201ENST00000324238 CIARTQ8N365 385 aaPredicted RBP15.9■□□□□ 0.14
CRLF3-201ENST00000324238 OR1L4Q8NGR5 311 aa15.9■□□□□ 0.14
CRLF3-201ENST00000324238 THBDP07204 575 aa15.9■□□□□ 0.14
CRLF3-201ENST00000324238 SSX8Q7RTT4 187 aa15.9■□□□□ 0.14
CRLF3-201ENST00000324238 DYNLRB1Q9NP97 96 aa15.9■□□□□ 0.14
CRLF3-201ENST00000324238 NDUFB3O43676 98 aa15.9■□□□□ 0.14
CRLF3-201ENST00000324238 CRYABP02511 175 aaKnown RBP15.9■□□□□ 0.14
CRLF3-201ENST00000324238 TNFRSF1AP19438 455 aa15.9■□□□□ 0.14
CRLF3-201ENST00000324238 CEACAM8P31997 349 aaPredicted RBP15.9■□□□□ 0.14
CRLF3-201ENST00000324238 WASHC3Q9Y3C0 194 aa15.9■□□□□ 0.14
CRLF3-201ENST00000324238 MRGPRG-AS1Q2M3A8 158 aa15.89■□□□□ 0.13
CRLF3-201ENST00000324238 PRSS33Q8NF86 280 aa15.89■□□□□ 0.13
CRLF3-201ENST00000324238 TSPOP30536 169 aa15.89■□□□□ 0.13
CRLF3-201ENST00000324238 LYZP61626 148 aa15.89■□□□□ 0.13
CRLF3-201ENST00000324238 C7orf69Q9H7B7 122 aa15.89■□□□□ 0.13
CRLF3-201ENST00000324238 IGFL3Q6UXB1 125 aa15.88■□□□□ 0.13
CRLF3-201ENST00000324238 hDV102S1A0JD36 115 aa15.88■□□□□ 0.13
CRLF3-201ENST00000324238 TMEM178BH3BS89 294 aa15.88■□□□□ 0.13
CRLF3-201ENST00000324238 SUB1P53999 127 aaKnown RBP eCLIP15.88■□□□□ 0.13
CRLF3-201ENST00000324238 IGLC7A0M8Q6 106 aa15.87■□□□□ 0.13
CRLF3-201ENST00000324238 LY6HO94772 140 aa15.87■□□□□ 0.13
CRLF3-201ENST00000324238 HIST1H1EP10412 219 aaKnown RBP15.87■□□□□ 0.13
CRLF3-201ENST00000324238 COX7A1P24310 79 aa15.87■□□□□ 0.13
CRLF3-201ENST00000324238 LOXP28300 417 aaPredicted RBP15.87■□□□□ 0.13
CRLF3-201ENST00000324238 C17orf77Q96MU5 243 aa15.87■□□□□ 0.13
CRLF3-201ENST00000324238 C2orf70A6NJV1 201 aa15.87■□□□□ 0.13
CRLF3-201ENST00000324238 PRNTQ86SH4 94 aa15.87■□□□□ 0.13
CRLF3-201ENST00000324238 TPPP3Q9BW30 176 aa15.87■□□□□ 0.13
CRLF3-201ENST00000324238 Q9H3A6 140 aa15.87■□□□□ 0.13
CRLF3-201ENST00000324238 VMA21Q3ZAQ7 101 aa15.86■□□□□ 0.13
CRLF3-201ENST00000324238 COX19Q49B96 90 aa15.86■□□□□ 0.13
CRLF3-201ENST00000324238 LRRC10Q5BKY1 277 aa15.86■□□□□ 0.13
CRLF3-201ENST00000324238 ZFP30Q9Y2G7 519 aa15.86■□□□□ 0.13
CRLF3-201ENST00000324238 P01737 135 aa15.86■□□□□ 0.13
CRLF3-201ENST00000324238 BTF3P20290 206 aaKnown RBP15.86■□□□□ 0.13
CRLF3-201ENST00000324238 MYCNOSP40205 109 aa15.86■□□□□ 0.13
CRLF3-201ENST00000324238 PERPQ96FX8 193 aa15.86■□□□□ 0.13
CRLF3-201ENST00000324238 GPR82Q96P67 336 aa15.86■□□□□ 0.13
CRLF3-201ENST00000324238 TCF15Q12870 199 aa15.85■□□□□ 0.13
CRLF3-201ENST00000324238 GOLT1AQ6ZVE7 132 aa15.85■□□□□ 0.13
CRLF3-201ENST00000324238 VSTM2AQ8TAG5 236 aa15.85■□□□□ 0.13
CRLF3-201ENST00000324238 FBXL15Q9H469 300 aa15.85■□□□□ 0.13
CRLF3-201ENST00000324238 RBP4P02753 201 aa15.85■□□□□ 0.13
CRLF3-201ENST00000324238 TCTAP57738 103 aa15.85■□□□□ 0.13
CRLF3-201ENST00000324238 FAM231DQ6ZW35 169 aa15.85■□□□□ 0.13
CRLF3-201ENST00000324238 RPP21Q9H633 154 aaKnown RBP15.85■□□□□ 0.13
CRLF3-201ENST00000324238 LINC01560Q8TB33 94 aa15.84■□□□□ 0.13
CRLF3-201ENST00000324238 MRPL27Q9P0M9 148 aaKnown RBP15.84■□□□□ 0.13
CRLF3-201ENST00000324238 MUC21A0A0G2JKD1 596 aa15.84■□□□□ 0.13
CRLF3-201ENST00000324238 MUC21A0A140T8X8 626 aa15.84■□□□□ 0.13
CRLF3-201ENST00000324238 CCL25O15444 150 aa15.84■□□□□ 0.13
CRLF3-201ENST00000324238 CA7P43166 264 aa15.84■□□□□ 0.13
CRLF3-201ENST00000324238 MEF2CQ06413 473 aaPredicted RBP15.84■□□□□ 0.13
CRLF3-201ENST00000324238 MUC21Q5SSG8 566 aa15.84■□□□□ 0.13
CRLF3-201ENST00000324238 THAP8Q8NA92 274 aa15.84■□□□□ 0.13
CRLF3-201ENST00000324238 RPL27AP46776 148 aaKnown RBP15.84■□□□□ 0.13
CRLF3-201ENST00000324238 HBBP68871 147 aa15.84■□□□□ 0.13
CRLF3-201ENST00000324238 OR8B3Q8NGG8 313 aa15.84■□□□□ 0.13
CRLF3-201ENST00000324238 TMEM186Q96B77 213 aa15.84■□□□□ 0.13
CRLF3-201ENST00000324238 DAZAP1Q96EP5 407 aaKnown RBP15.84■□□□□ 0.13
CRLF3-201ENST00000324238 TRAV9-2A0A087WT02 112 aa15.83■□□□□ 0.12
CRLF3-201ENST00000324238 PSG1P11464 419 aa15.83■□□□□ 0.12
CRLF3-201ENST00000324238 ATP5IP56385 69 aaPredicted RBP15.83■□□□□ 0.12
CRLF3-201ENST00000324238 WIPF2Q8TF74 440 aaPredicted RBP15.83■□□□□ 0.12
CRLF3-201ENST00000324238 TCRAP04437 139 aa15.83■□□□□ 0.12
CRLF3-201ENST00000324238 IGHV1-8P0DP01 117 aa15.83■□□□□ 0.12
CRLF3-201ENST00000324238 FOXC1Q12948 553 aa15.83■□□□□ 0.12
CRLF3-201ENST00000324238 KLHDC1Q8N7A1 406 aa15.83■□□□□ 0.12
CRLF3-201ENST00000324238 A0A1B0GXF2 115 aa15.82■□□□□ 0.12
CRLF3-201ENST00000324238 SNAI2O43623 268 aa15.82■□□□□ 0.12
CRLF3-201ENST00000324238 GRNP28799 593 aaKnown RBP15.82■□□□□ 0.12
CRLF3-201ENST00000324238 GAGE1Q13065 139 aa15.82■□□□□ 0.12
CRLF3-201ENST00000324238 KLF17Q5JT82 389 aaPredicted RBP15.82■□□□□ 0.12
CRLF3-201ENST00000324238 OR4C46A6NHA9 309 aa15.82■□□□□ 0.12
CRLF3-201ENST00000324238 GP9P14770 177 aa15.82■□□□□ 0.12
CRLF3-201ENST00000324238 COL8A1P27658 744 aa15.82■□□□□ 0.12
CRLF3-201ENST00000324238 PTTG1IPP53801 180 aa15.82■□□□□ 0.12
CRLF3-201ENST00000324238 Q8NA96 180 aa15.82■□□□□ 0.12
CRLF3-201ENST00000324238 ZNF596Q8TC21 504 aa15.82■□□□□ 0.12
CRLF3-201ENST00000324238 RNASE6Q93091 150 aaKnown RBP15.82■□□□□ 0.12
CRLF3-201ENST00000324238 IGHV1-24A0A0C4DH33 117 aa15.81■□□□□ 0.12
CRLF3-201ENST00000324238 BCL6BQ8N143 479 aaPredicted RBP15.81■□□□□ 0.12
CRLF3-201ENST00000324238 MLST8Q9BVC4 326 aa15.81■□□□□ 0.12
CRLF3-201ENST00000324238 E7EQL1 145 aa15.81■□□□□ 0.12
CRLF3-201ENST00000324238 FAM120AOSQ5T036 256 aa15.81■□□□□ 0.12
CRLF3-201ENST00000324238 CELSR1Q9NYQ6 3014 aa15.81■□□□□ 0.12
CRLF3-201ENST00000324238 SELENOKQ9Y6D0 94 aa15.81■□□□□ 0.12
CRLF3-201ENST00000324238 PLGLAQ15195 96 aa15.8■□□□□ 0.12
CRLF3-201ENST00000324238 TMEM70Q9BUB7 260 aa15.8■□□□□ 0.12
CRLF3-201ENST00000324238 INSIG2Q9Y5U4 225 aa15.8■□□□□ 0.12
CRLF3-201ENST00000324238 TMSB15BA0A087X1C1 80 aa15.8■□□□□ 0.12
CRLF3-201ENST00000324238 A8MWL6 223 aa15.8■□□□□ 0.12
CRLF3-201ENST00000324238 CHEK1O14757 476 aa15.8■□□□□ 0.12
CRLF3-201ENST00000324238 KLF5Q13887 457 aaPredicted RBP15.8■□□□□ 0.12
CRLF3-201ENST00000324238 NUP37Q8NFH4 326 aa15.8■□□□□ 0.12
CRLF3-201ENST00000324238 C20orf202A1L168 122 aa15.79■□□□□ 0.12
CRLF3-201ENST00000324238 FAM90A27PA6NNH2 459 aa15.79■□□□□ 0.12
CRLF3-201ENST00000324238 FXYD7P58549 80 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms