RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 GFRA1P56159 465 aa5.87□□□□□ -1.47
SMC1A-201ENST00000322213 RHOGP84095 191 aa5.87□□□□□ -1.47
SMC1A-201ENST00000322213 FAM90A1Q86YD7 464 aa5.87□□□□□ -1.47
SMC1A-201ENST00000322213 NAA38Q9BRA0 125 aaKnown RBP5.87□□□□□ -1.47
SMC1A-201ENST00000322213 TMEM126AQ9H061 195 aa5.87□□□□□ -1.47
SMC1A-201ENST00000322213 TNFRSF6BO95407 300 aa5.87□□□□□ -1.47
SMC1A-201ENST00000322213 WFDC3Q8IUB2 231 aa5.87□□□□□ -1.47
SMC1A-201ENST00000322213 SLC22A18ASQ8N1D0 253 aa5.87□□□□□ -1.47
SMC1A-201ENST00000322213 CLEC7AQ9BXN2 247 aa5.87□□□□□ -1.47
SMC1A-201ENST00000322213 COLQQ9Y215 455 aaPredicted RBP5.87□□□□□ -1.47
SMC1A-201ENST00000322213 BPTFQ12830 3046 aa5.86□□□□□ -1.47
SMC1A-201ENST00000322213 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.86□□□□□ -1.47
SMC1A-201ENST00000322213 YPEL1O60688 119 aa5.86□□□□□ -1.47
SMC1A-201ENST00000322213 MAGEA5P43359 124 aa5.86□□□□□ -1.47
SMC1A-201ENST00000322213 YPEL2Q96QA6 119 aa5.86□□□□□ -1.47
SMC1A-201ENST00000322213 SRXN1Q9BYN0 137 aa5.86□□□□□ -1.47
SMC1A-201ENST00000322213 ACANP16112 2415 aa5.86□□□□□ -1.47
SMC1A-201ENST00000322213 SFTA2Q6UW10 78 aa5.86□□□□□ -1.47
SMC1A-201ENST00000322213 LYZL4Q96KX0 146 aa5.86□□□□□ -1.47
SMC1A-201ENST00000322213 CEP295Q9C0D2 2601 aa5.86□□□□□ -1.47
SMC1A-201ENST00000322213 IGHV1-24A0A0C4DH33 117 aa5.86□□□□□ -1.47
SMC1A-201ENST00000322213 H7C1H1 209 aa5.86□□□□□ -1.47
SMC1A-201ENST00000322213 LOXL3P58215 753 aa5.86□□□□□ -1.47
SMC1A-201ENST00000322213 A0A1W2PRD5 423 aa5.86□□□□□ -1.47
SMC1A-201ENST00000322213 A0A1W2PRF3 423 aa5.86□□□□□ -1.47
SMC1A-201ENST00000322213 A0A1W2PRM7 423 aa5.86□□□□□ -1.47
SMC1A-201ENST00000322213 ASCL4Q6XD76 172 aa5.86□□□□□ -1.47
SMC1A-201ENST00000322213 IGKV1D-43A0A0B4J1Z2 117 aa5.86□□□□□ -1.47
SMC1A-201ENST00000322213 PRRG2O14669 202 aa5.86□□□□□ -1.47
SMC1A-201ENST00000322213 WNT9BO14905 357 aa5.86□□□□□ -1.47
SMC1A-201ENST00000322213 YPEL3P61236 119 aaPredicted RBP5.86□□□□□ -1.47
SMC1A-201ENST00000322213 CEND1Q8N111 149 aa5.86□□□□□ -1.47
SMC1A-201ENST00000322213 EDA2RQ9HAV5 297 aa5.86□□□□□ -1.47
SMC1A-201ENST00000322213 IDI2-AS1Q9NZ38 188 aa5.86□□□□□ -1.47
SMC1A-201ENST00000322213 TRAV24A0A0B4J272 114 aa5.86□□□□□ -1.47
SMC1A-201ENST00000322213 IGHV5-10-1A0A0J9YXX1 117 aa5.86□□□□□ -1.47
SMC1A-201ENST00000322213 UBE2L6O14933 153 aa5.86□□□□□ -1.47
SMC1A-201ENST00000322213 ZNF688P0C7X2 276 aa5.86□□□□□ -1.47
SMC1A-201ENST00000322213 OVOL2Q9BRP0 275 aa5.86□□□□□ -1.47
SMC1A-201ENST00000322213 IGHV1-45A0A0A0MS14 117 aa5.86□□□□□ -1.47
SMC1A-201ENST00000322213 SELENOKQ9Y6D0 94 aa5.86□□□□□ -1.47
SMC1A-201ENST00000322213 H3BMM0 161 aa5.86□□□□□ -1.47
SMC1A-201ENST00000322213 TDRG1Q3Y452 100 aa5.86□□□□□ -1.47
SMC1A-201ENST00000322213 SLC25A53Q5H9E4 307 aa5.86□□□□□ -1.47
SMC1A-201ENST00000322213 UBE2WQ96B02 151 aa5.86□□□□□ -1.47
SMC1A-201ENST00000322213 ASCL2Q99929 193 aa5.86□□□□□ -1.47
SMC1A-201ENST00000322213 TRBV6-6A0A0A6YYG2 114 aa5.85□□□□□ -1.47
SMC1A-201ENST00000322213 FOXI3A8MTJ6 420 aaPredicted RBP5.85□□□□□ -1.47
SMC1A-201ENST00000322213 MFAP4P55083 255 aa5.85□□□□□ -1.47
SMC1A-201ENST00000322213 CHCHD2P9Q5T1J5 151 aaPredicted RBP5.85□□□□□ -1.47
SMC1A-201ENST00000322213 C9orf153Q5TBE3 101 aa5.85□□□□□ -1.47
SMC1A-201ENST00000322213 COL27A1Q8IZC6 1860 aaPredicted RBP5.85□□□□□ -1.47
SMC1A-201ENST00000322213 NPIPB3Q92617 1050 aa5.85□□□□□ -1.47
SMC1A-201ENST00000322213 CENPEQ02224 2701 aa5.85□□□□□ -1.47
SMC1A-201ENST00000322213 A0A0J9YW62 118 aa5.85□□□□□ -1.47
SMC1A-201ENST00000322213 C12orf77C9JDV5 145 aa5.85□□□□□ -1.47
SMC1A-201ENST00000322213 STPG1Q5TH74 334 aa5.85□□□□□ -1.47
SMC1A-201ENST00000322213 TEX45Q8NA69 505 aa5.85□□□□□ -1.47
SMC1A-201ENST00000322213 PGPEP1Q9NXJ5 209 aa5.85□□□□□ -1.47
SMC1A-201ENST00000322213 ERG28Q9UKR5 140 aa5.85□□□□□ -1.47
SMC1A-201ENST00000322213 M0R2P5 195 aa5.85□□□□□ -1.47
SMC1A-201ENST00000322213 COX7A1P24310 79 aa5.85□□□□□ -1.47
SMC1A-201ENST00000322213 PHF7Q9BWX1 381 aaPredicted RBP5.85□□□□□ -1.47
SMC1A-201ENST00000322213 NPFFR1Q9GZQ6 430 aa5.85□□□□□ -1.47
SMC1A-201ENST00000322213 IGLL1P15814 213 aa5.85□□□□□ -1.47
SMC1A-201ENST00000322213 IFI27P40305 119 aaPredicted RBP5.85□□□□□ -1.47
SMC1A-201ENST00000322213 C19orf54Q5BKX5 351 aa5.85□□□□□ -1.47
SMC1A-201ENST00000322213 GUSBP11Q6P575 273 aa5.85□□□□□ -1.47
SMC1A-201ENST00000322213 OR9G1Q8NH87 305 aa5.85□□□□□ -1.47
SMC1A-201ENST00000322213 KLF14Q8TD94 323 aaPredicted RBP5.85□□□□□ -1.47
SMC1A-201ENST00000322213 R4GN57 208 aa5.85□□□□□ -1.47
SMC1A-201ENST00000322213 SAA2-SAA4A0A096LPE2 208 aa5.85□□□□□ -1.47
SMC1A-201ENST00000322213 SAA2P0DJI9 122 aaPredicted RBP5.85□□□□□ -1.47
SMC1A-201ENST00000322213 ETDBQ3ZM63 59 aa5.85□□□□□ -1.47
SMC1A-201ENST00000322213 ZNF441Q8N8Z8 693 aa5.85□□□□□ -1.47
SMC1A-201ENST00000322213 MEIG1Q5JSS6 88 aa5.85□□□□□ -1.47
SMC1A-201ENST00000322213 COL4A4P53420 1690 aaPredicted RBP5.85□□□□□ -1.47
SMC1A-201ENST00000322213 FOXH1O75593 365 aa5.85□□□□□ -1.47
SMC1A-201ENST00000322213 SP9P0CG40 484 aa5.85□□□□□ -1.47
SMC1A-201ENST00000322213 ZNF56Q15929 161 aa5.85□□□□□ -1.47
SMC1A-201ENST00000322213 WIPF2Q8TF74 440 aaPredicted RBP5.85□□□□□ -1.47
SMC1A-201ENST00000322213 TRBV7-9A0A0J9YWB2 115 aa5.84□□□□□ -1.47
SMC1A-201ENST00000322213 ASIPP42127 132 aa5.84□□□□□ -1.47
SMC1A-201ENST00000322213 TEX48A0A1B0GUV7 120 aa5.84□□□□□ -1.47
SMC1A-201ENST00000322213 IGLC7A0M8Q6 106 aa5.84□□□□□ -1.47
SMC1A-201ENST00000322213 FCN3O75636 299 aa5.84□□□□□ -1.47
SMC1A-201ENST00000322213 RNASE1P07998 156 aaKnown RBP5.84□□□□□ -1.47
SMC1A-201ENST00000322213 WDR83OSQ9Y284 106 aa5.84□□□□□ -1.47
SMC1A-201ENST00000322213 V9GYV3 84 aa5.84□□□□□ -1.47
SMC1A-201ENST00000322213 DUTP33316 252 aaKnown RBP5.84□□□□□ -1.47
SMC1A-201ENST00000322213 ECSCRQ19T08 205 aa5.84□□□□□ -1.47
SMC1A-201ENST00000322213 J3KT08 172 aa5.84□□□□□ -1.47
SMC1A-201ENST00000322213 EVI2AP22794 236 aa5.84□□□□□ -1.47
SMC1A-201ENST00000322213 RPL15P61313 204 aaKnown RBP5.84□□□□□ -1.47
SMC1A-201ENST00000322213 C2orf82Q6UX34 121 aa5.84□□□□□ -1.47
SMC1A-201ENST00000322213 PLA2G2FQ9BZM2 168 aa5.84□□□□□ -1.47
SMC1A-201ENST00000322213 FSCN3Q9NQT6 498 aa5.84□□□□□ -1.47
SMC1A-201ENST00000322213 A0A1W2PQF6 199 aa5.84□□□□□ -1.48
SMC1A-201ENST00000322213 PRTN3P24158 256 aa5.84□□□□□ -1.48
SMC1A-201ENST00000322213 PRCDQ00LT1 54 aa5.84□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms