RNA–Protein interactions for RNA: ENST00000323144.11

TPM3-204, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-204ENST00000323144 ACOT7LQ6ZUV0 252 aa8.84□□□□□ -0.99
TPM3-204ENST00000323144 TOMM5Q8N4H5 51 aa8.84□□□□□ -0.99
TPM3-204ENST00000323144 PPP1R14BQ96C90 147 aa8.84□□□□□ -0.99
TPM3-204ENST00000323144 C17orf77Q96MU5 243 aa8.84□□□□□ -0.99
TPM3-204ENST00000323144 TRGV9Q99603 122 aa8.84□□□□□ -0.99
TPM3-204ENST00000323144 RNF126Q9BV68 326 aa8.84□□□□□ -0.99
TPM3-204ENST00000323144 SEPSECSQ9HD40 501 aaKnown RBP8.84□□□□□ -0.99
TPM3-204ENST00000323144 NACAE9PAV3 2078 aa8.84□□□□□ -0.99
TPM3-204ENST00000323144 SFT2D2O95562 160 aa8.83□□□□□ -1
TPM3-204ENST00000323144 HOXB5P09067 269 aa8.83□□□□□ -1
TPM3-204ENST00000323144 GATA2P23769 480 aaPredicted RBP8.83□□□□□ -1
TPM3-204ENST00000323144 GPX4P36969 197 aaPredicted RBP8.83□□□□□ -1
TPM3-204ENST00000323144 NUTF2P61970 127 aaKnown RBP8.83□□□□□ -1
TPM3-204ENST00000323144 TMEM182Q6ZP80 229 aaPredicted RBP8.83□□□□□ -1
TPM3-204ENST00000323144 LRTM2Q8N967 370 aa8.83□□□□□ -1
TPM3-204ENST00000323144 OR4B1Q8NGF8 309 aa8.83□□□□□ -1
TPM3-204ENST00000323144 SLC25A22Q9H936 323 aa8.83□□□□□ -1
TPM3-204ENST00000323144 PKHD1P08F94 4074 aa8.82□□□□□ -1
TPM3-204ENST00000323144 WRBO00258 174 aa8.82□□□□□ -1
TPM3-204ENST00000323144 ADAP1O75689 374 aa8.82□□□□□ -1
TPM3-204ENST00000323144 AP3S2P59780 193 aa8.82□□□□□ -1
TPM3-204ENST00000323144 RAB11AP62491 216 aa8.82□□□□□ -1
TPM3-204ENST00000323144 FAM78BQ5VT40 261 aa8.82□□□□□ -1
TPM3-204ENST00000323144 GGNBP1Q5YKI7 109 aa8.82□□□□□ -1
TPM3-204ENST00000323144 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.82□□□□□ -1
TPM3-204ENST00000323144 CENPSQ8N2Z9 138 aa8.82□□□□□ -1
TPM3-204ENST00000323144 RBM38Q9H0Z9 239 aaKnown RBP8.82□□□□□ -1
TPM3-204ENST00000323144 KIAA1109Q2LD37 5005 aa8.82□□□□□ -1
TPM3-204ENST00000323144 A0A0J9YX75 114 aa8.81□□□□□ -1
TPM3-204ENST00000323144 ISLRO14498 428 aa8.81□□□□□ -1
TPM3-204ENST00000323144 SYNGR2O43760 224 aa8.81□□□□□ -1
TPM3-204ENST00000323144 CCNKO75909 580 aa8.81□□□□□ -1
TPM3-204ENST00000323144 FABP1P07148 127 aa8.81□□□□□ -1
TPM3-204ENST00000323144 PRB4P10163 310 aaPredicted RBP8.81□□□□□ -1
TPM3-204ENST00000323144 SLC25A6P12236 298 aa8.81□□□□□ -1
TPM3-204ENST00000323144 PAX9P55771 341 aa8.81□□□□□ -1
TPM3-204ENST00000323144 AKR1C1Q04828 323 aa8.81□□□□□ -1
TPM3-204ENST00000323144 C1orf194Q5T5A4 169 aa8.81□□□□□ -1
TPM3-204ENST00000323144 CCDC190Q86UF4 302 aa8.81□□□□□ -1
TPM3-204ENST00000323144 OR8I2Q8N0Y5 310 aa8.81□□□□□ -1
TPM3-204ENST00000323144 C1orf158Q8N1D5 194 aa8.81□□□□□ -1
TPM3-204ENST00000323144 NEU1Q99519 415 aa8.81□□□□□ -1
TPM3-204ENST00000323144 DOK5Q9P104 306 aa8.81□□□□□ -1
TPM3-204ENST00000323144 RFNGQ9Y644 331 aa8.81□□□□□ -1
TPM3-204ENST00000323144 DNAH17Q9UFH2 4485 aa8.81□□□□□ -1
TPM3-204ENST00000323144 CCDC160A6NGH7 325 aa8.8□□□□□ -1
TPM3-204ENST00000323144 A8MTW9 85 aa8.8□□□□□ -1
TPM3-204ENST00000323144 H3BRN7 92 aa8.8□□□□□ -1
TPM3-204ENST00000323144 ID1P41134 155 aa8.8□□□□□ -1
TPM3-204ENST00000323144 ATP5IP56385 69 aaPredicted RBP8.8□□□□□ -1
TPM3-204ENST00000323144 SPANXN5Q5MJ07 72 aa8.8□□□□□ -1
TPM3-204ENST00000323144 FAM222AQ5U5X8 452 aa8.8□□□□□ -1
TPM3-204ENST00000323144 IGFL4Q6B9Z1 124 aa8.8□□□□□ -1
TPM3-204ENST00000323144 AMTNQ6UX39 209 aa8.8□□□□□ -1
TPM3-204ENST00000323144 RNF182Q8N6D2 247 aa8.8□□□□□ -1
TPM3-204ENST00000323144 C16orf92Q96LL3 132 aa8.8□□□□□ -1
TPM3-204ENST00000323144 NDUFAF3Q9BU61 184 aa8.8□□□□□ -1
TPM3-204ENST00000323144 SRRQ9GZT4 340 aa8.8□□□□□ -1
TPM3-204ENST00000323144 PLA2G2EQ9NZK7 142 aa8.8□□□□□ -1
TPM3-204ENST00000323144 DKK2Q9UBU2 259 aa8.8□□□□□ -1
TPM3-204ENST00000323144 TMED3Q9Y3Q3 217 aa8.8□□□□□ -1
TPM3-204ENST00000323144 TRAV8-2A0A0B4J237 113 aa8.79□□□□□ -1
TPM3-204ENST00000323144 LOC102723971A0A1B0GUV8 181 aa8.79□□□□□ -1
TPM3-204ENST00000323144 A0A1B0GVY2 172 aa8.79□□□□□ -1
TPM3-204ENST00000323144 SMCO3A2RU48 225 aa8.79□□□□□ -1
TPM3-204ENST00000323144 ZNF98A6NK75 572 aa8.79□□□□□ -1
TPM3-204ENST00000323144 SNRPGP15A8MWD9 76 aa8.79□□□□□ -1
TPM3-204ENST00000323144 SSSCA1O60232 199 aa8.79□□□□□ -1
TPM3-204ENST00000323144 MED6O75586 246 aa8.79□□□□□ -1
TPM3-204ENST00000323144 HTN3P15516 51 aa8.79□□□□□ -1
TPM3-204ENST00000323144 ORM2P19652 201 aa8.79□□□□□ -1
TPM3-204ENST00000323144 POLR2GP62487 172 aaKnown RBP eCLIP8.79□□□□□ -1
TPM3-204ENST00000323144 PSG9Q00887 426 aa8.79□□□□□ -1
TPM3-204ENST00000323144 OR1B1Q8NGR6 318 aa8.79□□□□□ -1
TPM3-204ENST00000323144 CLUHP3Q96NS8 147 aa8.79□□□□□ -1
TPM3-204ENST00000323144 CIB3Q96Q77 187 aaPredicted RBP8.79□□□□□ -1
TPM3-204ENST00000323144 SLC25A21Q9BQT8 299 aaPredicted RBP8.79□□□□□ -1
TPM3-204ENST00000323144 PFDN2Q9UHV9 154 aa8.79□□□□□ -1
TPM3-204ENST00000323144 FLVCR2Q9UPI3 526 aa8.79□□□□□ -1
TPM3-204ENST00000323144 YTHDF2Q9Y5A9 579 aaKnown RBP8.79□□□□□ -1
TPM3-204ENST00000323144 C9orf170A2RU37 121 aa8.78□□□□□ -1
TPM3-204ENST00000323144 M0R2N4 97 aa8.78□□□□□ -1
TPM3-204ENST00000323144 M0R2Z0 102 aa8.78□□□□□ -1
TPM3-204ENST00000323144 RTL8CO15255 209 aa8.78□□□□□ -1
TPM3-204ENST00000323144 PRM2P04554 102 aa8.78□□□□□ -1
TPM3-204ENST00000323144 SPART-AS1P0CW21 52 aa8.78□□□□□ -1
TPM3-204ENST00000323144 BTCP35070 178 aa8.78□□□□□ -1
TPM3-204ENST00000323144 GALR1P47211 349 aa8.78□□□□□ -1
TPM3-204ENST00000323144 UBE2MP61081 183 aaKnown RBP8.78□□□□□ -1
TPM3-204ENST00000323144 SPINK13Q1W4C9 94 aa8.78□□□□□ -1
TPM3-204ENST00000323144 EBLN2Q6P2I7 272 aa8.78□□□□□ -1
TPM3-204ENST00000323144 BAP18Q8IXM2 172 aa8.78□□□□□ -1
TPM3-204ENST00000323144 POM121L12Q8N7R1 296 aa8.78□□□□□ -1
TPM3-204ENST00000323144 BPIFCQ8NFQ6 507 aa8.78□□□□□ -1
TPM3-204ENST00000323144 UHRF2Q96PU4 802 aa8.78□□□□□ -1
TPM3-204ENST00000323144 RSG1Q9BU20 258 aa8.78□□□□□ -1
TPM3-204ENST00000323144 TMEM147Q9BVK8 224 aa8.78□□□□□ -1
TPM3-204ENST00000323144 RPRMQ9NS64 109 aa8.78□□□□□ -1
TPM3-204ENST00000323144 GOLT1BQ9Y3E0 138 aa8.78□□□□□ -1
TPM3-204ENST00000323144 DYNC1H1Q14204 4646 aaKnown RBP8.77□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 103.4 ms